| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
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The map label for this gene is 50365090
Identifier: 50365090
GI number: 50365090
Start: 314145
End: 315689
Strand: Direct
Name: 50365090
Synonym: Mfl274
Alternate gene names: NA
Gene position: 314145-315689 (Clockwise)
Preceding gene: 50365089
Following gene: 50365091
Centisome position: 39.6
GC content: 24.53
Gene sequence:
>1545_bases ATGGCAAGAAAAAAAAGAATAAAAATTTATTCATCTAATGGTAAAAAAGCTTTACTACTTTCACCCGAAGAAATAACAAT AGTAAAAAATGATCCAAGCTATGAAAAAAACTATGAAATAGAATTCAATAAAGGTAAACAGGCTTTCGAGGTTAGAAACT ATTATGCTATTGGATTTTGAAAAGATCTTTTATTTGTTTTAATAGGTGCATTCCTTTCAACTATTGCAATAGATTATTTT ATATCTATAACTGGTAATGCTGGATTATTCCCTGGTGGTTTAGGTGCCATAGCTCGTTTCCTATCTATAATAGGAGCTAA TAATATAACAATTTCAGCAAGTACACTTTATTTTATAGTTTACTTCATCATGAATATTCCCTTAGTAATTTTTGGATTTA TAAAAATAGGATGAAAGTTTTCAACTCTTACATTAATTTATTCAATTATTTCAATTTTCTTTGATTTAATATTACAAAAT ATTCCCTACATAAACCCTAATGAATTTAGTTTACTTATTGATTACAATTTAATTAGTTCTTTACCGGGTGCTTGAGGAGC AATTATTTGAATTTTTGCTTTTGCTATCTTTGGTGGAATGATTAACGGATTTAGTTATTCAATTACATATAAAGGAAATG CATCAACTGGTGGAAGTGACTGAGTTACTTATTATTATTCTAAAAAATTAAACAAAGATATTGGTTCATTAAATATAAAA ATAAATATTTTCATATTATTTATTGTTATTTGTTTGAACACAATTATTTTAAAAACACAACACATTGATCAGACAATCAA ACTAAGTGCTATTTACAATGAATATAATAGTTGAAATGAGTTGATAAATTCAGATTTAGGAAAAGCTCTAGATCCTATAT TATCTGCTGAGGATAAAGTTTCAATAGACTTATTTAATAGTTGAAAAAATTTAAAATCTGGAAATTGAAACAATGAAGAT TGATTTAATATTTCAAAATATATCTCATCATCATCTGAGTATGATTCATATTACACTTCAACATTAGTTTGAAAAATGAA ATTCAAATGAATTATTGGACCAAGTTTATTTGCATCTTTAACATTAATAATTACACAGGGATTAACTGTTAATAGACTTT ATCCTAAAAATAAAATTTTGAACTTATTTATATCAACAAACAAAATTAATGAAGTTCAACAATATTTATTTAGTGTTGGT TACACAAACAATATTTTCATTTGAAGAACTGTTGCTTCAAAGAAAAATGCCTGAAATGATCAAGAACAAGATTTAATTAT GATTTCTATGCCGTTACTATACTTTAATAAGATTGAAGACTATTTAATCAAAATAGATGAAGACATGATTATTAATATAA TTGGAAGTAAAGCTGTTAAAGGTAAAAACTTTAGTTATACATTTGATAATGAATTACGTGAAAAAGCATTAACTGAAGAA TTCATGAATAATGGTAAATTAATGAAAAAAATTGAAAGCAATACAATTATTAAGACACACAAAAAAATGAAAAAAAATGG TGTTAGTATACAAAATGAGGTATAA
Upstream 100 bases:
>100_bases TATTTGATTAATATTTAAAAAAGTAGAATATTCTGCTTTTTATTTTTATATTTTTTAGTATTATTAAAAATAGAAATAAT CAAATCAAAGGAAAGTAGAT
Downstream 100 bases:
>100_bases TCTTTTATAGATTATACTTTTTATTTTAAGTATTAACTTTTCAGACAAGGAGGAGTAAATAAATGAATAATAAAAAAGCT TCATTTAAGAAAATAGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MARKKRIKIYSSNGKKALLLSPEEITIVKNDPSYEKNYEIEFNKGKQAFEVRNYYAIGFWKDLLFVLIGAFLSTIAIDYF ISITGNAGLFPGGLGAIARFLSIIGANNITISASTLYFIVYFIMNIPLVIFGFIKIGWKFSTLTLIYSIISIFFDLILQN IPYINPNEFSLLIDYNLISSLPGAWGAIIWIFAFAIFGGMINGFSYSITYKGNASTGGSDWVTYYYSKKLNKDIGSLNIK INIFILFIVICLNTIILKTQHIDQTIKLSAIYNEYNSWNELINSDLGKALDPILSAEDKVSIDLFNSWKNLKSGNWNNED WFNISKYISSSSEYDSYYTSTLVWKMKFKWIIGPSLFASLTLIITQGLTVNRLYPKNKILNLFISTNKINEVQQYLFSVG YTNNIFIWRTVASKKNAWNDQEQDLIMISMPLLYFNKIEDYLIKIDEDMIINIIGSKAVKGKNFSYTFDNELREKALTEE FMNNGKLMKKIESNTIIKTHKKMKKNGVSIQNEV
Sequences:
>Translated_514_residues MARKKRIKIYSSNGKKALLLSPEEITIVKNDPSYEKNYEIEFNKGKQAFEVRNYYAIGF*KDLLFVLIGAFLSTIAIDYF ISITGNAGLFPGGLGAIARFLSIIGANNITISASTLYFIVYFIMNIPLVIFGFIKIG*KFSTLTLIYSIISIFFDLILQN IPYINPNEFSLLIDYNLISSLPGA*GAII*IFAFAIFGGMINGFSYSITYKGNASTGGSD*VTYYYSKKLNKDIGSLNIK INIFILFIVICLNTIILKTQHIDQTIKLSAIYNEYNS*NELINSDLGKALDPILSAEDKVSIDLFNS*KNLKSGN*NNED *FNISKYISSSSEYDSYYTSTLV*KMKFK*IIGPSLFASLTLIITQGLTVNRLYPKNKILNLFISTNKINEVQQYLFSVG YTNNIFI*RTVASKKNA*NDQEQDLIMISMPLLYFNKIEDYLIKIDEDMIINIIGSKAVKGKNFSYTFDNELREKALTEE FMNNGKLMKKIESNTIIKTHKKMKKNGVSIQNEV >Mature_513_residues ARKKRIKIYSSNGKKALLLSPEEITIVKNDPSYEKNYEIEFNKGKQAFEVRNYYAIGF*KDLLFVLIGAFLSTIAIDYFI SITGNAGLFPGGLGAIARFLSIIGANNITISASTLYFIVYFIMNIPLVIFGFIKIG*KFSTLTLIYSIISIFFDLILQNI PYINPNEFSLLIDYNLISSLPGA*GAII*IFAFAIFGGMINGFSYSITYKGNASTGGSD*VTYYYSKKLNKDIGSLNIKI NIFILFIVICLNTIILKTQHIDQTIKLSAIYNEYNS*NELINSDLGKALDPILSAEDKVSIDLFNS*KNLKSGN*NNED* FNISKYISSSSEYDSYYTSTLV*KMKFK*IIGPSLFASLTLIITQGLTVNRLYPKNKILNLFISTNKINEVQQYLFSVGY TNNIFI*RTVASKKNA*NDQEQDLIMISMPLLYFNKIEDYLIKIDEDMIINIIGSKAVKGKNFSYTFDNELREKALTEEF MNNGKLMKKIESNTIIKTHKKMKKNGVSIQNEV
Specific function: Unknown
COG id: COG1284
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.genitalium MG432 and MG443 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003740 [H]
Pfam domain/function: PF02588 DUF161 [H]
EC number: NA
Molecular weight: Translated: 56225; Mature: 56094
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKKRIKIYSSNGKKALLLSPEEITIVKNDPSYEKNYEIEFNKGKQAFEVRNYYAIGFK CCCCEEEEEEECCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCCCEEEECCEEEECHH DLLFVLIGAFLSTIAIDYFISITGNAGLFPGGLGAIARFLSIIGANNITISASTLYFIVY HHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHH FIMNIPLVIFGFIKIGKFSTLTLIYSIISIFFDLILQNIPYINPNEFSLLIDYNLISSLP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCCC GAGAIIIFAFAIFGGMINGFSYSITYKGNASTGGSDVTYYYSKKLNKDIGSLNIKINIFI CCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEEHHHHCCCCCEEEEEEHHHH LFIVICLNTIILKTQHIDQTIKLSAIYNEYNSNELINSDLGKALDPILSAEDKVSIDLFN HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC SKNLKSGNNNEDFNISKYISSSSEYDSYYTSTLVKMKFKIIGPSLFASLTLIITQGLTVN CCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHEEEEEEECHHHHHHHHHHHHCCCEEE RLYPKNKILNLFISTNKINEVQQYLFSVGYTNNIFIRTVASKKNANDQEQDLIMISMPLL EECCCCCEEEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHCEEEEEEHHH YFNKIEDYLIKIDEDMIINIIGSKAVKGKNFSYTFDNELREKALTEEFMNNGKLMKKIES HHHHHHHHHEEECCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHCC NTIIKTHKKMKKNGVSIQNEV CCEEHHHHHHHHCCCCCCCCC >Mature Secondary Structure ARKKRIKIYSSNGKKALLLSPEEITIVKNDPSYEKNYEIEFNKGKQAFEVRNYYAIGFK CCCEEEEEEECCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCCCEEEECCEEEECHH DLLFVLIGAFLSTIAIDYFISITGNAGLFPGGLGAIARFLSIIGANNITISASTLYFIVY HHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHH FIMNIPLVIFGFIKIGKFSTLTLIYSIISIFFDLILQNIPYINPNEFSLLIDYNLISSLP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCCC GAGAIIIFAFAIFGGMINGFSYSITYKGNASTGGSDVTYYYSKKLNKDIGSLNIKINIFI CCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEEHHHHCCCCCEEEEEEHHHH LFIVICLNTIILKTQHIDQTIKLSAIYNEYNSNELINSDLGKALDPILSAEDKVSIDLFN HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC SKNLKSGNNNEDFNISKYISSSSEYDSYYTSTLVKMKFKIIGPSLFASLTLIITQGLTVN CCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHEEEEEEECHHHHHHHHHHHHCCCEEE RLYPKNKILNLFISTNKINEVQQYLFSVGYTNNIFIRTVASKKNANDQEQDLIMISMPLL EECCCCCEEEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHCEEEEEEHHH YFNKIEDYLIKIDEDMIINIIGSKAVKGKNFSYTFDNELREKALTEEFMNNGKLMKKIES HHHHHHHHHEEECCCCEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHCC NTIIKTHKKMKKNGVSIQNEV CCEEHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1712358 [H]