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The map label for this gene is uxuR [C]

Identifier: 50841653

GI number: 50841653

Start: 198746

End: 199567

Strand: Reverse

Name: uxuR [C]

Synonym: PPA0165

Alternate gene names: 50841653

Gene position: 199567-198746 (Counterclockwise)

Preceding gene: 50841661

Following gene: 50841651

Centisome position: 7.79

GC content: 59.85

Gene sequence:

>822_bases
ATGAACTATTGGCGCCTACGAATCAACTCACCGACGAGGATCCCAGCCATGACACAGACCCGCGACGCCGGCTCCAGTCG
ACCAGACCCACACGCTGGACATCAGGCATCAGTGACCCATTCGAGCACCGCCTCGAAATCGGGGGGGTTCTCGGTTGTCA
TGCGCCACATTGACGACGAAATCCTCGCCGGACGGTGGGTCAACGGTTCTCGTCTTCCCCCAGAGCGAGAGCTCGCAGCT
TCTCTAAGCGTCAGTCGGGGAGCGGTTCGAGAAGCCATTCGGGCTTTAGAGGCCCAGGGGATCCTGTCCTCAGGCACCGG
ACGCAGCAATGGAACCCGCGTCGACGCCCGCCCCTCAGACGCCATGGGACGCATACTGCGACTGCAATTAGCCCTCGACG
TTGTTTCGTTCGCTGATCTCACTGAAACCCGTATAGCGCTTGAAAAAGCTGCCTGTGCTGCAGCGGCAAAGGTGCGCGCC
CCTGTGCCCTTAACTCGGGCGACAGACCTCCTCGTTCAAATGCACGACGCTATGCAACCTGACTCCTTCAACGCCCTCGA
CACTGCCTTCCACGTCGCCTTAGCCGAAGCCGGAGACAACCGCCTCATGAGGGACCTGACGGTGGCCATTCGCGAGGCGG
TGCACCTACCTATCTTGGAAGCGGAGCATTCCCTTATTGGGTGGGAACAATGGCGTGACGATCTCGTCTGCGATCATCAA
GAAATGCTTGCCGCGATCGAGAATGGCGACTCCGAGCGAGCAGCCAAGGTCACCGAGGCGCACATCCGCAATACCTACGA
CACCCTGCTCATCGACAGATGA

Upstream 100 bases:

>100_bases
CATCTCGACTCAGGCGTACCTCACATACCGCACCAAGCCACTGTGAGAATCGCCGAGATCACACCACATCGCCCCGGGAA
GCTCATGAGGTGGACATAAG

Downstream 100 bases:

>100_bases
TTAACGCCGGTTCACCCGCGGTCAGTTGTGCTGCTTATCCAGCTCCCCCTGGAGTCGCTCCAGTTTGGCCGTCATCTCAC
CGGTACGCCCGGGACGAATA

Product: regulator protein

Products: NA

Alternate protein names: GntR Domain-Containing Protein; Transcriptional Regulator; Transcriptional Regulator GntR Family; GntR Domain Protein; Regulatory Protein GntR HTH; GntR-Family Transcriptional Regulator; Gntr Family Transcriptional Regulator; GntR Family L-Asparagine Operon Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator NanR; GntR Family Regulatory Protein; Transcription Regulator; Regulator Protein

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNYWRLRINSPTRIPAMTQTRDAGSSRPDPHAGHQASVTHSSTASKSGGFSVVMRHIDDEILAGRWVNGSRLPPERELAA
SLSVSRGAVREAIRALEAQGILSSGTGRSNGTRVDARPSDAMGRILRLQLALDVVSFADLTETRIALEKAACAAAAKVRA
PVPLTRATDLLVQMHDAMQPDSFNALDTAFHVALAEAGDNRLMRDLTVAIREAVHLPILEAEHSLIGWEQWRDDLVCDHQ
EMLAAIENGDSERAAKVTEAHIRNTYDTLLIDR

Sequences:

>Translated_273_residues
MNYWRLRINSPTRIPAMTQTRDAGSSRPDPHAGHQASVTHSSTASKSGGFSVVMRHIDDEILAGRWVNGSRLPPERELAA
SLSVSRGAVREAIRALEAQGILSSGTGRSNGTRVDARPSDAMGRILRLQLALDVVSFADLTETRIALEKAACAAAAKVRA
PVPLTRATDLLVQMHDAMQPDSFNALDTAFHVALAEAGDNRLMRDLTVAIREAVHLPILEAEHSLIGWEQWRDDLVCDHQ
EMLAAIENGDSERAAKVTEAHIRNTYDTLLIDR
>Mature_273_residues
MNYWRLRINSPTRIPAMTQTRDAGSSRPDPHAGHQASVTHSSTASKSGGFSVVMRHIDDEILAGRWVNGSRLPPERELAA
SLSVSRGAVREAIRALEAQGILSSGTGRSNGTRVDARPSDAMGRILRLQLALDVVSFADLTETRIALEKAACAAAAKVRA
PVPLTRATDLLVQMHDAMQPDSFNALDTAFHVALAEAGDNRLMRDLTVAIREAVHLPILEAEHSLIGWEQWRDDLVCDHQ
EMLAAIENGDSERAAKVTEAHIRNTYDTLLIDR

Specific function: Repressor For The Uxurba Operon. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790780, Length=248, Percent_Identity=27.4193548387097, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1790032, Length=203, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29808; Mature: 29808

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYWRLRINSPTRIPAMTQTRDAGSSRPDPHAGHQASVTHSSTASKSGGFSVVMRHIDDE
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHH
ILAGRWVNGSRLPPERELAASLSVSRGAVREAIRALEAQGILSSGTGRSNGTRVDARPSD
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCH
AMGRILRLQLALDVVSFADLTETRIALEKAACAAAAKVRAPVPLTRATDLLVQMHDAMQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
DSFNALDTAFHVALAEAGDNRLMRDLTVAIREAVHLPILEAEHSLIGWEQWRDDLVCDHQ
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHH
EMLAAIENGDSERAAKVTEAHIRNTYDTLLIDR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MNYWRLRINSPTRIPAMTQTRDAGSSRPDPHAGHQASVTHSSTASKSGGFSVVMRHIDDE
CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHH
ILAGRWVNGSRLPPERELAASLSVSRGAVREAIRALEAQGILSSGTGRSNGTRVDARPSD
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCH
AMGRILRLQLALDVVSFADLTETRIALEKAACAAAAKVRAPVPLTRATDLLVQMHDAMQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
DSFNALDTAFHVALAEAGDNRLMRDLTVAIREAVHLPILEAEHSLIGWEQWRDDLVCDHQ
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHH
EMLAAIENGDSERAAKVTEAHIRNTYDTLLIDR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA