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The map label for this gene is yjfH [C]

Identifier: 50841866

GI number: 50841866

Start: 430312

End: 431268

Strand: Reverse

Name: yjfH [C]

Synonym: PPA0383

Alternate gene names: 50841866

Gene position: 431268-430312 (Counterclockwise)

Preceding gene: 50841867

Following gene: 50841863

Centisome position: 16.84

GC content: 65.52

Gene sequence:

>957_bases
ATGGCAAGAAATTCTCAGCGGCGCGGCGCAGGGCACAAGGGCAAGAGTTCGGCTGTTGGCTCTGGCGGACGAGGCCGCAA
GGCTCTCAAAGGCCGAGGCCCCACCCCCAAGGCGGAGGACCGCGTTTACCACAAGGCGTATAAGGCCAAGCAGGAGAGGT
TGGCCCGCGCCGCGGCCCGCAAACCGGCGAAGTCCAAAGGGGCAGGCCCGGAGTGGGTCATCGGTCGCAATCCTGTACTC
GAGGCCCTTCACGTCGGCCTTCCAGTACGCACTGCTTACGTCGCCGAAGGAGCTGAGCATGACTCGCGGCTGAGGGAGAT
CCTCACCTTCGCTGCTGATCATGGCATCGCATTGATGCAGGCCACTCGTGGCGAACTCGACCGTATGACAGGTGGGTCCA
ACCATCAGGGAGTGGCCCTGCGCCTACCCGAATACGAGTACGCGACCGTGGACGACCTTATCGCAGCTGGCAACCAGACC
TACCACGGTGGGCTCATAGTAGCCCTCGACAAGGTCACCGATCCGCGCAATCTGGGGGCGATCATCCGCTCGGCTGCCGC
CTTTGGTGCTCAGGGGGTGCTCATCCCGTCGCGTCGCTCGGCCTCGATGACGGCAGCGGCGTGGAAGACCTCAGCTGGGG
CAGCCGCACGCGTACCGGTGGCGATGGCCTCGAACCTCAACCAGGCCCTCGGCAAGTTCGCTGCGACTGGCTGGATGATC
GTCGGGCTGGCCGGTGAGGCCGACTCCGACATCGCCGCCGCTCCGGGTCTGGACGGCCCGCTGGTGCTCGTCGTCGGCTC
AGAGGGAGAGGGCTTGGCCCGTCTCACCCGGCAGTCCTGCGACGTGCTGACGTCGATCCCGATCAGCAGTGATGTCGAAT
CCCTCAACGCCTCGGTGGCAGCGTCGATCGCGCTGTACGAGGCGTCGAGGGTGCGTGTGAGTGCATCGGAGGACTGA

Upstream 100 bases:

>100_bases
ACAGCTGACGCCATCCGCGACACCTTGACAAACCTTGGATTGACGATCGAGGACACCCCCGCTGGCGCCCATTGGTCGCT
GAGCTGACAAGGAGACTGAC

Downstream 100 bases:

>100_bases
GGCTCACGGCGGGCTGTCCCGGGAAGGTCACCGTCACCGAGTCGTCAGCCACGTCGATCTGCGGATGGGGGCCACACATC
CCGAGCCCGACGAGGGCGAT

Product: putative tRNA/rRNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MARNSQRRGAGHKGKSSAVGSGGRGRKALKGRGPTPKAEDRVYHKAYKAKQERLARAAARKPAKSKGAGPEWVIGRNPVL
EALHVGLPVRTAYVAEGAEHDSRLREILTFAADHGIALMQATRGELDRMTGGSNHQGVALRLPEYEYATVDDLIAAGNQT
YHGGLIVALDKVTDPRNLGAIIRSAAAFGAQGVLIPSRRSASMTAAAWKTSAGAAARVPVAMASNLNQALGKFAATGWMI
VGLAGEADSDIAAAPGLDGPLVLVVGSEGEGLARLTRQSCDVLTSIPISSDVESLNASVAASIALYEASRVRVSASED

Sequences:

