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The map label for this gene is ygfZ [C]

Identifier: 50841834

GI number: 50841834

Start: 399015

End: 399956

Strand: Direct

Name: ygfZ [C]

Synonym: PPA0348

Alternate gene names: 50841834

Gene position: 399015-399956 (Clockwise)

Preceding gene: 50841833

Following gene: 50841835

Centisome position: 15.58

GC content: 64.23

Gene sequence:

>942_bases
ATGTCTGATCCGGTATTGCTGACCGACGGTCCGGACACCGGTCTGGTCTCCCACATGAGGAACCCGATCGCTGAGCAGCG
CCTGATGGTCGACGGAGGTGGGAGCGTCGAGCTATCCAATCGCGAGGTGCTGGCAATCTCCGGTGTCGACCGGCTGGGCT
GGCTGCACTCTTTGACGTCACAGTTTCTTGACGGCATGGAACCGGGGCGCACTACGACGAGCCTCGTATTATCGCCGACC
GGCCATGTTGAGCACGTCTTGCACGGCGTTGATGATGGCCAGACCTTTTGGGCCTGGACGGAGCCGGGTCGCGGGGCTGA
TCTGGCGGCGTGGCTGGACTCCATGCGCTTCATGATGAGGGTCGAAGTTGCGTTGCGCCCGGACATGACCGTCCGATGGT
TCGGCCATGACGTCGCCGTTTCCGATGGCGTGGTCCTCGACTCGGAGGTGGCCGGTGGACACGAGGTGATCCTGCCCGTT
GACGCCGAGATCCCTGGGGATGCCGATCCGGTCGGGGTGCTGGCCTGGGAGGCGTTACGGATTGCTGCCGGCATTCCGCG
GATTGGGCTGGATACCGACGATCGAACCATCCCTAATGAGATTGGTCTCTACGGCACTCATATGGATAAAGGGTGTTACC
GCGGCCAGGAGACGGTTGCCCGGGTGTACAACCTGGGGCGCCCGCCGCGTCGGTTGACTCTGCTGCAGCTCGACGGCTCC
CGCGCCGAACTTCCCGAGGTCGGTGCCGACATCCACGCTGGTGGGCGTCGGGTCGGGGCCATGGGGTCGTCCGCCAACCA
TGGCGTCGACGGTCCGATCGGTTTGGCCCTAGTGCGTCGTGGTGTCGATGTCGGTCTGGAGCTGGAAGTCGACGGGATCG
CGGCGGGTCAGCAGCCCCTCGTCGATCCTGAAGTTGGCTTGCACGTCTGCCCGGTAGTGTGA

Upstream 100 bases:

>100_bases
TATGGTCAGGTCGAAGGCGATCTGTTATGGACCTTCGACCGGGCCACCGTCGATGCCCCCCTGCAGCCCTACATGTGGGC
TCGCCTCAAGAGGTCTTGAG

Downstream 100 bases:

>100_bases
GTCTGTGCCCCTGTGCCCACCAGGGTCGAGGAGGAAGTACGTGAAGAAGGATTATTTCAACCGCACCCAGAAATTGGTGA
CGGTCCTCATTGACGCCATC

Product: putative glycine cleavage T-protein

Products: NA

Alternate protein names: Aminomethyltransferase; Glycine Cleavage T-Protein; Glycine Cleavage System T Protein; Glycine Cleavage System T Protein Aminomethyltransferase; Glycine Cleavage T-Protein C-Terminal Barrel; Aminomethyl Transferase; Glycine Cleavage T-Protein Aminomethyl Transferase; Glycine Cleavage Protein T; Aminomethyltransferase Protein; Aminomethyltransferase Related GcvT; Glycine Cleavage T-Protein Barrel

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSDPVLLTDGPDTGLVSHMRNPIAEQRLMVDGGGSVELSNREVLAISGVDRLGWLHSLTSQFLDGMEPGRTTTSLVLSPT
GHVEHVLHGVDDGQTFWAWTEPGRGADLAAWLDSMRFMMRVEVALRPDMTVRWFGHDVAVSDGVVLDSEVAGGHEVILPV
DAEIPGDADPVGVLAWEALRIAAGIPRIGLDTDDRTIPNEIGLYGTHMDKGCYRGQETVARVYNLGRPPRRLTLLQLDGS
RAELPEVGADIHAGGRRVGAMGSSANHGVDGPIGLALVRRGVDVGLELEVDGIAAGQQPLVDPEVGLHVCPVV

Sequences:

>Translated_313_residues
MSDPVLLTDGPDTGLVSHMRNPIAEQRLMVDGGGSVELSNREVLAISGVDRLGWLHSLTSQFLDGMEPGRTTTSLVLSPT
GHVEHVLHGVDDGQTFWAWTEPGRGADLAAWLDSMRFMMRVEVALRPDMTVRWFGHDVAVSDGVVLDSEVAGGHEVILPV
DAEIPGDADPVGVLAWEALRIAAGIPRIGLDTDDRTIPNEIGLYGTHMDKGCYRGQETVARVYNLGRPPRRLTLLQLDGS
RAELPEVGADIHAGGRRVGAMGSSANHGVDGPIGLALVRRGVDVGLELEVDGIAAGQQPLVDPEVGLHVCPVV
>Mature_312_residues
SDPVLLTDGPDTGLVSHMRNPIAEQRLMVDGGGSVELSNREVLAISGVDRLGWLHSLTSQFLDGMEPGRTTTSLVLSPTG
HVEHVLHGVDDGQTFWAWTEPGRGADLAAWLDSMRFMMRVEVALRPDMTVRWFGHDVAVSDGVVLDSEVAGGHEVILPVD
AEIPGDADPVGVLAWEALRIAAGIPRIGLDTDDRTIPNEIGLYGTHMDKGCYRGQETVARVYNLGRPPRRLTLLQLDGSR
AELPEVGADIHAGGRRVGAMGSSANHGVDGPIGLALVRRGVDVGLELEVDGIAAGQQPLVDPEVGLHVCPVV

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33347; Mature: 33216

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPVLLTDGPDTGLVSHMRNPIAEQRLMVDGGGSVELSNREVLAISGVDRLGWLHSLTS
CCCCEEEECCCCCHHHHHHHCCHHHCEEEEECCCEEEECCCEEEEEECCHHHHHHHHHHH
QFLDGMEPGRTTTSLVLSPTGHVEHVLHGVDDGQTFWAWTEPGRGADLAAWLDSMRFMMR
HHHCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
VEVALRPDMTVRWFGHDVAVSDGVVLDSEVAGGHEVILPVDAEIPGDADPVGVLAWEALR
EEEEECCCCEEEEECCEEEECCCEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHH
IAAGIPRIGLDTDDRTIPNEIGLYGTHMDKGCYRGQETVARVYNLGRPPRRLTLLQLDGS
HHHCCCCCCCCCCCCCCCHHCCEEECCCCCHHHCCHHHHHHHHHCCCCCCEEEEEEECCC
RAELPEVGADIHAGGRRVGAMGSSANHGVDGPIGLALVRRGVDVGLELEVDGIAAGQQPL
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCC
VDPEVGLHVCPVV
CCCCCCEEECCCC
>Mature Secondary Structure 
SDPVLLTDGPDTGLVSHMRNPIAEQRLMVDGGGSVELSNREVLAISGVDRLGWLHSLTS
CCCEEEECCCCCHHHHHHHCCHHHCEEEEECCCEEEECCCEEEEEECCHHHHHHHHHHH
QFLDGMEPGRTTTSLVLSPTGHVEHVLHGVDDGQTFWAWTEPGRGADLAAWLDSMRFMMR
HHHCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
VEVALRPDMTVRWFGHDVAVSDGVVLDSEVAGGHEVILPVDAEIPGDADPVGVLAWEALR
EEEEECCCCEEEEECCEEEECCCEEEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHH
IAAGIPRIGLDTDDRTIPNEIGLYGTHMDKGCYRGQETVARVYNLGRPPRRLTLLQLDGS
HHHCCCCCCCCCCCCCCCHHCCEEECCCCCHHHCCHHHHHHHHHCCCCCCEEEEEEECCC
RAELPEVGADIHAGGRRVGAMGSSANHGVDGPIGLALVRRGVDVGLELEVDGIAAGQQPL
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCC
VDPEVGLHVCPVV
CCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA