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The map label for this gene is recO [H]

Identifier: 50365083

GI number: 50365083

Start: 305656

End: 306459

Strand: Direct

Name: recO [H]

Synonym: Mfl267

Alternate gene names: 50365083

Gene position: 305656-306459 (Clockwise)

Preceding gene: 50365082

Following gene: 50365084

Centisome position: 38.53

GC content: 22.39

Gene sequence:

>804_bases
ATGAGTGAAGTAAAAATCAGAGGAATAGTTTTAGATTCTTTAAATTATGAAGAAAATGACAAAATTATTACAGTTTATTC
TGATGAATTTGGGAAACTAAGTTTTATTGCTCTAGGTGCTAATAAAGCATCAAGCAAAAATAATTACTCACTTAATGTAT
TTTCTGAATCTGATTTTGAAATATTTAAATCAAGAAAAACACAATCAATTTCAAAATTAAAAACTGGAATATTAGTAAGA
AATAATTTTAAAATTGCAAAATCATATAATAATTATTTATTTGCAAGCATTATAAGTTCAGTTATTTTACAAGAAGAACT
TTTTTATAACAAAGATTTTAAATTATTTGATATGTTAAGAGAAGCTATAAGAAATATTAATGATGAGGTAAACCCTTTTT
CAAATATGGTTTGATTTCTTTTTTACTCATTAAAAAATTTTGGTGGATACTGAGAATTAAATAAATGTTATCGTTGTAAC
AAAGCAAGTAAGATTTATAGAAAATTTGATCTTCAACATTATGGTTTAGTTTGTCCTAATTGTATTAATGAAAATGAAGA
AGAACATGATTATGAATTTATTAAATATTTACAAAGAATGGATAATAACACTTTTTTCACTATTCAAAAATTTCCTATAA
ACGTTTCTTTTGAAATAATAATTTCTAAATTACTTTTTAGCTATTATCTTAACGAAATAGGAATATATTCATACCCGATG
AATGAAATTTTAAAGAAAGAAGTTTACAAAGATGACACCTTTTGAGAGTACACTCATAAAGTGTTGACAAAAAATAGTAT
TTAA

Upstream 100 bases:

>100_bases
AAAAAGATGTTAATCTAGAATTATTTGTAAAAGTCCAAGAGAATTGAAGAAACTCTGCAAGTTTAATTAAAAAGATGGGA
TACGACAAGGATAAATACTA

Downstream 100 bases:

>100_bases
AGGTAAAATCATTTATAATTGAAATAGTTTTATGTCAGCCAAATGCTGACTTTTGTTATTTTATATACAAGACTATTAAG
GAGAAAAAAATATGGAAAAA

Product: DNA repair/recombination protein

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSEVKIRGIVLDSLNYEENDKIITVYSDEFGKLSFIALGANKASSKNNYSLNVFSESDFEIFKSRKTQSISKLKTGILVR
NNFKIAKSYNNYLFASIISSVILQEELFYNKDFKLFDMLREAIRNINDEVNPFSNMVWFLFYSLKNFGGYWELNKCYRCN
KASKIYRKFDLQHYGLVCPNCINENEEEHDYEFIKYLQRMDNNTFFTIQKFPINVSFEIIISKLLFSYYLNEIGIYSYPM
NEILKKEVYKDDTFWEYTHKVLTKNSI

Sequences:

>Translated_267_residues
MSEVKIRGIVLDSLNYEENDKIITVYSDEFGKLSFIALGANKASSKNNYSLNVFSESDFEIFKSRKTQSISKLKTGILVR
NNFKIAKSYNNYLFASIISSVILQEELFYNKDFKLFDMLREAIRNINDEVNPFSNMV*FLFYSLKNFGGY*ELNKCYRCN
KASKIYRKFDLQHYGLVCPNCINENEEEHDYEFIKYLQRMDNNTFFTIQKFPINVSFEIIISKLLFSYYLNEIGIYSYPM
NEILKKEVYKDDTF*EYTHKVLTKNSI
>Mature_266_residues
SEVKIRGIVLDSLNYEENDKIITVYSDEFGKLSFIALGANKASSKNNYSLNVFSESDFEIFKSRKTQSISKLKTGILVRN
NFKIAKSYNNYLFASIISSVILQEELFYNKDFKLFDMLREAIRNINDEVNPFSNMV*FLFYSLKNFGGY*ELNKCYRCNK
ASKIYRKFDLQHYGLVCPNCINENEEEHDYEFIKYLQRMDNNTFFTIQKFPINVSFEIIISKLLFSYYLNEIGIYSYPMN
EILKKEVYKDDTF*EYTHKVLTKNSI

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 31154; Mature: 31023

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVKIRGIVLDSLNYEENDKIITVYSDEFGKLSFIALGANKASSKNNYSLNVFSESDFE
CCCEEEEEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHH
IFKSRKTQSISKLKTGILVRNNFKIAKSYNNYLFASIISSVILQEELFYNKDFKLFDMLR
HHHHHHHHHHHHHHHCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
EAIRNINDEVNPFSNMVFLFYSLKNFGGYELNKCYRCNKASKIYRKFDLQHYGLVCPNCI
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCHHC
NENEEEHDYEFIKYLQRMDNNTFFTIQKFPINVSFEIIISKLLFSYYLNEIGIYSYPMNE
CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
ILKKEVYKDDTFEYTHKVLTKNSI
HHHHHHCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEVKIRGIVLDSLNYEENDKIITVYSDEFGKLSFIALGANKASSKNNYSLNVFSESDFE
CCEEEEEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHH
IFKSRKTQSISKLKTGILVRNNFKIAKSYNNYLFASIISSVILQEELFYNKDFKLFDMLR
HHHHHHHHHHHHHHHCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
EAIRNINDEVNPFSNMVFLFYSLKNFGGYELNKCYRCNKASKIYRKFDLQHYGLVCPNCI
HHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCHHC
NENEEEHDYEFIKYLQRMDNNTFFTIQKFPINVSFEIIISKLLFSYYLNEIGIYSYPMNE
CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
ILKKEVYKDDTFEYTHKVLTKNSI
HHHHHHCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA