Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
---|---|
Accession | NC_005945 |
Length | 5,228,663 |
Click here to switch to the map view.
The map label for this gene is ypmR [H]
Identifier: 49188238
GI number: 49188238
Start: 5135297
End: 5136106
Strand: Reverse
Name: ypmR [H]
Synonym: BAS5253
Alternate gene names: 49188238
Gene position: 5136106-5135297 (Counterclockwise)
Preceding gene: 49188239
Following gene: 49188237
Centisome position: 98.23
GC content: 32.72
Gene sequence:
>810_bases ATGAGATCAAAAGTGGTAAAAGTAATTCTACTCATTACAATTGCATCTTTCTGTTTATTTGCATATGGCTTTGTTTCAGG TGTAAATGATGTATTAAATCCGAGAGCTTCAAATTTAATTAAAAAAACCGATGTAGTAGCAAAAGAGAAAAAGAAAACAG GAACGTTACAAATCGTTAGTTTAGGTGATTCATTAACACGCGGTGTTGGTGATAAAGAAGGAATTGGCTATATTGGACGA ATGAAAGAAGATTTACAAAAAGATTATAAGCAAAAGGTTGCTTTAACGAACTTAGCTGTTAGTGGTGCGAAAATGCCTGA CTTATTAAAACAAATTGAGAGTAATGGCGCTCAATATTCAATTAAACAAGCAGATGTAATCGTTTTAACGATTGGAGGAA ATGATTTATTTCCGGGCTGGGAATCGCTTGGAAAGATAGATTTAGAAACATATCGTCCGGATACGGAAACATTCCAGAAT GAAGCGAAGAAAATTATAGAAGAAATTCGTAAATTAAATACAGATAGCCCTATTTTTTGGCTAGGTTTATATAATCCTTT TGAAGATGTAGAAGATTTAAAGGGGTCTTCAAACATTGTTGTAGACTGGAATGCATCTTTAGAAAAGTTAGCGATAAATA ATAAAAATGTGTATATTACACCGACATTTGATTTATTCCAAAATCGTGGGAAAGATTTATTATACTCCGATCATTTCCAT CCGAATGAAGTAGGGTATACATATATGGCGGACCGATTAGTTCAAAATGTTGTAAGTAAATTAAAACTAGAACAAGGAGG GGTAAAATGA
Upstream 100 bases:
>100_bases AAAAGGGAAACGACATAATAGATAAGGTGTGAAAATCGCTTTTCAAAATTGCGTTTGGTATAATTATGGACAATCTATGA GGGCTAAAAGGGGTTTTGAT
Downstream 100 bases:
>100_bases CAACGATACTTTCCGTACGAGACGTGAAGAAGGTAATTGGAAAGAAGACAATTGTAGAGAATATTTCCTTCGATGTAAAA CAAGGAGAAGTGTTCGGCTT
Product: lipase/acylhydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MRSKVVKVILLITIASFCLFAYGFVSGVNDVLNPRASNLIKKTDVVAKEKKKTGTLQIVSLGDSLTRGVGDKEGIGYIGR MKEDLQKDYKQKVALTNLAVSGAKMPDLLKQIESNGAQYSIKQADVIVLTIGGNDLFPGWESLGKIDLETYRPDTETFQN EAKKIIEEIRKLNTDSPIFWLGLYNPFEDVEDLKGSSNIVVDWNASLEKLAINNKNVYITPTFDLFQNRGKDLLYSDHFH PNEVGYTYMADRLVQNVVSKLKLEQGGVK
Sequences:
>Translated_269_residues MRSKVVKVILLITIASFCLFAYGFVSGVNDVLNPRASNLIKKTDVVAKEKKKTGTLQIVSLGDSLTRGVGDKEGIGYIGR MKEDLQKDYKQKVALTNLAVSGAKMPDLLKQIESNGAQYSIKQADVIVLTIGGNDLFPGWESLGKIDLETYRPDTETFQN EAKKIIEEIRKLNTDSPIFWLGLYNPFEDVEDLKGSSNIVVDWNASLEKLAINNKNVYITPTFDLFQNRGKDLLYSDHFH PNEVGYTYMADRLVQNVVSKLKLEQGGVK >Mature_269_residues MRSKVVKVILLITIASFCLFAYGFVSGVNDVLNPRASNLIKKTDVVAKEKKKTGTLQIVSLGDSLTRGVGDKEGIGYIGR MKEDLQKDYKQKVALTNLAVSGAKMPDLLKQIESNGAQYSIKQADVIVLTIGGNDLFPGWESLGKIDLETYRPDTETFQN EAKKIIEEIRKLNTDSPIFWLGLYNPFEDVEDLKGSSNIVVDWNASLEKLAINNKNVYITPTFDLFQNRGKDLLYSDHFH PNEVGYTYMADRLVQNVVSKLKLEQGGVK
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR001087 [H]
Pfam domain/function: PF00657 Lipase_GDSL [H]
EC number: NA
Molecular weight: Translated: 30057; Mature: 30057
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSKVVKVILLITIASFCLFAYGFVSGVNDVLNPRASNLIKKTDVVAKEKKKTGTLQIVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEE LGDSLTRGVGDKEGIGYIGRMKEDLQKDYKQKVALTNLAVSGAKMPDLLKQIESNGAQYS CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE IKQADVIVLTIGGNDLFPGWESLGKIDLETYRPDTETFQNEAKKIIEEIRKLNTDSPIFW EECCCEEEEEECCCCCCCCHHHHCCEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE LGLYNPFEDVEDLKGSSNIVVDWNASLEKLAINNKNVYITPTFDLFQNRGKDLLYSDHFH EECCCCHHHHHHCCCCCCEEEEECCCEEHEEECCCEEEEEECHHHHHCCCCCCEEECCCC PNEVGYTYMADRLVQNVVSKLKLEQGGVK CCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRSKVVKVILLITIASFCLFAYGFVSGVNDVLNPRASNLIKKTDVVAKEKKKTGTLQIVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEE LGDSLTRGVGDKEGIGYIGRMKEDLQKDYKQKVALTNLAVSGAKMPDLLKQIESNGAQYS CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEE IKQADVIVLTIGGNDLFPGWESLGKIDLETYRPDTETFQNEAKKIIEEIRKLNTDSPIFW EECCCEEEEEECCCCCCCCHHHHCCEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE LGLYNPFEDVEDLKGSSNIVVDWNASLEKLAINNKNVYITPTFDLFQNRGKDLLYSDHFH EECCCCHHHHHHCCCCCCEEEEECCCEEHEEECCCEEEEEECHHHHHCCCCCCEEECCCC PNEVGYTYMADRLVQNVVSKLKLEQGGVK CCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3145906 [H]