| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841864
Identifier: 50841864
GI number: 50841864
Start: 428537
End: 429409
Strand: Direct
Name: 50841864
Synonym: PPA0381
Alternate gene names: NA
Gene position: 428537-429409 (Clockwise)
Preceding gene: 50841862
Following gene: 50841865
Centisome position: 16.74
GC content: 64.26
Gene sequence:
>873_bases ATGACGCAGAGGAGTCCACTGACCCATTGGGGACGCGAGGACTGGTGCAATCTCGCTGATCGTCTGGTGACGACGGCCAT GAGCCATGCAACACCAGGCCACGGGCGGATTGTGATGCCGGGGGAACCGGGCGGACTGGGCCCTGACATCGACGGGCTCG AAGAGTTGGCGTCGTGGTGGGCCGGAGGCGTCGCCGCCGGCGTCGACCAGAGGGCCGAGGATCGCTGGCTGCGACCATCT GAACATTGGCAGGCCGTTGTCGAGGCCTGTTCATTGGCCCTGACGCTCCACTTCACCAAGCCCTGGATCTGGGATCAGCT CTCTCAGCGGACCCAGGAGCAGGCCGTCGAGTGGTTTCAGGACGTGCGCAATCCCGAGATCCCCGACAACAACTGGATCT GGTTCCAGGTCATCGTCGAGACCTTCCTGCGAGGCCTCGGTGCCGACTGGGACGAGGCCCTCGTCCGCGAGCACCTCGAA CGTCACGAGGACTGGTACCGCACCGACGGTTGGATCAGCGACGGACCGAGGCGCTGCTACGACCACTATGTCGGATGGGC CATGGAGACTCTGCCGGCCCTGTGGACCCTCATGGACCCGACCTGGGATCTTAGCAGAGACTTCGCCACCGTTCACGGGC CCAGGTTGAGGAGATACCTTGAGGACGTCCCCTTCCTCGTCGGAGCTGATCTGGACGGCCACGGAGGTACCGCTCCTCTC ATCCAGGGACGTAGCCTCATCTACCGGTGGTGCACCTGCGCGCCGCTGTGGGCCGGAACCTTCATGGGTGTTTCTCCAGT GTCCCCCCGGACTGACGAGGCGTATCTGCTCGGGAACCGTAAGGCATTTCCTCGATCGAGGAGCGGGCGCTGA
Upstream 100 bases:
>100_bases ACATTACAGGAAAGCGGTTACCATTGTCACCAGTTGGACATCATATTTTTGATCCTCGAATTACGCGACAGTTCGATGGT GAGCGGCAGGGTGTGATGAC
Downstream 100 bases:
>100_bases CGGCATCCTCACCATGGGCTGGTTCGGGGAATTCCGCCCGATGGCCCAGTTCTACTTCGGTGTGGGATCCCCCTACTGGG CCTCCAAGGGGATGCTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTQRSPLTHWGREDWCNLADRLVTTAMSHATPGHGRIVMPGEPGGLGPDIDGLEELASWWAGGVAAGVDQRAEDRWLRPS EHWQAVVEACSLALTLHFTKPWIWDQLSQRTQEQAVEWFQDVRNPEIPDNNWIWFQVIVETFLRGLGADWDEALVREHLE RHEDWYRTDGWISDGPRRCYDHYVGWAMETLPALWTLMDPTWDLSRDFATVHGPRLRRYLEDVPFLVGADLDGHGGTAPL IQGRSLIYRWCTCAPLWAGTFMGVSPVSPRTDEAYLLGNRKAFPRSRSGR
Sequences:
>Translated_290_residues MTQRSPLTHWGREDWCNLADRLVTTAMSHATPGHGRIVMPGEPGGLGPDIDGLEELASWWAGGVAAGVDQRAEDRWLRPS EHWQAVVEACSLALTLHFTKPWIWDQLSQRTQEQAVEWFQDVRNPEIPDNNWIWFQVIVETFLRGLGADWDEALVREHLE RHEDWYRTDGWISDGPRRCYDHYVGWAMETLPALWTLMDPTWDLSRDFATVHGPRLRRYLEDVPFLVGADLDGHGGTAPL IQGRSLIYRWCTCAPLWAGTFMGVSPVSPRTDEAYLLGNRKAFPRSRSGR >Mature_289_residues TQRSPLTHWGREDWCNLADRLVTTAMSHATPGHGRIVMPGEPGGLGPDIDGLEELASWWAGGVAAGVDQRAEDRWLRPSE HWQAVVEACSLALTLHFTKPWIWDQLSQRTQEQAVEWFQDVRNPEIPDNNWIWFQVIVETFLRGLGADWDEALVREHLER HEDWYRTDGWISDGPRRCYDHYVGWAMETLPALWTLMDPTWDLSRDFATVHGPRLRRYLEDVPFLVGADLDGHGGTAPLI QGRSLIYRWCTCAPLWAGTFMGVSPVSPRTDEAYLLGNRKAFPRSRSGR
Specific function: Unknown
COG id: COG4289
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33200; Mature: 33068
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRSPLTHWGREDWCNLADRLVTTAMSHATPGHGRIVMPGEPGGLGPDIDGLEELASWW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH AGGVAAGVDQRAEDRWLRPSEHWQAVVEACSLALTLHFTKPWIWDQLSQRTQEQAVEWFQ HCHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH DVRNPEIPDNNWIWFQVIVETFLRGLGADWDEALVREHLERHEDWYRTDGWISDGPRRCY HHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH DHYVGWAMETLPALWTLMDPTWDLSRDFATVHGPRLRRYLEDVPFLVGADLDGHGGTAPL HHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHCCHHHHHHHHHCCEEEECCCCCCCCCCHH IQGRSLIYRWCTCAPLWAGTFMGVSPVSPRTDEAYLLGNRKAFPRSRSGR HHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure TQRSPLTHWGREDWCNLADRLVTTAMSHATPGHGRIVMPGEPGGLGPDIDGLEELASWW CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH AGGVAAGVDQRAEDRWLRPSEHWQAVVEACSLALTLHFTKPWIWDQLSQRTQEQAVEWFQ HCHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHH DVRNPEIPDNNWIWFQVIVETFLRGLGADWDEALVREHLERHEDWYRTDGWISDGPRRCY HHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH DHYVGWAMETLPALWTLMDPTWDLSRDFATVHGPRLRRYLEDVPFLVGADLDGHGGTAPL HHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHCCHHHHHHHHHCCEEEECCCCCCCCCCHH IQGRSLIYRWCTCAPLWAGTFMGVSPVSPRTDEAYLLGNRKAFPRSRSGR HHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA