Click here to switch to the map view.

The map label for this gene is rpmI

Identifier: 50365005

GI number: 50365005

Start: 218332

End: 218526

Strand: Direct

Name: rpmI

Synonym: Mfl189

Alternate gene names: 50365005

Gene position: 218332-218526 (Clockwise)

Preceding gene: 50365004

Following gene: 50365006

Centisome position: 27.52

GC content: 29.74

Gene sequence:

>195_bases
ATGCCAAAAATGAAATCAAAAAAATCATTAGCAAAAAGAGTTATTGCTAAGAAAAACGGTACTTTAAAAAGAGGTAAAGC
TTACAGATCTCACCGTGCTACAGGTAAAACTACAAAACAAAAACGTCACTTAGAAAAAGCTACAATCGTTCATGTAACAG
ACATGAAACGTATTAAAGGTTTATTACAAAAATAA

Upstream 100 bases:

>100_bases
GCTAAAATTGAAAAAGAAGCTAAGTTAACTTCAAGATTCTTAGATATGTACGTTGTGCCAAAGAAATAATTAGAAAAGTA
TTGAAAGGAAATTAAGTATT

Downstream 100 bases:

>100_bases
GAAAGGTAAAAGGAAAATAAGTTATGGCAAGAGTTAAATTTGGAAAAGTAACTAGAGCAAGAAGAAAACGTTGAATCAAA
CGTGCAAAAGGTTACTATGG

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MPKMKSKKSLAKRVIAKKNGTLKRGKAYRSHRATGKTTKQKRHLEKATIVHVTDMKRIKGLLQK

Sequences:

>Translated_64_residues
MPKMKSKKSLAKRVIAKKNGTLKRGKAYRSHRATGKTTKQKRHLEKATIVHVTDMKRIKGLLQK
>Mature_63_residues
PKMKSKKSLAKRVIAKKNGTLKRGKAYRSHRATGKTTKQKRHLEKATIVHVTDMKRIKGLLQK

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL35_MESFL (Q6F1S7)

Other databases:

- EMBL:   AE017263
- RefSeq:   YP_053430.1
- ProteinModelPortal:   Q6F1S7
- SMR:   Q6F1S7
- GeneID:   2897692
- GenomeReviews:   AE017263_GR
- KEGG:   mfl:Mfl189
- HOGENOM:   HBG734125
- OMA:   HLAQNKT
- ProtClustDB:   PRK00172
- BioCyc:   MFLO265311:MFL189-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00514
- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706
- PRINTS:   PR00064
- TIGRFAMs:   TIGR00001

Pfam domain/function: PF01632 Ribosomal_L35p

EC number: NA

Molecular weight: Translated: 7340; Mature: 7209

Theoretical pI: Translated: 12.34; Mature: 12.34

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKMKSKKSLAKRVIAKKNGTLKRGKAYRSHRATGKTTKQKRHLEKATIVHVTDMKRIKG
CCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLQK
HHCC
>Mature Secondary Structure 
PKMKSKKSLAKRVIAKKNGTLKRGKAYRSHRATGKTTKQKRHLEKATIVHVTDMKRIKG
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLQK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA