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The map label for this gene is ybgK [H]

Identifier: 50841773

GI number: 50841773

Start: 333537

End: 334406

Strand: Direct

Name: ybgK [H]

Synonym: PPA0284

Alternate gene names: 50841773

Gene position: 333537-334406 (Clockwise)

Preceding gene: 50841772

Following gene: 50841774

Centisome position: 13.03

GC content: 62.64

Gene sequence:

>870_bases
ATGACCCACTTCGTAGTGGAGACAGCCGGGCCGAGAACCCTCATTGAGGACGCTGGCCGTCGAGGCTGGGCGGATCTAGG
AATCAGTGGCTGCGGAGCATGGGATCGCCGGGCCTATCTGGACGGTGCTCGGCTCGTCGGTAATGGTGCTGGATTGGGGT
GTCTGGAGATTCTGCTCGGACCGGTGCGGCTGAGATGTGTCGGGGGTCCTGTCCTCGTTGCGGTGACAGGGGCGGATGCC
CAGATCGATTTGGATGGAGCGCCGCGCCCTAGCGGCTGGGGATTTCTCGTTACAGATGGTCAGACGGTGAGCATCGCCAT
GCCAGCAACCGGTTTGCGGAGCTACTTTTCTGTGACCGGAGGAATTAACGCGTCGCCCACCTTTGCCAGCGTCTCGGCTG
ATCCGACCCGTGGGATGGGCCCGGCCCCGCTGAAGGCAGGCGACCGTGTGAGCGTCGGTGATGGCCCAGCTGGTCTCATC
TCGACGACTCCTGTCGACATTCAGCAGGCACCAACGGAACTCGTCCTTCATGGGGTATGGGGACCTCGCGACGATTGGTT
TACCGATGCTGGGCGGCGTTCCCTCGAGCAGACACCGTGGCGAGTCGCACAGGCGAGCGACCGAGTGGGCACGCGGTTGG
AAGGACCTTCCCTGGAAAGAGCGGTGACCGGGGAGTTAACGAGTGAGCCGGTGATGCGAGGCGCGATCCAGGTACCTACC
TCGGGAGTGCCTCTGGTCTTTGGGCCGGACCATCCGACGACTGGAGGTTATCCAGTTATTGGGGTTGTTGATCCAGAGGA
TGCTGACCGTCTTGCTCAGGCTCGGGCAGGGGTCGTCGTGAGGTTCGCGATGACCGCTCATGACTGGTGA

Upstream 100 bases:

>100_bases
AGATTATTGGCACGACTGACGCAATCTTGTGGGATGAGAAGGCTGACCCGCCAGCTCTACTACTCCCGGGAGCCGTCATC
AGATTCGAGGTGGTGGACTC

Downstream 100 bases:

>100_bases
CGAGTATGACGTTGAAGTGTTAGCTATAAGCATAATGCCTAGTCCAAGGCTTGTTTATGACGTAATCGTGCAGGTTTCAG
TGACGATGCGGTACGTGTCC

Product: allophanate hydrolase subunit 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTHFVVETAGPRTLIEDAGRRGWADLGISGCGAWDRRAYLDGARLVGNGAGLGCLEILLGPVRLRCVGGPVLVAVTGADA
QIDLDGAPRPSGWGFLVTDGQTVSIAMPATGLRSYFSVTGGINASPTFASVSADPTRGMGPAPLKAGDRVSVGDGPAGLI
STTPVDIQQAPTELVLHGVWGPRDDWFTDAGRRSLEQTPWRVAQASDRVGTRLEGPSLERAVTGELTSEPVMRGAIQVPT
SGVPLVFGPDHPTTGGYPVIGVVDPEDADRLAQARAGVVVRFAMTAHDW

Sequences:

>Translated_289_residues
MTHFVVETAGPRTLIEDAGRRGWADLGISGCGAWDRRAYLDGARLVGNGAGLGCLEILLGPVRLRCVGGPVLVAVTGADA
QIDLDGAPRPSGWGFLVTDGQTVSIAMPATGLRSYFSVTGGINASPTFASVSADPTRGMGPAPLKAGDRVSVGDGPAGLI
STTPVDIQQAPTELVLHGVWGPRDDWFTDAGRRSLEQTPWRVAQASDRVGTRLEGPSLERAVTGELTSEPVMRGAIQVPT
SGVPLVFGPDHPTTGGYPVIGVVDPEDADRLAQARAGVVVRFAMTAHDW
>Mature_288_residues
THFVVETAGPRTLIEDAGRRGWADLGISGCGAWDRRAYLDGARLVGNGAGLGCLEILLGPVRLRCVGGPVLVAVTGADAQ
IDLDGAPRPSGWGFLVTDGQTVSIAMPATGLRSYFSVTGGINASPTFASVSADPTRGMGPAPLKAGDRVSVGDGPAGLIS
TTPVDIQQAPTELVLHGVWGPRDDWFTDAGRRSLEQTPWRVAQASDRVGTRLEGPSLERAVTGELTSEPVMRGAIQVPTS
GVPLVFGPDHPTTGGYPVIGVVDPEDADRLAQARAGVVVRFAMTAHDW

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=281, Percent_Identity=34.1637010676157, Blast_Score=139, Evalue=3e-34,
Organism=Saccharomyces cerevisiae, GI6319685, Length=304, Percent_Identity=25.6578947368421, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 30052; Mature: 29921

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHFVVETAGPRTLIEDAGRRGWADLGISGCGAWDRRAYLDGARLVGNGAGLGCLEILLG
CCEEEEECCCCHHHHHHCCCCCCHHCCCCCCCCCCCHHHCCCCEEEECCCCHHHHHHHHC
PVRLRCVGGPVLVAVTGADAQIDLDGAPRPSGWGFLVTDGQTVSIAMPATGLRSYFSVTG
CEEEEEECCEEEEEEECCCEEEECCCCCCCCCCEEEEECCCEEEEEECCHHHHHHHHHCC
GINASPTFASVSADPTRGMGPAPLKAGDRVSVGDGPAGLISTTPVDIQQAPTELVLHGVW
CCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCHHHCCCEEEEECCC
GPRDDWFTDAGRRSLEQTPWRVAQASDRVGTRLEGPSLERAVTGELTSEPVMRGAIQVPT
CCCCCHHCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEECCCCCCCHHHCCEEECCC
SGVPLVFGPDHPTTGGYPVIGVVDPEDADRLAQARAGVVVRFAMTAHDW
CCCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCEEEEEEEECCCC
>Mature Secondary Structure 
THFVVETAGPRTLIEDAGRRGWADLGISGCGAWDRRAYLDGARLVGNGAGLGCLEILLG
CEEEEECCCCHHHHHHCCCCCCHHCCCCCCCCCCCHHHCCCCEEEECCCCHHHHHHHHC
PVRLRCVGGPVLVAVTGADAQIDLDGAPRPSGWGFLVTDGQTVSIAMPATGLRSYFSVTG
CEEEEEECCEEEEEEECCCEEEECCCCCCCCCCEEEEECCCEEEEEECCHHHHHHHHHCC
GINASPTFASVSADPTRGMGPAPLKAGDRVSVGDGPAGLISTTPVDIQQAPTELVLHGVW
CCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCHHHCCCEEEEECCC
GPRDDWFTDAGRRSLEQTPWRVAQASDRVGTRLEGPSLERAVTGELTSEPVMRGAIQVPT
CCCCCHHCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEECCCCCCCHHHCCEEECCC
SGVPLVFGPDHPTTGGYPVIGVVDPEDADRLAQARAGVVVRFAMTAHDW
CCCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]