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The map label for this gene is ihfB [C]

Identifier: 50365246

GI number: 50365246

Start: 502913

End: 503728

Strand: Reverse

Name: ihfB [C]

Synonym: Mfl428

Alternate gene names: 50365246

Gene position: 503728-502913 (Counterclockwise)

Preceding gene: 50365247

Following gene: 50365245

Centisome position: 63.5

GC content: 20.71

Gene sequence:

>816_bases
ATGAAATTAATTAATAAAAATAATCTTAAAATATCAATTATTTTTCTATTGATTATTCTTTTTACTACTTTATTGATCAT
TTTTAAATTATTAAATAATGTTTATAATGGAAATCAAGAATGAAGTGAGGTAATTTCATCTGGATTTAACTCACAAGTTG
TATCTAAATGATTTGAAAATACTAATCATTTTTTACAAGGTCCTATTGGTTTTTATTCTATGTTTCAATCTAAACTATAT
GTTGATTCAACTTTCTTAACTCCTATATTTTTAGATGCATTTATAAATTGAATGTATGTGATTATCCTAATAATTTTGTT
AACTATACTTGTTTTACAGTTTTGATTTAAAAAACAAACAATAAAAACAAATGAAACTATAGTTCAAAAAAATAAAAGTT
CATTATTAATTATTAAAGAAAAAGTTATTAGAGAAGATAAATTAATTAAGAAAACTAGTTATGATAAGGTATCAAAAAAA
TATTTAGTTGAAAGACTTACAGAAATGTATCCTGATTATAAAAAGAAAACTATTGATGAAATTGTTAAAAATTTATTTCA
AAATGTTGAAAATCATTTAATAAGTGGAGAAGAAGTTATAATTGAAAACTTTGGAAAATTAATTAAAGTTGAAAAGCCGG
TAAAACAAGCAATTAATCCATCAAATGGAGAAATTGTAGAAGTTCCCGCAACAACAATAATTAAATTTAAACCTTCACGT
AATTTAAAATTAATTATGTCAGATACAAAATGAACTGGAATTAAATATAATAAAAAAACAATTGAAACGATAACAATTGA
AGAGGAACAAAAATAA

Upstream 100 bases:

>100_bases
AATAAGTATATTACTATGAATTCTAGCAGCACTTAATATAGTTGCAATTGCTATAGCAGCTATATTTATTAAAAAGAAAA
AGAAAGATGAGAATTAAGAT

Downstream 100 bases:

>100_bases
GCTTAGGCTTATTTTTTTCTATTTTAACCAAAAAATAAATAATGACAATATAAAAATAACATTATTTTAAAAATTAAAAT
AGTAATATAAAAGTAGGTAA

Product: histone-like DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKLINKNNLKISIIFLLIILFTTLLIIFKLLNNVYNGNQEWSEVISSGFNSQVVSKWFENTNHFLQGPIGFYSMFQSKLY
VDSTFLTPIFLDAFINWMYVIILIILLTILVLQFWFKKQTIKTNETIVQKNKSSLLIIKEKVIREDKLIKKTSYDKVSKK
YLVERLTEMYPDYKKKTIDEIVKNLFQNVENHLISGEEVIIENFGKLIKVEKPVKQAINPSNGEIVEVPATTIIKFKPSR
NLKLIMSDTKWTGIKYNKKTIETITIEEEQK

Sequences:

>Translated_271_residues
MKLINKNNLKISIIFLLIILFTTLLIIFKLLNNVYNGNQE*SEVISSGFNSQVVSK*FENTNHFLQGPIGFYSMFQSKLY
VDSTFLTPIFLDAFIN*MYVIILIILLTILVLQF*FKKQTIKTNETIVQKNKSSLLIIKEKVIREDKLIKKTSYDKVSKK
YLVERLTEMYPDYKKKTIDEIVKNLFQNVENHLISGEEVIIENFGKLIKVEKPVKQAINPSNGEIVEVPATTIIKFKPSR
NLKLIMSDTK*TGIKYNKKTIETITIEEEQK
>Mature_271_residues
MKLINKNNLKISIIFLLIILFTTLLIIFKLLNNVYNGNQE*SEVISSGFNSQVVSK*FENTNHFLQGPIGFYSMFQSKLY
VDSTFLTPIFLDAFIN*MYVIILIILLTILVLQF*FKKQTIKTNETIVQKNKSSLLIIKEKVIREDKLIKKTSYDKVSKK
YLVERLTEMYPDYKKKTIDEIVKNLFQNVENHLISGEEVIIENFGKLIKVEKPVKQAINPSNGEIVEVPATTIIKFKPSR
NLKLIMSDTK*TGIKYNKKTIETITIEEEQK

Specific function: This Protein Is One Of The Two Subunits Of Integration Host Factor, A Specific DNA-Binding Protein That Functions In Genetic Recombination As Well As In Transcriptional And Translational Control. Ihf Also Plays A Crucial Role In The Lysogenic Life Cycle

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30706; Mature: 30706

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLINKNNLKISIIFLLIILFTTLLIIFKLLNNVYNGNQESEVISSGFNSQVVSKFENTN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCC
HFLQGPIGFYSMFQSKLYVDSTFLTPIFLDAFINMYVIILIILLTILVLQFFKKQTIKTN
CHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ETIVQKNKSSLLIIKEKVIREDKLIKKTSYDKVSKKYLVERLTEMYPDYKKKTIDEIVKN
HHHHHCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LFQNVENHLISGEEVIIENFGKLIKVEKPVKQAINPSNGEIVEVPATTIIKFKPSRNLKL
HHHHHHHHHCCCHHHHHHHHHHHEECCHHHHHCCCCCCCCEEEECCEEEEEECCCCCEEE
IMSDTKTGIKYNKKTIETITIEEEQK
EEECCCCCCEECCEEEEEEEECCCCC
>Mature Secondary Structure
MKLINKNNLKISIIFLLIILFTTLLIIFKLLNNVYNGNQESEVISSGFNSQVVSKFENTN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHCCC
HFLQGPIGFYSMFQSKLYVDSTFLTPIFLDAFINMYVIILIILLTILVLQFFKKQTIKTN
CHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ETIVQKNKSSLLIIKEKVIREDKLIKKTSYDKVSKKYLVERLTEMYPDYKKKTIDEIVKN
HHHHHCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LFQNVENHLISGEEVIIENFGKLIKVEKPVKQAINPSNGEIVEVPATTIIKFKPSRNLKL
HHHHHHHHHCCCHHHHHHHHHHHEECCHHHHHCCCCCCCCEEEECCEEEEEECCCCCEEE
IMSDTKTGIKYNKKTIETITIEEEQK
EEECCCCCCEECCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA