Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is yfnB [H]
Identifier: 49188245
GI number: 49188245
Start: 5143289
End: 5143984
Strand: Reverse
Name: yfnB [H]
Synonym: BAS5260
Alternate gene names: 49188245
Gene position: 5143984-5143289 (Counterclockwise)
Preceding gene: 49188247
Following gene: 49188243
Centisome position: 98.38
GC content: 31.61
Gene sequence:
>696_bases ATGAAAAAATATAAAACACTATTATTTGATGTGGATGATACATTGTTAGATTTTCAAAAGGCTGAGAGGATAGCGTTACG TATGCTTTTTGAGGAGAAAGGAATTCCTCTAACTAGTGAGATTGAAGCGCAGTATAAAAAAGTTAATAAAGGTCTTTGGG ATGATTTTGAAGAAGGTAAAATAAATTGTGATGAAGTAGTAAATACAAGATTTTCAGTTTTATTTAAAGAATATGGACAA GAAGTGGATGGGATATTATTTGAAAATAATTATCGCAACTACTTAGAAGAAGGGAATCAACTCATACAAGGTGCATTTGA ATTTATAAATCAAATTGAAAGTGAGTATGATTTATATATAGTGACAAACGGTGTTTCGAAGACGCAATATAAACGTTTAC GTAATGCAGGGTTACATTCAATGTTTAAAGATATTTTCGTTTCTGAAGATACAGGTTATCAAAAGCCAATGAAAGAGTAT TTTGATTATGTTTTTGAAAGAATTCCTAATTTTGCTCCTGAAGAAGGGCTCATTATTGGGGATTCGTTAAGCGCTGATAT GAGAGGTGGATATGTAGCGGGAATTGATACTTGTTGGTTTAATCCAGAAAAGAAATTAAATGATAGCAAGATTGTGCCGA CATATGAAGTGCAAAATTTTGAAGAGTTATACGTGTTATTGAAGCAACGTGTGTAA
Upstream 100 bases:
>100_bases ACCTCATATTTAGTATGAGATATCTCCTATTATTTTTACAAGAAAGAATGCTACGATTTACGTAAATTTGTTTTTGTAGA AAAGAGAGTGTGAGGGGCTT
Downstream 100 bases:
>100_bases TAAAAAATAGGCAGTGGAACTTTAGTCCCTACTGCCCATTTTTATTCGTTTGTAGCTTCGTTGTTTTTAGGAAGTGGAAA TGCATTACCAATTGCTGCCG
Product: HAD superfamily hydrolase
Products: (R)-2-hydroxyacid; halide
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKKYKTLLFDVDDTLLDFQKAERIALRMLFEEKGIPLTSEIEAQYKKVNKGLWDDFEEGKINCDEVVNTRFSVLFKEYGQ EVDGILFENNYRNYLEEGNQLIQGAFEFINQIESEYDLYIVTNGVSKTQYKRLRNAGLHSMFKDIFVSEDTGYQKPMKEY FDYVFERIPNFAPEEGLIIGDSLSADMRGGYVAGIDTCWFNPEKKLNDSKIVPTYEVQNFEELYVLLKQRV
Sequences:
>Translated_231_residues MKKYKTLLFDVDDTLLDFQKAERIALRMLFEEKGIPLTSEIEAQYKKVNKGLWDDFEEGKINCDEVVNTRFSVLFKEYGQ EVDGILFENNYRNYLEEGNQLIQGAFEFINQIESEYDLYIVTNGVSKTQYKRLRNAGLHSMFKDIFVSEDTGYQKPMKEY FDYVFERIPNFAPEEGLIIGDSLSADMRGGYVAGIDTCWFNPEKKLNDSKIVPTYEVQNFEELYVLLKQRV >Mature_231_residues MKKYKTLLFDVDDTLLDFQKAERIALRMLFEEKGIPLTSEIEAQYKKVNKGLWDDFEEGKINCDEVVNTRFSVLFKEYGQ EVDGILFENNYRNYLEEGNQLIQGAFEFINQIESEYDLYIVTNGVSKTQYKRLRNAGLHSMFKDIFVSEDTGYQKPMKEY FDYVFERIPNFAPEEGLIIGDSLSADMRGGYVAGIDTCWFNPEKKLNDSKIVPTYEVQNFEELYVLLKQRV
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. YjjG family [H]
Homologues:
Organism=Escherichia coli, GI1790833, Length=225, Percent_Identity=32.8888888888889, Blast_Score=120, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR011951 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: 3.8.1.2
Molecular weight: Translated: 27080; Mature: 27080
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYKTLLFDVDDTLLDFQKAERIALRMLFEEKGIPLTSEIEAQYKKVNKGLWDDFEEGK CCCHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHCCC INCDEVVNTRFSVLFKEYGQEVDGILFENNYRNYLEEGNQLIQGAFEFINQIESEYDLYI CCHHHHHHHHHHHHHHHHCHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VTNGVSKTQYKRLRNAGLHSMFKDIFVSEDTGYQKPMKEYFDYVFERIPNFAPEEGLIIG EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEC DSLSADMRGGYVAGIDTCWFNPEKKLNDSKIVPTYEVQNFEELYVLLKQRV CCCCCCCCCCEEEEEHHEECCCHHCCCCCCCCCCHHHCCHHHHHHHHHHCC >Mature Secondary Structure MKKYKTLLFDVDDTLLDFQKAERIALRMLFEEKGIPLTSEIEAQYKKVNKGLWDDFEEGK CCCHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHCCC INCDEVVNTRFSVLFKEYGQEVDGILFENNYRNYLEEGNQLIQGAFEFINQIESEYDLYI CCHHHHHHHHHHHHHHHHCHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VTNGVSKTQYKRLRNAGLHSMFKDIFVSEDTGYQKPMKEYFDYVFERIPNFAPEEGLIIG EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEC DSLSADMRGGYVAGIDTCWFNPEKKLNDSKIVPTYEVQNFEELYVLLKQRV CCCCCCCCCCEEEEEHHEECCCHHCCCCCCCCCCHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (S)-2-haloacid; H2O
Specific reaction: (S)-2-haloacid + H2O = (R)-2-hydroxyacid + halide
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9141694; 9384377 [H]