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The map label for this gene is yvfS [H]

Identifier: 49188188

GI number: 49188188

Start: 5085723

End: 5086457

Strand: Reverse

Name: yvfS [H]

Synonym: BAS5202

Alternate gene names: 49188188

Gene position: 5086457-5085723 (Counterclockwise)

Preceding gene: 49188189

Following gene: 49188187

Centisome position: 97.28

GC content: 36.33

Gene sequence:

>735_bases
ATGAGGGCGTTATGGATGCAGTGCAAAATAGAAGTTTTACGTACATTTCGTAATAAATTGTTTATCTTTTTCTCATTATT
AATGCCAGTTATGTTTTACTATATTTTCACAAATGTTGTTCAAGTGCCGCAAAACGGTGATGCATGGAAAGCACACTATT
TAATTTCGATGGCAACCTTCAGTATTGTAGGGACGGCACTTTTTAGTTTCGGTGTTAGAATTTCTCAAGAAAAAGGGCAA
GGATGGACACATCTTTTAAAAATTACACCGCTTCCAGAAGGTGCATATTTAACAGCAAAGATCATCGCTCAAACAGTAGT
AAATGCTTTTTCAATATTAGTTATCTTTATTGCAGGGGTATTAATTAATCATGTGGAGTTAACGGTAGGGCAGTGGATTG
GTGCTGGATTATGGTTATTGTTAGGGGTAACACCATTTTTAGCACTTGGAACAGTAATAGGCTCTATTAAGAAGGCAGAT
GCAGCTGCTGGCTTAGCGAATATTTTAAATATGAGTTTAGCTGTAATTGGTGGGCTATGGATGCCGATTGAAGTATTTCC
AAAAATATTGAGAACAATTGGTGAATGGACACCGACATATCATTTTGGAAGTGGTGCGTGGGACATTGTAGCTGGAAAAT
CAATTGGATGGGAAAATATCGCGGTACTAGGAGGTTATTTCCTTATATTTGTTGTAATATCAATATATATAAGAAAAAGA
CAGGAAGCGGTATAA

Upstream 100 bases:

>100_bases
TTTATCAAAAGAACTTACCTGTAACAGATGTTTCTGTTGAACGTGGAAGTCTTGATGAAGCATTTGAACAGTTTGTCGCA
AATCAGAAGGAGGAAATCGC

Downstream 100 bases:

>100_bases
ATGATAGAGAAGAAGAGGATTGAGATTTTTCCGAAACATATGGGTTTCTTCCCGTATATGTGGTTCGTTTATCTATTATT
TCCAATTTACCATTTAGTGC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MRALWMQCKIEVLRTFRNKLFIFFSLLMPVMFYYIFTNVVQVPQNGDAWKAHYLISMATFSIVGTALFSFGVRISQEKGQ
GWTHLLKITPLPEGAYLTAKIIAQTVVNAFSILVIFIAGVLINHVELTVGQWIGAGLWLLLGVTPFLALGTVIGSIKKAD
AAAGLANILNMSLAVIGGLWMPIEVFPKILRTIGEWTPTYHFGSGAWDIVAGKSIGWENIAVLGGYFLIFVVISIYIRKR
QEAV

Sequences:

>Translated_244_residues
MRALWMQCKIEVLRTFRNKLFIFFSLLMPVMFYYIFTNVVQVPQNGDAWKAHYLISMATFSIVGTALFSFGVRISQEKGQ
GWTHLLKITPLPEGAYLTAKIIAQTVVNAFSILVIFIAGVLINHVELTVGQWIGAGLWLLLGVTPFLALGTVIGSIKKAD
AAAGLANILNMSLAVIGGLWMPIEVFPKILRTIGEWTPTYHFGSGAWDIVAGKSIGWENIAVLGGYFLIFVVISIYIRKR
QEAV
>Mature_244_residues
MRALWMQCKIEVLRTFRNKLFIFFSLLMPVMFYYIFTNVVQVPQNGDAWKAHYLISMATFSIVGTALFSFGVRISQEKGQ
GWTHLLKITPLPEGAYLTAKIIAQTVVNAFSILVIFIAGVLINHVELTVGQWIGAGLWLLLGVTPFLALGTVIGSIKKAD
AAAGLANILNMSLAVIGGLWMPIEVFPKILRTIGEWTPTYHFGSGAWDIVAGKSIGWENIAVLGGYFLIFVVISIYIRKR
QEAV

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27012; Mature: 27012

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALWMQCKIEVLRTFRNKLFIFFSLLMPVMFYYIFTNVVQVPQNGDAWKAHYLISMATF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
SIVGTALFSFGVRISQEKGQGWTHLLKITPLPEGAYLTAKIIAQTVVNAFSILVIFIAGV
HHHHHHHHHHCCEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LINHVELTVGQWIGAGLWLLLGVTPFLALGTVIGSIKKADAAAGLANILNMSLAVIGGLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MPIEVFPKILRTIGEWTPTYHFGSGAWDIVAGKSIGWENIAVLGGYFLIFVVISIYIRKR
CCHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QEAV
HCCC
>Mature Secondary Structure
MRALWMQCKIEVLRTFRNKLFIFFSLLMPVMFYYIFTNVVQVPQNGDAWKAHYLISMATF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
SIVGTALFSFGVRISQEKGQGWTHLLKITPLPEGAYLTAKIIAQTVVNAFSILVIFIAGV
HHHHHHHHHHCCEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LINHVELTVGQWIGAGLWLLLGVTPFLALGTVIGSIKKADAAAGLANILNMSLAVIGGLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MPIEVFPKILRTIGEWTPTYHFGSGAWDIVAGKSIGWENIAVLGGYFLIFVVISIYIRKR
CCHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QEAV
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]