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The map label for this gene is ymdB [H]

Identifier: 50365055

GI number: 50365055

Start: 265710

End: 266474

Strand: Direct

Name: ymdB [H]

Synonym: Mfl239

Alternate gene names: 50365055

Gene position: 265710-266474 (Clockwise)

Preceding gene: 50365054

Following gene: 50365056

Centisome position: 33.5

GC content: 29.28

Gene sequence:

>765_bases
ATGAAAGTACTAATGATAGGAGATGTCTTTGCCAAACCAGGAAGAGACGTTTTTAAACAAAACATTGAAAAATTAATAAA
TGACAATCAAGTAGACTTTGTTGTTGTTAATGGTGAAAACACAACTCATGGTAAATCAATTTCAAAAGAACACTACAACT
TTTATAAAGAGAATCATGTTGACGTTATAACAAGTGGAAATCATATTTTTAAAAATCCAGAAGTTTTAGATTACATTCAA
AATACTCCTGATCTTTTAAAACCAATGAACATGTATAAGACACCTGGAAGTGGTTATGTAGTTATTGAAAAGAATAATAA
AAAAATTTGTGTTCTGAATTTAATGGGAAATAATTTTATGGATCCTTCAAACAGTGTTTATGAAACTATGGAAGATTTTT
TAGGTTTAAAAATAGCCTATGATATATTACTTGTTGATTTTCATGCTGAAACAACAGCTGAAAAAATAGCTTTTGCTTTA
AATTATGATGGTATCATAACAGGATTTGTTGGGACACATACACACGTCCAAACAGCAGACGAAAGAATACTTCCAAAAGG
TACAGCATTTATTACAGACTTAGGCATGAGTGGGGTTATTGATTCTGTTATTGGTATAGAAGCAAGTGATGCTATTTATA
AGCAAAAAACAGGTTTAGTTAAACGTTTTCAACCTGCTAAAGGTAAAGCAAAACTTAATGGAGTAATCATTGAAATTGAT
GAAAAATCTAACAAAGCTACAAACATCAAAAGAATAAGTATTTAA

Upstream 100 bases:

>100_bases
ATCACAAAAAAATATCAATTAATGAATTGCTAGAAAAAAATAAAAATTCAAAAAACGAAGAAGTTTTAAATTTAATTAAA
AAAATAGAAGAGGTCATTTA

Downstream 100 bases:

>100_bases
AAGCAAATTATTTGCTTTTTTTGTTTCAGATTTTTAAACCGATTTAGTATAATTTATATTGATATCGCAGAAGGGAAAAT
GGAAAAATGAGAAAATTATT

Product: putative putative phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKVLMIGDVFAKPGRDVFKQNIEKLINDNQVDFVVVNGENTTHGKSISKEHYNFYKENHVDVITSGNHIFKNPEVLDYIQ
NTPDLLKPMNMYKTPGSGYVVIEKNNKKICVLNLMGNNFMDPSNSVYETMEDFLGLKIAYDILLVDFHAETTAEKIAFAL
NYDGIITGFVGTHTHVQTADERILPKGTAFITDLGMSGVIDSVIGIEASDAIYKQKTGLVKRFQPAKGKAKLNGVIIEID
EKSNKATNIKRISI

Sequences:

>Translated_254_residues
MKVLMIGDVFAKPGRDVFKQNIEKLINDNQVDFVVVNGENTTHGKSISKEHYNFYKENHVDVITSGNHIFKNPEVLDYIQ
NTPDLLKPMNMYKTPGSGYVVIEKNNKKICVLNLMGNNFMDPSNSVYETMEDFLGLKIAYDILLVDFHAETTAEKIAFAL
NYDGIITGFVGTHTHVQTADERILPKGTAFITDLGMSGVIDSVIGIEASDAIYKQKTGLVKRFQPAKGKAKLNGVIIEID
EKSNKATNIKRISI
>Mature_254_residues
MKVLMIGDVFAKPGRDVFKQNIEKLINDNQVDFVVVNGENTTHGKSISKEHYNFYKENHVDVITSGNHIFKNPEVLDYIQ
NTPDLLKPMNMYKTPGSGYVVIEKNNKKICVLNLMGNNFMDPSNSVYETMEDFLGLKIAYDILLVDFHAETTAEKIAFAL
NYDGIITGFVGTHTHVQTADERILPKGTAFITDLGMSGVIDSVIGIEASDAIYKQKTGLVKRFQPAKGKAKLNGVIIEID
EKSNKATNIKRISI

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28319; Mature: 28319

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLMIGDVFAKPGRDVFKQNIEKLINDNQVDFVVVNGENTTHGKSISKEHYNFYKENHV
CEEEEEEHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCE
DVITSGNHIFKNPEVLDYIQNTPDLLKPMNMYKTPGSGYVVIEKNNKKICVLNLMGNNFM
EEEECCCEEECCCHHHHHHCCCHHHHCCHHHHCCCCCCEEEEECCCCEEEEEEECCCCCC
DPSNSVYETMEDFLGLKIAYDILLVDFHAETTAEKIAFALNYDGIITGFVGTHTHVQTAD
CCCHHHHHHHHHHHCCEEEEEEEEEEECCCCCHHHEEEEEECCCEEEECCCCCCEEECCC
ERILPKGTAFITDLGMSGVIDSVIGIEASDAIYKQKTGLVKRFQPAKGKAKLNGVIIEID
CCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCCCEEECEEEEEEE
EKSNKATNIKRISI
CCCCCCCCEEEECC
>Mature Secondary Structure
MKVLMIGDVFAKPGRDVFKQNIEKLINDNQVDFVVVNGENTTHGKSISKEHYNFYKENHV
CEEEEEEHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCE
DVITSGNHIFKNPEVLDYIQNTPDLLKPMNMYKTPGSGYVVIEKNNKKICVLNLMGNNFM
EEEECCCEEECCCHHHHHHCCCHHHHCCHHHHCCCCCCEEEEECCCCEEEEEEECCCCCC
DPSNSVYETMEDFLGLKIAYDILLVDFHAETTAEKIAFALNYDGIITGFVGTHTHVQTAD
CCCHHHHHHHHHHHCCEEEEEEEEEEECCCCCHHHEEEEEECCCEEEECCCCCCEEECCC
ERILPKGTAFITDLGMSGVIDSVIGIEASDAIYKQKTGLVKRFQPAKGKAKLNGVIIEID
CCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCCCEEECEEEEEEE
EKSNKATNIKRISI
CCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]