| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841719
Identifier: 50841719
GI number: 50841719
Start: 279430
End: 279966
Strand: Reverse
Name: 50841719
Synonym: PPA0226
Alternate gene names: NA
Gene position: 279966-279430 (Counterclockwise)
Preceding gene: 50841720
Following gene: 50841715
Centisome position: 10.94
GC content: 60.34
Gene sequence:
>537_bases ATGGCAGACAAGCTCCCGGTTGGCGATACGATTGACAACCTTAAGACTGACGGCCAGAAGTTGGTCCAGGACTCCAAGGC CTTGGTGACGGCGGAGATCAAGCCTGCCGCCAAGCACGCCGGGATTGGTGTCGGCATGTTCGGAGGCGCTGGTTACTTCG GTATCGTCGGCGCACTGTTGCTGTGGCTGTGTGGCGCCTTCGCTTTTTCTCTTATGTGGCAGCATATTGGCAACTGGGAC ATCCTGCTGTCTCTAGTTGTCGGTTTTGCGACGATGGCTGTCGTCCTATTCATCCTGGCAGGCATCCTCGCCCTGGCCGG CAAGGGACAAATATCTCAGGTCAAAGCCCCGACCGGCATCGTTGACGAGGCTAAATCAACTCTCACAGCGGTCAAGTCGG CCGTCGCCCGTGGTAAGTACAACGCCACTGCCCGCAGCAGCATCGACGCCAGCGAAATTCCTTCTCCTGCCGCTCCGGTG GCGGCTGACGGGACTTCCGCTCCCCGCCGCGCTAGCGGTGCGACCGAGCGCGACTGA
Upstream 100 bases:
>100_bases CTAAAGCCAGTTCCTGCGACGACAACTCAACCCGAACACAGCAGATCGAACCTATTCCCGTTAGGCTGAGATCATTACAT TCATCACGCGGAGGCATCCC
Downstream 100 bases:
>100_bases GTTAACTATTACGGCCCTCCCACAGCTATGTGGGAGGGCCGTTGCCTATGATGTAGCCATCAAGGCGCGGAACCCGCACC TCAAGGAATGTCGTTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MADKLPVGDTIDNLKTDGQKLVQDSKALVTAEIKPAAKHAGIGVGMFGGAGYFGIVGALLLWLCGAFAFSLMWQHIGNWD ILLSLVVGFATMAVVLFILAGILALAGKGQISQVKAPTGIVDEAKSTLTAVKSAVARGKYNATARSSIDASEIPSPAAPV AADGTSAPRRASGATERD
Sequences:
>Translated_178_residues MADKLPVGDTIDNLKTDGQKLVQDSKALVTAEIKPAAKHAGIGVGMFGGAGYFGIVGALLLWLCGAFAFSLMWQHIGNWD ILLSLVVGFATMAVVLFILAGILALAGKGQISQVKAPTGIVDEAKSTLTAVKSAVARGKYNATARSSIDASEIPSPAAPV AADGTSAPRRASGATERD >Mature_177_residues ADKLPVGDTIDNLKTDGQKLVQDSKALVTAEIKPAAKHAGIGVGMFGGAGYFGIVGALLLWLCGAFAFSLMWQHIGNWDI LLSLVVGFATMAVVLFILAGILALAGKGQISQVKAPTGIVDEAKSTLTAVKSAVARGKYNATARSSIDASEIPSPAAPVA ADGTSAPRRASGATERD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18208; Mature: 18077
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKLPVGDTIDNLKTDGQKLVQDSKALVTAEIKPAAKHAGIGVGMFGGAGYFGIVGALL CCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCCCCCCCCHHHHHHHHH LWLCGAFAFSLMWQHIGNWDILLSLVVGFATMAVVLFILAGILALAGKGQISQVKAPTGI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCH VDEAKSTLTAVKSAVARGKYNATARSSIDASEIPSPAAPVAADGTSAPRRASGATERD HHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADKLPVGDTIDNLKTDGQKLVQDSKALVTAEIKPAAKHAGIGVGMFGGAGYFGIVGALL CCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHCCCCCCCCCCCCHHHHHHHHH LWLCGAFAFSLMWQHIGNWDILLSLVVGFATMAVVLFILAGILALAGKGQISQVKAPTGI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCH VDEAKSTLTAVKSAVARGKYNATARSSIDASEIPSPAAPVAADGTSAPRRASGATERD HHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA