Definition | Mesoplasma florum L1, complete genome. |
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Accession | NC_006055 |
Length | 793,224 |
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The map label for this gene is treB [H]
Identifier: 50365317
GI number: 50365317
Start: 586503
End: 588062
Strand: Reverse
Name: treB [H]
Synonym: Mfl500
Alternate gene names: 50365317
Gene position: 588062-586503 (Counterclockwise)
Preceding gene: 50365318
Following gene: 50365316
Centisome position: 74.14
GC content: 31.99
Gene sequence:
>1560_bases ATGGGTAAAAAAGAAAAATTACCACAAGTAAAGATTGATTTAAAAGCTTGATCAAAAGAACTTGTTGAATATCTTGGTGG TTCTGAAAATATTATTTCAGCAACTCACTGTTTGACAAGACTAAGACTTGTTATTAAAGATGAAAATCTAATTAATAAAG CAAAAGTTGAAACAATGCCAAGTGTTAAAGGTACTTTTAAATCTTCTGGTCAATATCAAATTATCATTGGAACAGAAGTT GAAAAATACTTTAAAGAGTTTGTAGCTGTTTCAGGGGTTGAAGCTGTTTCTAAGGAAAAAGCTAAAGCCATCGCAAACCA AAATAATGGTGGGTGATTCTTAAAATCACTTAACTTTTTAGGAGAAGTATTTATTCCAATTATTCCTGTTTTAGTAGCAG GTGGGATAATCCTAGGATTTAGAAATATTTTAGAAGCAGATTTTAATGGCTTTATAATTGTTAAATCTGGTCAATTCTGA CAAGGACTTGATGACTTCTTATGAATTCCAGCTCAAGTTTGTTTCTGATGACTTCCAGTTCATTTATGCTGAAGTATTTT TAGAAAAATGGAAGCTGACCAAGTTATGGGAATTGTTGTTGGACTATGTTTATTAGTTCCACCTTTAATGAACGTTTATG AAGTTTCTGGTGAAGCTTCACAAGATGGTGGATTTAAATGAATCTGACAAATTATGGCAGGTATGGATGATGGAGCCTTT GACTGAGGTTTCATGAAATATCCTTGAAAAATTCAATATACAGCGCAAGTTATTCCTGCGTTTGCTATTGGTATTGTTGG TGCTTATATCAATAAATGAATTAAAAGAACATCACCAGCAGTTGTAAGTCAAATTGTTGTTCCGTTAGTAACAATTTTAC CAACATTTACATTAGCTATGTTTGTAATTGGTCCTGCAGGATTTATAGTTGCATCAGTTATCAGTTTTGCTATTTCATGA GCATTTACAAATAACATTGCAAAATACTTCTTCGGATTTATAATTGGTATGGCGTATGCACCAATTGTATTAACAGGAGT TCACCACTTATTTAATGCAGTGTTTGTACAAGACACAATACAAAATGGAGGAAACTTCTTATTTATTGGAACATGTGCTC AAGCTATTGCTCAAGGAAGTGCTGTTCTTGGTTGAATATTAGTTAACAAAAAAGATCCAAGAGCAAAAGATGTAGGTATT CCATCAGTTGTTTCAGCTTATCTAGGAGTTACTGAACCAGCAATGTATGGTGTTAACTTAAAACATATGTATCCATTTGT AGCAGCTTCAATTGCAACAGGTTTAGGATTAGAATTAGCAGTTATTTCAGGTGTTAGTGCAACTAACTCAGGAAATGGTG CGTGATTAGGAATTTTAAATGTTCAAGTTGAATCAAAAATTGAAGGTGTTAATACTTGAATTGGAACTGGTTATACATGA TTTATGATATCAATGATATTAACAGCAGCAGTTTCAATAGGATTAACAATGGTATTCTCAAAAGTTAAATATTTCGAAAA ATTCAATATCGAAGTAAAAGCAGCAGAATTACTAAAATAA
Upstream 100 bases:
>100_bases AAGAAAAGAAAATGGAAAATTTCTTCAAAATTATTTAATAGTTTATTTTTTTATATATAATAATAGTGTTGGAAATGTTT CCAATAGAAAGGCAAAGATT
Downstream 100 bases:
>100_bases TATTAAAATAATATTAAAATAAAACTAAATAGAAAAAGGGAAAAAATGAGAAATGAAGTAATTTATCAGATATTCCCTTT AACTTTTTCTGATGGTAAGA
Product: trehalose PTS system IIABC component
Products: NA
Alternate protein names: EIIBC-Tre; EII-Tre; Trehalose-specific phosphotransferase enzyme IIB component; PTS system trehalose-specific EIIB component; Trehalose permease IIC component; PTS system trehalose-specific EIIC component [H]
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MGKKEKLPQVKIDLKAWSKELVEYLGGSENIISATHCLTRLRLVIKDENLINKAKVETMPSVKGTFKSSGQYQIIIGTEV EKYFKEFVAVSGVEAVSKEKAKAIANQNNGGWFLKSLNFLGEVFIPIIPVLVAGGIILGFRNILEADFNGFIIVKSGQFW QGLDDFLWIPAQVCFWWLPVHLCWSIFRKMEADQVMGIVVGLCLLVPPLMNVYEVSGEASQDGGFKWIWQIMAGMDDGAF DWGFMKYPWKIQYTAQVIPAFAIGIVGAYINKWIKRTSPAVVSQIVVPLVTILPTFTLAMFVIGPAGFIVASVISFAISW AFTNNIAKYFFGFIIGMAYAPIVLTGVHHLFNAVFVQDTIQNGGNFLFIGTCAQAIAQGSAVLGWILVNKKDPRAKDVGI PSVVSAYLGVTEPAMYGVNLKHMYPFVAASIATGLGLELAVISGVSATNSGNGAWLGILNVQVESKIEGVNTWIGTGYTW FMISMILTAAVSIGLTMVFSKVKYFEKFNIEVKAAELLK
Sequences:
>Translated_519_residues MGKKEKLPQVKIDLKA*SKELVEYLGGSENIISATHCLTRLRLVIKDENLINKAKVETMPSVKGTFKSSGQYQIIIGTEV EKYFKEFVAVSGVEAVSKEKAKAIANQNNGG*FLKSLNFLGEVFIPIIPVLVAGGIILGFRNILEADFNGFIIVKSGQF* QGLDDFL*IPAQVCF**LPVHLC*SIFRKMEADQVMGIVVGLCLLVPPLMNVYEVSGEASQDGGFK*I*QIMAGMDDGAF D*GFMKYP*KIQYTAQVIPAFAIGIVGAYINK*IKRTSPAVVSQIVVPLVTILPTFTLAMFVIGPAGFIVASVISFAIS* AFTNNIAKYFFGFIIGMAYAPIVLTGVHHLFNAVFVQDTIQNGGNFLFIGTCAQAIAQGSAVLG*ILVNKKDPRAKDVGI PSVVSAYLGVTEPAMYGVNLKHMYPFVAASIATGLGLELAVISGVSATNSGNGA*LGILNVQVESKIEGVNT*IGTGYT* FMISMILTAAVSIGLTMVFSKVKYFEKFNIEVKAAELLK >Mature_518_residues GKKEKLPQVKIDLKA*SKELVEYLGGSENIISATHCLTRLRLVIKDENLINKAKVETMPSVKGTFKSSGQYQIIIGTEVE KYFKEFVAVSGVEAVSKEKAKAIANQNNGG*FLKSLNFLGEVFIPIIPVLVAGGIILGFRNILEADFNGFIIVKSGQF*Q GLDDFL*IPAQVCF**LPVHLC*SIFRKMEADQVMGIVVGLCLLVPPLMNVYEVSGEASQDGGFK*I*QIMAGMDDGAFD *GFMKYP*KIQYTAQVIPAFAIGIVGAYINK*IKRTSPAVVSQIVVPLVTILPTFTLAMFVIGPAGFIVASVISFAIS*A FTNNIAKYFFGFIIGMAYAPIVLTGVHHLFNAVFVQDTIQNGGNFLFIGTCAQAIAQGSAVLG*ILVNKKDPRAKDVGIP SVVSAYLGVTEPAMYGVNLKHMYPFVAASIATGLGLELAVISGVSATNSGNGA*LGILNVQVESKIEGVNT*IGTGYT*F MISMILTAAVSIGLTMVFSKVKYFEKFNIEVKAAELLK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI2367362, Length=461, Percent_Identity=34.4902386117137, Blast_Score=253, Evalue=3e-68, Organism=Escherichia coli, GI48994906, Length=498, Percent_Identity=26.1044176706827, Blast_Score=132, Evalue=5e-32, Organism=Escherichia coli, GI1790159, Length=415, Percent_Identity=24.8192771084337, Blast_Score=118, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011296 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 53428; Mature: 53297
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1 ; PS00134 TRYPSIN_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKEKLPQVKIDLKASKELVEYLGGSENIISATHCLTRLRLVIKDENLINKAKVETMPS CCCCCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC VKGTFKSSGQYQIIIGTEVEKYFKEFVAVSGVEAVSKEKAKAIANQNNGGFLKSLNFLGE CCCCCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VFIPIIPVLVAGGIILGFRNILEADFNGFIIVKSGQFQGLDDFLIPAQVCFLPVHLCSIF HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH RKMEADQVMGIVVGLCLLVPPLMNVYEVSGEASQDGGFKIQIMAGMDDGAFDGFMKYPKI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCH QYTAQVIPAFAIGIVGAYINKIKRTSPAVVSQIVVPLVTILPTFTLAMFVIGPAGFIVAS HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH VISFAISAFTNNIAKYFFGFIIGMAYAPIVLTGVHHLFNAVFVQDTIQNGGNFLFIGTCA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH QAIAQGSAVLGILVNKKDPRAKDVGIPSVVSAYLGVTEPAMYGVNLKHMYPFVAASIATG HHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHC LGLELAVISGVSATNSGNGALGILNVQVESKIEGVNTIGTGYTFMISMILTAAVSIGLTM CCEEEEEEECCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH VFSKVKYFEKFNIEVKAAELLK HHHHHHHHHHCCCEEEHHHHCC >Mature Secondary Structure GKKEKLPQVKIDLKASKELVEYLGGSENIISATHCLTRLRLVIKDENLINKAKVETMPS CCCCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC VKGTFKSSGQYQIIIGTEVEKYFKEFVAVSGVEAVSKEKAKAIANQNNGGFLKSLNFLGE CCCCCCCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VFIPIIPVLVAGGIILGFRNILEADFNGFIIVKSGQFQGLDDFLIPAQVCFLPVHLCSIF HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH RKMEADQVMGIVVGLCLLVPPLMNVYEVSGEASQDGGFKIQIMAGMDDGAFDGFMKYPKI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCH QYTAQVIPAFAIGIVGAYINKIKRTSPAVVSQIVVPLVTILPTFTLAMFVIGPAGFIVAS HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH VISFAISAFTNNIAKYFFGFIIGMAYAPIVLTGVHHLFNAVFVQDTIQNGGNFLFIGTCA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH QAIAQGSAVLGILVNKKDPRAKDVGIPSVVSAYLGVTEPAMYGVNLKHMYPFVAASIATG HHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHC LGLELAVISGVSATNSGNGALGILNVQVESKIEGVNTIGTGYTFMISMILTAAVSIGLTM CCEEEEEEECCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH VFSKVKYFEKFNIEVKAAELLK HHHHHHHHHHCCCEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7608078; 7610040; 9278503 [H]