>Translated_318_residues
MARNSQRRGAGHKGKSSAVGSGGRGRKALKGRGPTPKAEDRVYHKAYKAKQERLARAAARKPAKSKGAGPEWVIGRNPVL
EALHVGLPVRTAYVAEGAEHDSRLREILTFAADHGIALMQATRGELDRMTGGSNHQGVALRLPEYEYATVDDLIAAGNQT
YHGGLIVALDKVTDPRNLGAIIRSAAAFGAQGVLIPSRRSASMTAAAWKTSAGAAARVPVAMASNLNQALGKFAATGWMI
VGLAGEADSDIAAAPGLDGPLVLVVGSEGEGLARLTRQSCDVLTSIPISSDVESLNASVAASIALYEASRVRVSASED
>Mature_317_residues
ARNSQRRGAGHKGKSSAVGSGGRGRKALKGRGPTPKAEDRVYHKAYKAKQERLARAAARKPAKSKGAGPEWVIGRNPVLE
ALHVGLPVRTAYVAEGAEHDSRLREILTFAADHGIALMQATRGELDRMTGGSNHQGVALRLPEYEYATVDDLIAAGNQTY
HGGLIVALDKVTDPRNLGAIIRSAAAFGAQGVLIPSRRSASMTAAAWKTSAGAAARVPVAMASNLNQALGKFAATGWMIV
GLAGEADSDIAAAPGLDGPLVLVVGSEGEGLARLTRQSCDVLTSIPISSDVESLNASVAASIALYEASRVRVSASED

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Homo sapiens, GI40068479, Length=215, Percent_Identity=31.6279069767442, Blast_Score=93, Evalue=4e-19,
Organism=Escherichia coli, GI1790623, Length=226, Percent_Identity=40.2654867256637, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI1788935, Length=211, Percent_Identity=29.8578199052133, Blast_Score=80, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17555908, Length=286, Percent_Identity=33.2167832167832, Blast_Score=109, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004441
- InterPro:   IPR001537
- InterPro:   IPR013123 [H]

Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 33019; Mature: 32888

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARNSQRRGAGHKGKSSAVGSGGRGRKALKGRGPTPKAEDRVYHKAYKAKQERLARAAAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
KPAKSKGAGPEWVIGRNPVLEALHVGLPVRTAYVAEGAEHDSRLREILTFAADHGIALMQ
CCCCCCCCCCCEEECCCHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEH
ATRGELDRMTGGSNHQGVALRLPEYEYATVDDLIAAGNQTYHGGLIVALDKVTDPRNLGA
HHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCEECCCEEEEEECCCCCHHHHH
IIRSAAAFGAQGVLIPSRRSASMTAAAWKTSAGAAARVPVAMASNLNQALGKFAATGWMI
HHHHHHHHCCCCEEECCCCCCCEEHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHCCEEE
VGLAGEADSDIAAAPGLDGPLVLVVGSEGEGLARLTRQSCDVLTSIPISSDVESLNASVA
EEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ASIALYEASRVRVSASED
HHHEEEECCEEEEECCCC
>Mature Secondary Structure 
ARNSQRRGAGHKGKSSAVGSGGRGRKALKGRGPTPKAEDRVYHKAYKAKQERLARAAAR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
KPAKSKGAGPEWVIGRNPVLEALHVGLPVRTAYVAEGAEHDSRLREILTFAADHGIALMQ
CCCCCCCCCCCEEECCCHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEH
ATRGELDRMTGGSNHQGVALRLPEYEYATVDDLIAAGNQTYHGGLIVALDKVTDPRNLGA
HHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCEECCCEEEEEECCCCCHHHHH
IIRSAAAFGAQGVLIPSRRSASMTAAAWKTSAGAAARVPVAMASNLNQALGKFAATGWMI
HHHHHHHHCCCCEEECCCCCCCEEHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHCCEEE
VGLAGEADSDIAAAPGLDGPLVLVVGSEGEGLARLTRQSCDVLTSIPISSDVESLNASVA
EEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ASIALYEASRVRVSASED
HHHEEEECCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA