| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
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The map label for this gene is cshB [H]
Identifier: 50365089
GI number: 50365089
Start: 312673
End: 314055
Strand: Direct
Name: cshB [H]
Synonym: Mfl273
Alternate gene names: 50365089
Gene position: 312673-314055 (Clockwise)
Preceding gene: 50365088
Following gene: 50365090
Centisome position: 39.42
GC content: 27.11
Gene sequence:
>1383_bases ATGTCAAATAATAACGAAAGAAAGTTTAGTGATTTTGGTTTCAAAAAATACATTAATGATACTTTAAAAGAAATAAATTT TGAAACACCAACTAGAATTCAAGCTGAGATAATACCTTTAATCAAGAAACATCAAAATGTTATTGCTCTTTCTCACACAG GAACAGGAAAAACTCATGCTTTTTTACTACCTATTTTAAACAATCTAAGATTTGATCAAGATAAGAAAAATGTACAAGCA TTAATTATTGCACCAACAAGAGAATTGGCAAAACAAATTTTTGATAATGTTAAACCTTTCACAAAAAATGAAACTCAATT GAAAGTAGATTTATTTATTGGTGGAGAGGACATAAATAAACAAATTGAATCTCTAAATAAAAGACAACCAACCATTGCTG TTGGTACACCAACAAGAATTAAAGAATTATATGAACAAAATCATCTTAAAGCTACAACATCAGATTACATTATTATTGAT GAGTGCGACATGATATTTGATTTAGGTTTCATTGAAGATGTTGATTTTGTTGTTTCAAAAGCAAAACAAAATGTAAACTT ATCTATGTTTAGTGCAACTATTCCTGAACAATTAAGACCTTTTGTTTCTAAATATGCTAGAAATGCACATTTTATAGATG TAACTGAAAAAAATGTATCAAGTAAAAACATAAAACACGTTTTAATTGAAACAAAGAATAGAGAAACTGATTTAGTTTTA TCAAATCTTTTAAATTCAATTAATCCATATTTATGCCTTATATTTTCAAACCATAAAGAAGACATTCCTAAGTATGTTAA ATTGATTCGTGAAATAACAGGTCAAAATGTTGGTGAACTACATGGTGATTTACAACCAAGAACAAGAATGAACATGCTTA AAAAAATTAAAAACAATGAGTTTAAGTTTGTTGTTGCAACAGACGTGGCTGCAAGGGGTGTTGACATAATTGGTGTAAGT CATGTTATTTCAATTGATTTACCAACAGATCTTTCATACTACATACACAGAAGTGGAAGAACAGGTAGAAGCAAAATGAC TGGTGAAAGTTATGTTTTATTTAATGTTAAGAATCAAGAAAAAATTGAAGCTCTAGAAAAAATTGGGATTGAATTTATTC GCTTAAGAATGGACAATAATCAACTAATTGAAATAAGAAATAAAAACAAGAAAAAGGCTAAGCATTATGAAGACTTAGAC ACTGATTCAAAAAAAGTTATTGCGAAGTATAGTAATCAAAAAGTTAAACCTGGTTATAAGAAAAAAAGAAAAAGAGAACT TGATGAAATTACAAGAAAAAAACGACGTGAACATATTAAAAAAAGTATTGATAAAATCAAAAAAGAAAAGTACAGAAAAC GACGTGAAGAATTATTTGATTAA
Upstream 100 bases:
>100_bases CATTATATGGAAAACTATTTCATTAATGATATTGAAGAAAGATTGTCAAATAATTTTAAAGATATAAAAATAGAGAAAGT AGATATAAAGGAACAATACT
Downstream 100 bases:
>100_bases TATTTAAAAAAGTAGAATATTCTGCTTTTTATTTTTATATTTTTTAGTATTATTAAAAATAGAAATAATCAAATCAAAGG AAAGTAGATATGGCAAGAAA
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MSNNNERKFSDFGFKKYINDTLKEINFETPTRIQAEIIPLIKKHQNVIALSHTGTGKTHAFLLPILNNLRFDQDKKNVQA LIIAPTRELAKQIFDNVKPFTKNETQLKVDLFIGGEDINKQIESLNKRQPTIAVGTPTRIKELYEQNHLKATTSDYIIID ECDMIFDLGFIEDVDFVVSKAKQNVNLSMFSATIPEQLRPFVSKYARNAHFIDVTEKNVSSKNIKHVLIETKNRETDLVL SNLLNSINPYLCLIFSNHKEDIPKYVKLIREITGQNVGELHGDLQPRTRMNMLKKIKNNEFKFVVATDVAARGVDIIGVS HVISIDLPTDLSYYIHRSGRTGRSKMTGESYVLFNVKNQEKIEALEKIGIEFIRLRMDNNQLIEIRNKNKKKAKHYEDLD TDSKKVIAKYSNQKVKPGYKKKRKRELDEITRKKRREHIKKSIDKIKKEKYRKRREELFD
Sequences:
>Translated_460_residues MSNNNERKFSDFGFKKYINDTLKEINFETPTRIQAEIIPLIKKHQNVIALSHTGTGKTHAFLLPILNNLRFDQDKKNVQA LIIAPTRELAKQIFDNVKPFTKNETQLKVDLFIGGEDINKQIESLNKRQPTIAVGTPTRIKELYEQNHLKATTSDYIIID ECDMIFDLGFIEDVDFVVSKAKQNVNLSMFSATIPEQLRPFVSKYARNAHFIDVTEKNVSSKNIKHVLIETKNRETDLVL SNLLNSINPYLCLIFSNHKEDIPKYVKLIREITGQNVGELHGDLQPRTRMNMLKKIKNNEFKFVVATDVAARGVDIIGVS HVISIDLPTDLSYYIHRSGRTGRSKMTGESYVLFNVKNQEKIEALEKIGIEFIRLRMDNNQLIEIRNKNKKKAKHYEDLD TDSKKVIAKYSNQKVKPGYKKKRKRELDEITRKKRREHIKKSIDKIKKEKYRKRREELFD >Mature_459_residues SNNNERKFSDFGFKKYINDTLKEINFETPTRIQAEIIPLIKKHQNVIALSHTGTGKTHAFLLPILNNLRFDQDKKNVQAL IIAPTRELAKQIFDNVKPFTKNETQLKVDLFIGGEDINKQIESLNKRQPTIAVGTPTRIKELYEQNHLKATTSDYIIIDE CDMIFDLGFIEDVDFVVSKAKQNVNLSMFSATIPEQLRPFVSKYARNAHFIDVTEKNVSSKNIKHVLIETKNRETDLVLS NLLNSINPYLCLIFSNHKEDIPKYVKLIREITGQNVGELHGDLQPRTRMNMLKKIKNNEFKFVVATDVAARGVDIIGVSH VISIDLPTDLSYYIHRSGRTGRSKMTGESYVLFNVKNQEKIEALEKIGIEFIRLRMDNNQLIEIRNKNKKKAKHYEDLDT DSKKVIAKYSNQKVKPGYKKKRKRELDEITRKKRREHIKKSIDKIKKEKYRKRREELFD
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI301171467, Length=371, Percent_Identity=31.266846361186, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI87196351, Length=371, Percent_Identity=31.266846361186, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI301171475, Length=371, Percent_Identity=31.266846361186, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI169881239, Length=371, Percent_Identity=30.9973045822102, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI13514809, Length=371, Percent_Identity=30.9973045822102, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI13129006, Length=385, Percent_Identity=30.6493506493506, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI50659095, Length=387, Percent_Identity=32.0413436692506, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI188035877, Length=350, Percent_Identity=28.5714285714286, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI13514831, Length=410, Percent_Identity=28.5365853658537, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI224593278, Length=352, Percent_Identity=29.5454545454545, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI20149629, Length=439, Percent_Identity=28.4738041002278, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI31542656, Length=450, Percent_Identity=27.5555555555556, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI7661920, Length=341, Percent_Identity=29.6187683284457, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI41327773, Length=376, Percent_Identity=30.8510638297872, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI148613856, Length=367, Percent_Identity=29.1553133514986, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI38201710, Length=367, Percent_Identity=29.1553133514986, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI262118318, Length=368, Percent_Identity=27.445652173913, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI4758138, Length=364, Percent_Identity=28.5714285714286, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI216548263, Length=368, Percent_Identity=27.445652173913, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI262231852, Length=368, Percent_Identity=27.445652173913, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI13518015, Length=368, Percent_Identity=27.445652173913, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI164419743, Length=351, Percent_Identity=28.7749287749288, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI51094101, Length=351, Percent_Identity=28.7749287749288, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI41327771, Length=377, Percent_Identity=28.1167108753316, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI21071032, Length=371, Percent_Identity=28.3018867924528, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI45446747, Length=409, Percent_Identity=28.361858190709, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI45446743, Length=409, Percent_Identity=28.361858190709, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI83700235, Length=343, Percent_Identity=30.6122448979592, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI222352149, Length=347, Percent_Identity=28.2420749279539, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI164664518, Length=371, Percent_Identity=27.2237196765499, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI4503529, Length=343, Percent_Identity=29.7376093294461, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI4758112, Length=359, Percent_Identity=29.2479108635098, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI18375623, Length=359, Percent_Identity=29.2479108635098, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI41327779, Length=351, Percent_Identity=28.4900284900285, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI256223453, Length=367, Percent_Identity=28.6103542234332, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI21040371, Length=357, Percent_Identity=28.2913165266106, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI55749865, Length=369, Percent_Identity=27.3712737127371, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI41327776, Length=441, Percent_Identity=27.437641723356, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI38569505, Length=340, Percent_Identity=27.0588235294118, Blast_Score=125, Evalue=8e-29, Organism=Homo sapiens, GI38569503, Length=340, Percent_Identity=27.0588235294118, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI164419732, Length=363, Percent_Identity=28.099173553719, Blast_Score=123, Evalue=5e-28, Organism=Homo sapiens, GI8922886, Length=348, Percent_Identity=26.1494252873563, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI6005743, Length=348, Percent_Identity=26.4367816091954, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI62241022, Length=330, Percent_Identity=27.2727272727273, Blast_Score=117, Evalue=3e-26, Organism=Homo sapiens, GI256773275, Length=423, Percent_Identity=23.6406619385343, Blast_Score=115, Evalue=8e-26, Organism=Homo sapiens, GI9506931, Length=385, Percent_Identity=25.4545454545455, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI154759257, Length=396, Percent_Identity=25.5050505050505, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI38327634, Length=371, Percent_Identity=25.8760107816712, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI62241024, Length=308, Percent_Identity=27.2727272727273, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI9966805, Length=320, Percent_Identity=27.8125, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI17505907, Length=205, Percent_Identity=28.780487804878, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI20336298, Length=205, Percent_Identity=28.780487804878, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI4826686, Length=69, Percent_Identity=46.3768115942029, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI87082221, Length=401, Percent_Identity=31.1720698254364, Blast_Score=205, Evalue=6e-54, Organism=Escherichia coli, GI1790214, Length=373, Percent_Identity=34.3163538873995, Blast_Score=197, Evalue=8e-52, Organism=Escherichia coli, GI1787016, Length=365, Percent_Identity=32.3287671232877, Blast_Score=187, Evalue=9e-49, Organism=Escherichia coli, GI1787605, Length=327, Percent_Identity=31.4984709480122, Blast_Score=169, Evalue=5e-43, Organism=Escherichia coli, GI1788930, Length=343, Percent_Identity=29.1545189504373, Blast_Score=135, Evalue=8e-33, Organism=Caenorhabditis elegans, GI71995718, Length=376, Percent_Identity=30.5851063829787, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI86570094, Length=366, Percent_Identity=33.0601092896175, Blast_Score=165, Evalue=6e-41, Organism=Caenorhabditis elegans, GI17555296, Length=368, Percent_Identity=30.4347826086957, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17537549, Length=376, Percent_Identity=28.9893617021277, Blast_Score=160, Evalue=9e-40, Organism=Caenorhabditis elegans, GI115533224, Length=349, Percent_Identity=30.6590257879656, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17510309, Length=391, Percent_Identity=28.9002557544757, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI17510307, Length=369, Percent_Identity=29.2682926829268, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI71995514, Length=369, Percent_Identity=29.2682926829268, Blast_Score=157, Evalue=8e-39, Organism=Caenorhabditis elegans, GI71995724, Length=361, Percent_Identity=28.5318559556787, Blast_Score=156, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17507945, Length=389, Percent_Identity=28.5347043701799, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17507121, Length=361, Percent_Identity=28.2548476454294, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17552642, Length=387, Percent_Identity=31.0077519379845, Blast_Score=155, Evalue=6e-38, Organism=Caenorhabditis elegans, GI71987143, Length=339, Percent_Identity=30.3834808259587, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=28.9398280802292, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI71999646, Length=349, Percent_Identity=28.9398280802292, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI71982858, Length=355, Percent_Identity=29.8591549295775, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI17510559, Length=383, Percent_Identity=27.6762402088773, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI115532548, Length=443, Percent_Identity=26.410835214447, Blast_Score=145, Evalue=6e-35, Organism=Caenorhabditis elegans, GI115532546, Length=388, Percent_Identity=26.8041237113402, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI32565321, Length=385, Percent_Identity=28.051948051948, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17507877, Length=374, Percent_Identity=28.3422459893048, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17507879, Length=408, Percent_Identity=28.1862745098039, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17536099, Length=404, Percent_Identity=29.2079207920792, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17536101, Length=404, Percent_Identity=29.2079207920792, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI193206561, Length=336, Percent_Identity=26.7857142857143, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17509811, Length=417, Percent_Identity=25.8992805755396, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17508543, Length=378, Percent_Identity=26.1904761904762, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17536103, Length=405, Percent_Identity=29.8765432098765, Blast_Score=134, Evalue=8e-32, Organism=Caenorhabditis elegans, GI17507641, Length=383, Percent_Identity=26.1096605744125, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17507881, Length=403, Percent_Identity=25.5583126550869, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17552114, Length=360, Percent_Identity=25.8333333333333, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI32564046, Length=376, Percent_Identity=26.5957446808511, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17556951, Length=350, Percent_Identity=26.2857142857143, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=29.3193717277487, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI71982862, Length=205, Percent_Identity=34.6341463414634, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI193208216, Length=365, Percent_Identity=28.2191780821918, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI25148203, Length=396, Percent_Identity=23.4848484848485, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17505370, Length=351, Percent_Identity=27.3504273504274, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17553716, Length=342, Percent_Identity=24.2690058479532, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71997889, Length=358, Percent_Identity=25.1396648044693, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI25148291, Length=335, Percent_Identity=25.3731343283582, Blast_Score=92, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6324778, Length=371, Percent_Identity=32.0754716981132, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6325138, Length=382, Percent_Identity=31.6753926701571, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6321360, Length=344, Percent_Identity=32.8488372093023, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6324217, Length=384, Percent_Identity=29.9479166666667, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6320173, Length=400, Percent_Identity=27, Blast_Score=161, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6321111, Length=382, Percent_Identity=28.5340314136126, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=27.7777777777778, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6321856, Length=400, Percent_Identity=30.25, Blast_Score=157, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6320400, Length=386, Percent_Identity=30.8290155440415, Blast_Score=151, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6322427, Length=356, Percent_Identity=30.0561797752809, Blast_Score=149, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6324620, Length=399, Percent_Identity=30.5764411027569, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6320224, Length=358, Percent_Identity=29.3296089385475, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6321963, Length=384, Percent_Identity=27.34375, Blast_Score=147, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6320119, Length=361, Percent_Identity=28.5318559556787, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6321267, Length=342, Percent_Identity=29.8245614035088, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6319714, Length=405, Percent_Identity=26.6666666666667, Blast_Score=140, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6320041, Length=370, Percent_Identity=27.5675675675676, Blast_Score=134, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6319618, Length=417, Percent_Identity=28.7769784172662, Blast_Score=133, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6320449, Length=363, Percent_Identity=28.099173553719, Blast_Score=132, Evalue=8e-32, Organism=Saccharomyces cerevisiae, GI6322912, Length=333, Percent_Identity=30.03003003003, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6322323, Length=333, Percent_Identity=30.03003003003, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=28.4931506849315, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323306, Length=406, Percent_Identity=23.8916256157635, Blast_Score=114, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6322876, Length=188, Percent_Identity=30.8510638297872, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17985987, Length=391, Percent_Identity=30.1790281329923, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24644483, Length=366, Percent_Identity=30.327868852459, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI281361218, Length=366, Percent_Identity=30.327868852459, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24644481, Length=366, Percent_Identity=30.327868852459, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24644479, Length=366, Percent_Identity=30.0546448087432, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI24644487, Length=366, Percent_Identity=30.327868852459, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI45551833, Length=366, Percent_Identity=30.327868852459, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI24644485, Length=366, Percent_Identity=30.327868852459, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI28574962, Length=369, Percent_Identity=30.3523035230352, Blast_Score=168, Evalue=8e-42, Organism=Drosophila melanogaster, GI24584399, Length=361, Percent_Identity=29.3628808864266, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI21356161, Length=371, Percent_Identity=30.9973045822102, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI28575014, Length=355, Percent_Identity=29.5774647887324, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24642151, Length=361, Percent_Identity=29.6398891966759, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI17977678, Length=371, Percent_Identity=29.1105121293801, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI24585582, Length=386, Percent_Identity=27.4611398963731, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI21355075, Length=354, Percent_Identity=30.7909604519774, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI18857967, Length=379, Percent_Identity=27.7044854881267, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24584994, Length=381, Percent_Identity=28.8713910761155, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI24645031, Length=319, Percent_Identity=30.4075235109718, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI24662330, Length=362, Percent_Identity=29.2817679558011, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI24581954, Length=359, Percent_Identity=29.8050139275766, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24581952, Length=359, Percent_Identity=29.8050139275766, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24581956, Length=359, Percent_Identity=29.8050139275766, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24642822, Length=428, Percent_Identity=27.3364485981308, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI21355559, Length=411, Percent_Identity=27.007299270073, Blast_Score=145, Evalue=8e-35, Organism=Drosophila melanogaster, GI24666101, Length=370, Percent_Identity=28.3783783783784, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI17136814, Length=492, Percent_Identity=27.0325203252033, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI24583281, Length=372, Percent_Identity=26.0752688172043, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24583279, Length=365, Percent_Identity=26.5753424657534, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI17647335, Length=346, Percent_Identity=26.5895953757225, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI24582080, Length=334, Percent_Identity=29.0419161676647, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI24582078, Length=334, Percent_Identity=29.0419161676647, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI17136248, Length=334, Percent_Identity=29.0419161676647, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI24582075, Length=334, Percent_Identity=29.0419161676647, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=27.9365079365079, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI28571808, Length=419, Percent_Identity=28.4009546539379, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI28571809, Length=419, Percent_Identity=28.4009546539379, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI20130173, Length=432, Percent_Identity=26.3888888888889, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI19920478, Length=372, Percent_Identity=26.0752688172043, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI24668515, Length=320, Percent_Identity=25.625, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24643725, Length=393, Percent_Identity=22.3918575063613, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI24640164, Length=349, Percent_Identity=23.2091690544413, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI18859659, Length=207, Percent_Identity=28.9855072463768, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI28571338, Length=207, Percent_Identity=28.9855072463768, Blast_Score=84, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 53503; Mature: 53371
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNNERKFSDFGFKKYINDTLKEINFETPTRIQAEIIPLIKKHQNVIALSHTGTGKTHA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCE FLLPILNNLRFDQDKKNVQALIIAPTRELAKQIFDNVKPFTKNETQLKVDLFIGGEDINK EHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHH QIESLNKRQPTIAVGTPTRIKELYEQNHLKATTSDYIIIDECDMIFDLGFIEDVDFVVSK HHHHHHCCCCEEEECCCHHHHHHHHHCCCEECCCCEEEEECCCHHEECCCHHHHHHHHHH AKQNVNLSMFSATIPEQLRPFVSKYARNAHFIDVTEKNVSSKNIKHVLIETKNRETDLVL HHCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHH SNLLNSINPYLCLIFSNHKEDIPKYVKLIREITGQNVGELHGDLQPRTRMNMLKKIKNNE HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCC FKFVVATDVAARGVDIIGVSHVISIDLPTDLSYYIHRSGRTGRSKMTGESYVLFNVKNQE EEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHH KIEALEKIGIEFIRLRMDNNQLIEIRNKNKKKAKHYEDLDTDSKKVIAKYSNQKVKPGYK HHHHHHHHCCEEEEEEECCCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCHH KKRKRELDEITRKKRREHIKKSIDKIKKEKYRKRREELFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNNNERKFSDFGFKKYINDTLKEINFETPTRIQAEIIPLIKKHQNVIALSHTGTGKTHA CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCE FLLPILNNLRFDQDKKNVQALIIAPTRELAKQIFDNVKPFTKNETQLKVDLFIGGEDINK EHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHH QIESLNKRQPTIAVGTPTRIKELYEQNHLKATTSDYIIIDECDMIFDLGFIEDVDFVVSK HHHHHHCCCCEEEECCCHHHHHHHHHCCCEECCCCEEEEECCCHHEECCCHHHHHHHHHH AKQNVNLSMFSATIPEQLRPFVSKYARNAHFIDVTEKNVSSKNIKHVLIETKNRETDLVL HHCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHH SNLLNSINPYLCLIFSNHKEDIPKYVKLIREITGQNVGELHGDLQPRTRMNMLKKIKNNE HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCC FKFVVATDVAARGVDIIGVSHVISIDLPTDLSYYIHRSGRTGRSKMTGESYVLFNVKNQE EEEEEEECCCCCCEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHH KIEALEKIGIEFIRLRMDNNQLIEIRNKNKKKAKHYEDLDTDSKKVIAKYSNQKVKPGYK HHHHHHHHCCEEEEEEECCCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCHH KKRKRELDEITRKKRREHIKKSIDKIKKEKYRKRREELFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]