| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841865
Identifier: 50841865
GI number: 50841865
Start: 429195
End: 430067
Strand: Direct
Name: 50841865
Synonym: PPA0382
Alternate gene names: NA
Gene position: 429195-430067 (Clockwise)
Preceding gene: 50841864
Following gene: 50841868
Centisome position: 16.76
GC content: 64.15
Gene sequence:
>873_bases TTGAGGACGTCCCCTTCCTCGTCGGAGCTGATCTGGACGGCCACGGAGGTACCGCTCCTCTCATCCAGGGACGTAGCCTC ATCTACCGGTGGTGCACCTGCGCGCCGCTGTGGGCCGGAACCTTCATGGGTGTTTCTCCAGTGTCCCCCCGGACTGACGA GGCGTATCTGCTCGGGAACCGTAAGGCATTTCCTCGATCGAGGAGCGGGCGCTGACGGCATCCTCACCATGGGCTGGTTC GGGGAATTCCGCCCGATGGCCCAGTTCTACTTCGGTGTGGGATCCCCCTACTGGGCCTCCAAGGGGATGCTCGGTCTAGC CCTGCCTGCCGACCACCTGGTATGGGCAGCTGAGGAGGAGGCTCTGCCGGTGGAGAAGGAGGACACCCATCGCCTCATTT CCACGCCGGGATGGATGGTCAGCGGAACGTCAGCCGACGGCGTGGTTCGTGTGCTCAACATCGGTACCGATGGTGAGAAC GAGGCAGACCTTGTCAGTGAGGCACCCCTGTACACGTCTCTCGGCTTTTCCACCGTGACGGCCCCAGCACAGGCGGGGGA GTGGACCCTGCAACCTGTTGCCAATGTGGTCGCTCTGCGCGATGCGAAGGGGCGGGTTTCGTGCAGATCGGGCCAGCACG TCGACCGGTTGGAACAGCTCGGGGACGTCCTCGTCGGGCAATCCTCCTGGCAGGTTCACTGGATCAAGGTCGAACCGGAT TCCCAAGTGGGCTACGGCGCGCGTGGTGAGTCCGACCTGGGCCCGCGCATCGTGTGTGCCCAGGTCTGTCACCAAGGAAT CGAGGTGCGTTGTGCCTGGTTCGACGAGGACGTACCGGTGGCATCCGTCGTCGTGGCCGGGTTGGCCGACTGA
Upstream 100 bases:
>100_bases GCCATGGAGACTCTGCCGGCCCTGTGGACCCTCATGGACCCGACCTGGGATCTTAGCAGAGACTTCGCCACCGTTCACGG GCCCAGGTTGAGGAGATACC
Downstream 100 bases:
>100_bases CCCCGAACAGGGACCGGATTCCTTCCTCGAACCAGTGACGCCGTGGCAGTACAGGCAACGGCTGACGGCTCAGGCGGTCA CGGGGCTGTCAGAGGCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MRTSPSSSELIWTATEVPLLSSRDVASSTGGAPARRCGPEPSWVFLQCPPGLTRRICSGTVRHFLDRGAGADGILTMGWF GEFRPMAQFYFGVGSPYWASKGMLGLALPADHLVWAAEEEALPVEKEDTHRLISTPGWMVSGTSADGVVRVLNIGTDGEN EADLVSEAPLYTSLGFSTVTAPAQAGEWTLQPVANVVALRDAKGRVSCRSGQHVDRLEQLGDVLVGQSSWQVHWIKVEPD SQVGYGARGESDLGPRIVCAQVCHQGIEVRCAWFDEDVPVASVVVAGLAD
Sequences:
>Translated_290_residues MRTSPSSSELIWTATEVPLLSSRDVASSTGGAPARRCGPEPSWVFLQCPPGLTRRICSGTVRHFLDRGAGADGILTMGWF GEFRPMAQFYFGVGSPYWASKGMLGLALPADHLVWAAEEEALPVEKEDTHRLISTPGWMVSGTSADGVVRVLNIGTDGEN EADLVSEAPLYTSLGFSTVTAPAQAGEWTLQPVANVVALRDAKGRVSCRSGQHVDRLEQLGDVLVGQSSWQVHWIKVEPD SQVGYGARGESDLGPRIVCAQVCHQGIEVRCAWFDEDVPVASVVVAGLAD >Mature_290_residues MRTSPSSSELIWTATEVPLLSSRDVASSTGGAPARRCGPEPSWVFLQCPPGLTRRICSGTVRHFLDRGAGADGILTMGWF GEFRPMAQFYFGVGSPYWASKGMLGLALPADHLVWAAEEEALPVEKEDTHRLISTPGWMVSGTSADGVVRVLNIGTDGEN EADLVSEAPLYTSLGFSTVTAPAQAGEWTLQPVANVVALRDAKGRVSCRSGQHVDRLEQLGDVLVGQSSWQVHWIKVEPD SQVGYGARGESDLGPRIVCAQVCHQGIEVRCAWFDEDVPVASVVVAGLAD
Specific function: Unknown
COG id: COG4289
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31047; Mature: 31047
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSPSSSELIWTATEVPLLSSRDVASSTGGAPARRCGPEPSWVFLQCPPGLTRRICSGT CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCHHHHHHHHH VRHFLDRGAGADGILTMGWFGEFRPMAQFYFGVGSPYWASKGMLGLALPADHLVWAAEEE HHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHCCCCEEEECCCCCEEEECCCC ALPVEKEDTHRLISTPGWMVSGTSADGVVRVLNIGTDGENEADLVSEAPLYTSLGFSTVT CCCCCCCCCHHEECCCCEEEECCCCCCEEEEEEECCCCCCCHHHHHCCCCCEECCCHHEE APAQAGEWTLQPVANVVALRDAKGRVSCRSGQHVDRLEQLGDVLVGQSSWQVHWIKVEPD CCCCCCCEEHHHHHHHHHEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCC SQVGYGARGESDLGPRIVCAQVCHQGIEVRCAWFDEDVPVASVVVAGLAD CCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCC >Mature Secondary Structure MRTSPSSSELIWTATEVPLLSSRDVASSTGGAPARRCGPEPSWVFLQCPPGLTRRICSGT CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCHHHHHHHHH VRHFLDRGAGADGILTMGWFGEFRPMAQFYFGVGSPYWASKGMLGLALPADHLVWAAEEE HHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHCCCCEEEECCCCCEEEECCCC ALPVEKEDTHRLISTPGWMVSGTSADGVVRVLNIGTDGENEADLVSEAPLYTSLGFSTVT CCCCCCCCCHHEECCCCEEEECCCCCCEEEEEEECCCCCCCHHHHHCCCCCEECCCHHEE APAQAGEWTLQPVANVVALRDAKGRVSCRSGQHVDRLEQLGDVLVGQSSWQVHWIKVEPD CCCCCCCEEHHHHHHHHHEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCC SQVGYGARGESDLGPRIVCAQVCHQGIEVRCAWFDEDVPVASVVVAGLAD CCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA