Definition | Mesoplasma florum L1, complete genome. |
---|---|
Accession | NC_006055 |
Length | 793,224 |
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The map label for this gene is 50365121
Identifier: 50365121
GI number: 50365121
Start: 350245
End: 352752
Strand: Direct
Name: 50365121
Synonym: Mfl305
Alternate gene names: NA
Gene position: 350245-352752 (Clockwise)
Preceding gene: 50365120
Following gene: 50365122
Centisome position: 44.15
GC content: 22.01
Gene sequence:
>2508_bases ATGAAAAAAAGAATATTTAATAAATTTCAACCATATTTAAATGAATTTGAAAAAGAAAAAATAGCATTAGTAGAGGAAAA AATAACAGGTGATAATGAAAGAATAGCTAATGACGTTTCAGTGGATTTAATAATTATATTAGAATCAAAAATGATGAGCA TATTAGAAAAATATGATATTTATTGTCCATTAGATGAAAGAGGAGCTAAAAATCTATTTGATAAAATAAGAAGTTTATAT ATACGAGAAAAAAAACTTGAGTCAGAAAAGTTTACAAATGTTAACATACCTAAAATTATATATTCAACTTTTGAATATAT AAGAAATTGAAGAAATAATGATGGTGGTCATGCGTCTGAATTTGTCATAAACAGAAGTTTTATGGATACAATACATTTAC TGAAGTGTTTTGATATAGTTTTATCATTTTTAATTAATTTTTTTGATGATTTAGACTTTGAAATAAATGAGTTTGATGAA AAAGGTTTACTTTCTTCATGAAATAAAAGGGGTCATTTTATAGATGAAATTTTAGAGGAAGATAAAAAATTAGATACAAC ATCTATAAAACTAGGGAAAATAAATTTAAGTTCTTTTGTTTTAAATTCAGAAATAAGTTTTTTTATACCATCGTATCAAA GAAAATATAGATGAGAATCAGAAACTTGCTTAGAGCTTATAGAAAATATCATTTCTAAAATTGATCAAATTGATGACGAA TATTTTGGAACTATAGCAGTTACTATAGAGGAATCTAAACATAATGAAAAAATAAGAACAATAAGATTAATAGATGGGCA ACAAAGAGTAACTACCTCTTTAATTATATTTAGAGCAATATATGATGTTTGAAATGATAAAAAAAATAATTCTTATGAAG AAACAGTAATGGATACACCTTTAGAATTAGAAAAAACTTTCAAAGAAATTGGGTGTGCAGAAAAATATAAAAATGTTACA GGAGTTAAAGAAGAAAATGAAGCTCTTAATTTTATATTAAATTCTAATGTTAGTTACGTCGAAAGATTAAAAACAATAAA TTCTTTTGAGCTACATAATAAATCATTAGCAGCTAAAAATTACAATGCTATACACGATAGAATTAAAGAATTGAATCAAG ATGAATTACTTTCTTTTTATAATAGATATGCATATAAGTTTCTAATTTCATGTGTTGATTTTAATAAAACTCCAGCAGAA GAAATGGAAATTTTTGAAACACTTAATTCTAAAGGGACTGAATTAGATTCGTTTGATATGATAAAAAACTTTTTATTTAA TTTAGTAGATAAAGAAATTTATATAAATAATGAATTAGAAATAACTAGAATATTTAATGATTATATTTCTTTTAATGATA TGAAGTTAGATGAAGCTAAAACGAGAAAGGTACAAGAAAACTTTTTATTTGGTTTTTGTGAATATAAGATGTTAAATTTT AAAGCATCAGATAATACTTTGAGCAAAAATAAAAAATCAATTTTAAAGCATTTTAAAAAAATTTATGAAGGTAAACAAAA CTTATCTTTAGAAGAGTATAAAAAAATAGTATCAGAGATAGGTAAATATGTTTTTATAACTAAATCATTTATATCAAAAA GTTATGAAAATGACACAAATGATATTTTATACCCAATAAGATATAATGTTTCAAATATATCGCATAAAGAAGTTTCGATT TTTATTTTGTATTATTTTATTGACTTATATGCTAAAAATAATTGAGATTCTTATAATAAAACATTAAATTATTCAGAAAA AGTGAATTTAATGAAAGATACTTTATTTGAATTTGAAAGATGATTGATAGCTCTACTTCAAGTTTATGGAACTGGACAAT CTTTAACAAAACCAATATTGAGATTATTTAGATTTTTAAATACATTCGACATTGATAATCATTCTGTACAAAGTGAAATA CCAAATATGATTAGAAAATGATTAAATTTAGAAGCAACTGATGCGTTTGCATTTTTAAATAATGACCAAAGAAGATTATT ATTAGAAAACAATGAATTGAAAATGCCTAATAAAGATTTATTTTTTGAAAACTTAATAAACAAAAAAGTTCAAGATAAAA ATGTGGCAATGGTAATTTTAAAAAGATTGGAAAGTTTTTTAATCAATAATTGAGAAATTAAAAGAGATAAAAACTCTCTT GAACATATAATGCCTAGAACTATAAAAAAAACAAAATGAATTGAATACTTAAAGGAAAATGAAAGTTTGACTGAAAAAGA TATTTTAGAAAAACATTCAGTTTATTTAGATAAATTGGGTAATTATATGATATTAGACAAAAGTAAAGAAAATTCAAAGA TTTCTAATAATGATTTTGAAGAAAAAAGGAAGCAATATATACTTTGAAGTAATCCATTAGCTGAATTAATATTTGATTAT AATGAAAAGAAAAATTTAAATAATATCAATAAGTTTGGTTTTGATGAGATTCAAGAAAGAACCGTTGCATTAGCTAAAAT AATTTCTGAAAATATTTATTATAAATAA
Upstream 100 bases:
>100_bases ATATCTGTCAATGTTTTAACTTCTATTTTTAAAGTAATTGCAGATATAGAAAATAAAACATTTAAAGGATAAAAAGATAT AATTTTAAAAAAGGGGTAAT
Downstream 100 bases:
>100_bases TAGGAGTAGAAAAATGTCAAAAAATGTAACTTTAATACTTATAGCTGGTGGAACAGCATCAGGAAAAACAACTGTTGCTG ATAGAATAGCTAATGAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 835; Mature: 835
Protein sequence:
>835_residues MKKRIFNKFQPYLNEFEKEKIALVEEKITGDNERIANDVSVDLIIILESKMMSILEKYDIYCPLDERGAKNLFDKIRSLY IREKKLESEKFTNVNIPKIIYSTFEYIRNWRNNDGGHASEFVINRSFMDTIHLLKCFDIVLSFLINFFDDLDFEINEFDE KGLLSSWNKRGHFIDEILEEDKKLDTTSIKLGKINLSSFVLNSEISFFIPSYQRKYRWESETCLELIENIISKIDQIDDE YFGTIAVTIEESKHNEKIRTIRLIDGQQRVTTSLIIFRAIYDVWNDKKNNSYEETVMDTPLELEKTFKEIGCAEKYKNVT GVKEENEALNFILNSNVSYVERLKTINSFELHNKSLAAKNYNAIHDRIKELNQDELLSFYNRYAYKFLISCVDFNKTPAE EMEIFETLNSKGTELDSFDMIKNFLFNLVDKEIYINNELEITRIFNDYISFNDMKLDEAKTRKVQENFLFGFCEYKMLNF KASDNTLSKNKKSILKHFKKIYEGKQNLSLEEYKKIVSEIGKYVFITKSFISKSYENDTNDILYPIRYNVSNISHKEVSI FILYYFIDLYAKNNWDSYNKTLNYSEKVNLMKDTLFEFERWLIALLQVYGTGQSLTKPILRLFRFLNTFDIDNHSVQSEI PNMIRKWLNLEATDAFAFLNNDQRRLLLENNELKMPNKDLFFENLINKKVQDKNVAMVILKRLESFLINNWEIKRDKNSL EHIMPRTIKKTKWIEYLKENESLTEKDILEKHSVYLDKLGNYMILDKSKENSKISNNDFEEKRKQYILWSNPLAELIFDY NEKKNLNNINKFGFDEIQERTVALAKIISENIYYK
Sequences:
>Translated_835_residues MKKRIFNKFQPYLNEFEKEKIALVEEKITGDNERIANDVSVDLIIILESKMMSILEKYDIYCPLDERGAKNLFDKIRSLY IREKKLESEKFTNVNIPKIIYSTFEYIRN*RNNDGGHASEFVINRSFMDTIHLLKCFDIVLSFLINFFDDLDFEINEFDE KGLLSS*NKRGHFIDEILEEDKKLDTTSIKLGKINLSSFVLNSEISFFIPSYQRKYR*ESETCLELIENIISKIDQIDDE YFGTIAVTIEESKHNEKIRTIRLIDGQQRVTTSLIIFRAIYDV*NDKKNNSYEETVMDTPLELEKTFKEIGCAEKYKNVT GVKEENEALNFILNSNVSYVERLKTINSFELHNKSLAAKNYNAIHDRIKELNQDELLSFYNRYAYKFLISCVDFNKTPAE EMEIFETLNSKGTELDSFDMIKNFLFNLVDKEIYINNELEITRIFNDYISFNDMKLDEAKTRKVQENFLFGFCEYKMLNF KASDNTLSKNKKSILKHFKKIYEGKQNLSLEEYKKIVSEIGKYVFITKSFISKSYENDTNDILYPIRYNVSNISHKEVSI FILYYFIDLYAKNN*DSYNKTLNYSEKVNLMKDTLFEFER*LIALLQVYGTGQSLTKPILRLFRFLNTFDIDNHSVQSEI PNMIRK*LNLEATDAFAFLNNDQRRLLLENNELKMPNKDLFFENLINKKVQDKNVAMVILKRLESFLINN*EIKRDKNSL EHIMPRTIKKTK*IEYLKENESLTEKDILEKHSVYLDKLGNYMILDKSKENSKISNNDFEEKRKQYIL*SNPLAELIFDY NEKKNLNNINKFGFDEIQERTVALAKIISENIYYK >Mature_835_residues MKKRIFNKFQPYLNEFEKEKIALVEEKITGDNERIANDVSVDLIIILESKMMSILEKYDIYCPLDERGAKNLFDKIRSLY IREKKLESEKFTNVNIPKIIYSTFEYIRN*RNNDGGHASEFVINRSFMDTIHLLKCFDIVLSFLINFFDDLDFEINEFDE KGLLSS*NKRGHFIDEILEEDKKLDTTSIKLGKINLSSFVLNSEISFFIPSYQRKYR*ESETCLELIENIISKIDQIDDE YFGTIAVTIEESKHNEKIRTIRLIDGQQRVTTSLIIFRAIYDV*NDKKNNSYEETVMDTPLELEKTFKEIGCAEKYKNVT GVKEENEALNFILNSNVSYVERLKTINSFELHNKSLAAKNYNAIHDRIKELNQDELLSFYNRYAYKFLISCVDFNKTPAE EMEIFETLNSKGTELDSFDMIKNFLFNLVDKEIYINNELEITRIFNDYISFNDMKLDEAKTRKVQENFLFGFCEYKMLNF KASDNTLSKNKKSILKHFKKIYEGKQNLSLEEYKKIVSEIGKYVFITKSFISKSYENDTNDILYPIRYNVSNISHKEVSI FILYYFIDLYAKNN*DSYNKTLNYSEKVNLMKDTLFEFER*LIALLQVYGTGQSLTKPILRLFRFLNTFDIDNHSVQSEI PNMIRK*LNLEATDAFAFLNNDQRRLLLENNELKMPNKDLFFENLINKKVQDKNVAMVILKRLESFLINN*EIKRDKNSL EHIMPRTIKKTK*IEYLKENESLTEKDILEKHSVYLDKLGNYMILDKSKENSKISNNDFEEKRKQYIL*SNPLAELIFDY NEKKNLNNINKFGFDEIQERTVALAKIISENIYYK
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97372; Mature: 97372
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRIFNKFQPYLNEFEKEKIALVEEKITGDNERIANDVSVDLIIILESKMMSILEKYDI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEEHHHHHHHHHHCCC YCPLDERGAKNLFDKIRSLYIREKKLESEKFTNVNIPKIIYSTFEYIRNRNNDGGHASEF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH VINRSFMDTIHLLKCFDIVLSFLINFFDDLDFEINEFDEKGLLSSNKRGHFIDEILEEDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC KLDTTSIKLGKINLSSFVLNSEISFFIPSYQRKYRESETCLELIENIISKIDQIDDEYFG CCCCCEEEEEEEEHHHHHCCCCCCEECCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCC TIAVTIEESKHNEKIRTIRLIDGQQRVTTSLIIFRAIYDVNDKKNNSYEETVMDTPLELE EEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHH KTFKEIGCAEKYKNVTGVKEENEALNFILNSNVSYVERLKTINSFELHNKSLAAKNYNAI HHHHHHCHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCHHHHCCCHHHHCCHHHH HDRIKELNQDELLSFYNRYAYKFLISCVDFNKTPAEEMEIFETLNSKGTELDSFDMIKNF HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH LFNLVDKEIYINNELEITRIFNDYISFNDMKLDEAKTRKVQENFLFGFCEYKMLNFKASD HHHHHCCEEEECCCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEECCC NTLSKNKKSILKHFKKIYEGKQNLSLEEYKKIVSEIGKYVFITKSFISKSYENDTNDILY CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHCCCCCCCEEE PIRYNVSNISHKEVSIFILYYFIDLYAKNNDSYNKTLNYSEKVNLMKDTLFEFERLIALL EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QVYGTGQSLTKPILRLFRFLNTFDIDNHSVQSEIPNMIRKLNLEATDAFAFLNNDQRRLL HHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHEECCCCCEEE LENNELKMPNKDLFFENLINKKVQDKNVAMVILKRLESFLINNEIKRDKNSLEHIMPRTI EECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KKTKIEYLKENESLTEKDILEKHSVYLDKLGNYMILDKSKENSKISNNDFEEKRKQYILS HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH NPLAELIFDYNEKKNLNNINKFGFDEIQERTVALAKIISENIYYK CHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKRIFNKFQPYLNEFEKEKIALVEEKITGDNERIANDVSVDLIIILESKMMSILEKYDI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEEEHHHHHHHHHHCCC YCPLDERGAKNLFDKIRSLYIREKKLESEKFTNVNIPKIIYSTFEYIRNRNNDGGHASEF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH VINRSFMDTIHLLKCFDIVLSFLINFFDDLDFEINEFDEKGLLSSNKRGHFIDEILEEDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC KLDTTSIKLGKINLSSFVLNSEISFFIPSYQRKYRESETCLELIENIISKIDQIDDEYFG CCCCCEEEEEEEEHHHHHCCCCCCEECCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCC TIAVTIEESKHNEKIRTIRLIDGQQRVTTSLIIFRAIYDVNDKKNNSYEETVMDTPLELE EEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHH KTFKEIGCAEKYKNVTGVKEENEALNFILNSNVSYVERLKTINSFELHNKSLAAKNYNAI HHHHHHCHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCHHHHCCCHHHHCCHHHH HDRIKELNQDELLSFYNRYAYKFLISCVDFNKTPAEEMEIFETLNSKGTELDSFDMIKNF HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH LFNLVDKEIYINNELEITRIFNDYISFNDMKLDEAKTRKVQENFLFGFCEYKMLNFKASD HHHHHCCEEEECCCEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEECCC NTLSKNKKSILKHFKKIYEGKQNLSLEEYKKIVSEIGKYVFITKSFISKSYENDTNDILY CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHCCCCCCCEEE PIRYNVSNISHKEVSIFILYYFIDLYAKNNDSYNKTLNYSEKVNLMKDTLFEFERLIALL EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QVYGTGQSLTKPILRLFRFLNTFDIDNHSVQSEIPNMIRKLNLEATDAFAFLNNDQRRLL HHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHEECCCCCEEE LENNELKMPNKDLFFENLINKKVQDKNVAMVILKRLESFLINNEIKRDKNSLEHIMPRTI EECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KKTKIEYLKENESLTEKDILEKHSVYLDKLGNYMILDKSKENSKISNNDFEEKRKQYILS HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH NPLAELIFDYNEKKNLNNINKFGFDEIQERTVALAKIISENIYYK CHHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA