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The map label for this gene is 50365148

Identifier: 50365148

GI number: 50365148

Start: 389471

End: 389875

Strand: Reverse

Name: 50365148

Synonym: Mfl332

Alternate gene names: NA

Gene position: 389875-389471 (Counterclockwise)

Preceding gene: 50365149

Following gene: 50365147

Centisome position: 49.15

GC content: 24.44

Gene sequence:

>405_bases
ATGAGTGAACAAAAATTAAGTATGACAAAAAGACGTACATATCTAGTTCAAATGTTTTATAGATATTTATTAATGAATAA
TGATGTTAATTACATCAAACAAGATATATTAGATGAAACACAAGAAAAATTAGATGTTGAGACAACACTAATAGCAAATA
ATATTGCTGAAAAGCTTTCAGATCTGAAAAAAGAAATTATTAAACATTTAAGTGCTAATTGAAAATGAGAAAGAATACCA
ACATACATTCAATCAATTTTAATTATTGGTGCATATGAAATTATTTTTACTCCAACTCCAAAAGCTGTAACAATTAATGA
ATTAGTTAATTTGGTGAAAGAAAACGAAGTTGATTTTGATTACAAGTTTGTAAATGCGTGTTTGGATAAGGTTATTAAAC
TATAA

Upstream 100 bases:

>100_bases
TCCATATAAAGAAGAAATTGAAAACCTAATTAATAAAAATTTTTCCAAAAAAGTTAAATAAAATATGAGATAATTAATAA
ATCAAGGGGCAGGTGATATT

Downstream 100 bases:

>100_bases
TGGAAAACAAAATATTTTCAGTAGCTGAAATAAGTCAAATATTTAAAGAAGCTATTGAAGGTAGTAATTATTTTAAAAAT
ATATATGTCAGAGGGGAAGT

Product: transcription termination factor

Products: NA

Alternate protein names: Transcription Termination Factor NusB; Transcription Antitermination Factor NusB

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSEQKLSMTKRRTYLVQMFYRYLLMNNDVNYIKQDILDETQEKLDVETTLIANNIAEKLSDLKKEIIKHLSANWKWERIP
TYIQSILIIGAYEIIFTPTPKAVTINELVNLVKENEVDFDYKFVNACLDKVIKL

Sequences:

>Translated_134_residues
MSEQKLSMTKRRTYLVQMFYRYLLMNNDVNYIKQDILDETQEKLDVETTLIANNIAEKLSDLKKEIIKHLSAN*K*ERIP
TYIQSILIIGAYEIIFTPTPKAVTINELVNLVKENEVDFDYKFVNACLDKVIKL
>Mature_133_residues
SEQKLSMTKRRTYLVQMFYRYLLMNNDVNYIKQDILDETQEKLDVETTLIANNIAEKLSDLKKEIIKHLSAN*K*ERIPT
YIQSILIIGAYEIIFTPTPKAVTINELVNLVKENEVDFDYKFVNACLDKVIKL

Specific function: Unknown

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15427; Mature: 15296

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQKLSMTKRRTYLVQMFYRYLLMNNDVNYIKQDILDETQEKLDVETTLIANNIAEKLS
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLKKEIIKHLSANKERIPTYIQSILIIGAYEIIFTPTPKAVTINELVNLVKENEVDFDYK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEHHHHHHHHHHCCCCHHHH
FVNACLDKVIKL
HHHHHHHHHHCC
>Mature Secondary Structure 
SEQKLSMTKRRTYLVQMFYRYLLMNNDVNYIKQDILDETQEKLDVETTLIANNIAEKLS
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLKKEIIKHLSANKERIPTYIQSILIIGAYEIIFTPTPKAVTINELVNLVKENEVDFDYK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEEHHHHHHHHHHCCCCHHHH
FVNACLDKVIKL
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA