Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

Click here to switch to the map view.

The map label for this gene is 50841689

Identifier: 50841689

GI number: 50841689

Start: 243747

End: 244361

Strand: Reverse

Name: 50841689

Synonym: PPA2368

Alternate gene names: NA

Gene position: 244361-243747 (Counterclockwise)

Preceding gene: 50841690

Following gene: 50841688

Centisome position: 9.54

GC content: 52.36

Gene sequence:

>615_bases
ATGGGCAACTACCACTGGATAACATCACCCGGGCCCCACAACGCCGAAACCTACCTAGAGCAAGTAGGCGGAGAAACACT
CAGCGGTGCCGCCTTCGGAGGCATCACCGCCACGATAGGAGGAAAAACATACGACACACTCCCAGACTCAATACCCACCG
GACACTTCGGACCCCATAACACAGCCCTTGGAGTTAGGAAAGAGCCAACAACCTTCCTCGCACGATACCACAGAAATGGC
CAGTTAAACCTAAGTCAGGCAACATCATTCCGTGGAGCCACATTCAAAAGCAAGATCGCCATAAAACCCATCACAACCTA
CCGTAGCTGGAGTAATCCAGACTACGAGGTCGGCAGCTACGTGTCCCGGACACGACCAGCAGGACCCCTCCAAACTCAAC
TCGACTTGGCACTTGCCCCCCAATGGAGGAATACTGCTGAAAATGTAACAAAACTCGAAATACCTCGATTCGCGCCGTTC
TACGAAGGTGCAGCCGGAGTGCAACCCGCCAAAGCCATCGAAGACTCAGACACCTTAGGCCAATTACCCGGAGGCGGAAA
CCAAATACTCATCACCGACGAACAGGTGAAAAATCAATGGAAAACGAAGAAATAG

Upstream 100 bases:

>100_bases
CTGGAACCCATCGCAGGCCCCATATCCGGCAAAATCGCAGGTCCCGGAACTCAAACTCTCCTCTCCCGCGGGATAGAAGC
CGGCAACCCAAGGCTACGTG

Downstream 100 bases:

>100_bases
AAGCACCGTACAGAATCATTAGCCTTTCGGAAATCGGACCGCTCGTGCTAGGAAAATGGTCCCAAATTTACGTCGGTTCT
AAATGCATCGGAAGGCCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MGNYHWITSPGPHNAETYLEQVGGETLSGAAFGGITATIGGKTYDTLPDSIPTGHFGPHNTALGVRKEPTTFLARYHRNG
QLNLSQATSFRGATFKSKIAIKPITTYRSWSNPDYEVGSYVSRTRPAGPLQTQLDLALAPQWRNTAENVTKLEIPRFAPF
YEGAAGVQPAKAIEDSDTLGQLPGGGNQILITDEQVKNQWKTKK

Sequences:

>Translated_204_residues
MGNYHWITSPGPHNAETYLEQVGGETLSGAAFGGITATIGGKTYDTLPDSIPTGHFGPHNTALGVRKEPTTFLARYHRNG
QLNLSQATSFRGATFKSKIAIKPITTYRSWSNPDYEVGSYVSRTRPAGPLQTQLDLALAPQWRNTAENVTKLEIPRFAPF
YEGAAGVQPAKAIEDSDTLGQLPGGGNQILITDEQVKNQWKTKK
>Mature_203_residues
GNYHWITSPGPHNAETYLEQVGGETLSGAAFGGITATIGGKTYDTLPDSIPTGHFGPHNTALGVRKEPTTFLARYHRNGQ
LNLSQATSFRGATFKSKIAIKPITTYRSWSNPDYEVGSYVSRTRPAGPLQTQLDLALAPQWRNTAENVTKLEIPRFAPFY
EGAAGVQPAKAIEDSDTLGQLPGGGNQILITDEQVKNQWKTKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22188; Mature: 22057

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNYHWITSPGPHNAETYLEQVGGETLSGAAFGGITATIGGKTYDTLPDSIPTGHFGPHN
CCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
TALGVRKEPTTFLARYHRNGQLNLSQATSFRGATFKSKIAIKPITTYRSWSNPDYEVGSY
CCCCCCCCCHHHHHHHHCCCCEEHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHH
VSRTRPAGPLQTQLDLALAPQWRNTAENVTKLEIPRFAPFYEGAAGVQPAKAIEDSDTLG
HHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCC
QLPGGGNQILITDEQVKNQWKTKK
CCCCCCCEEEEEHHHHHHHCCCCC
>Mature Secondary Structure 
GNYHWITSPGPHNAETYLEQVGGETLSGAAFGGITATIGGKTYDTLPDSIPTGHFGPHN
CCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
TALGVRKEPTTFLARYHRNGQLNLSQATSFRGATFKSKIAIKPITTYRSWSNPDYEVGSY
CCCCCCCCCHHHHHHHHCCCCEEHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHH
VSRTRPAGPLQTQLDLALAPQWRNTAENVTKLEIPRFAPFYEGAAGVQPAKAIEDSDTLG
HHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCC
QLPGGGNQILITDEQVKNQWKTKK
CCCCCCCEEEEEHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA