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The map label for this gene is yvfT [H]

Identifier: 49188187

GI number: 49188187

Start: 5084592

End: 5085722

Strand: Reverse

Name: yvfT [H]

Synonym: BAS5201

Alternate gene names: 49188187

Gene position: 5085722-5084592 (Counterclockwise)

Preceding gene: 49188188

Following gene: 49188186

Centisome position: 97.27

GC content: 35.37

Gene sequence:

>1131_bases
ATGATAGAGAAGAAGAGGATTGAGATTTTTCCGAAACATATGGGTTTCTTCCCGTATATGTGGTTCGTTTATCTATTATT
TCCAATTTACCATTTAGTGCAGGCGTCAGGGTGGAAGCTTATAATTGGGAGCGGTATGTTGATAATTTTTATTATCACAT
ACCGTCAACTTTATTTTGTGCAGAGAACGTTTATTTTTTTGGCATGTATTCAAATGATACTCATCTTTTTATTTGCTTTA
TTTTACAATCCTTTTATGATATTCTTTGGCTTTTTCACGGCAAGTGCGATGGGATTTGCACCAAGTAAGAAAGTATTTCG
GGTATTACTATGTTTGTTAGTTATAATGCTTGGAGCATTTGTATTTGTAAATATGAATCAACTAACACCGACAAGTTTAG
TAAATATCGTTCCAATGTTTATTTTAATGATTCTTACACCATTTGGTATGCGCAACTTTAATCAGAAAAAAATGTTAAGA
AATCAATTAAATGAAGCGAATGAGCAAATTAAAGACTTAGTAAAACGTGAAGAACGGCAGCGGATTGCAAGAGATCTTCA
TGATACGTTAGGGCATACATTATCACTCATTACTTTAAAAAGTCAGCTCGTGGAGAAGTTAATTGTAAAAAATCCGGAGC
GTGCAAGTACGGAAGCGAAGGAAATTACACAAACATCTCGCACTGCTTTAAAGCAGCTAAGGGAATTAATTTCTGATATG
CGTATGATTACAGTAGAAGAAGAGCTTGAGCAAATAAAAGCAATCTTACAAGCTGCTAATATTAGATTAGAGATTAAACA
AGAAACGAGTGCGAGTTCTTTATCACCAATTGAACAAAATATTTTAGGAATGTGTTTACGTGAGGCAGTGACGAATGTTG
TAAAGCATAGTAAGGCGACGCGTTGCACAGTTTCTGTACTAGAATCACAAGGCGAATTAATTTTGACGGTAGAAGATAAC
GGAATTGGCTTAGCAGATCAAAACCATGATGGAAATGGCATTCGTGGTATGAAAGAGCGTATTGCTCTTATTGATGGATC
TGTTGAACTGGATATGATTAATCCAGGGACACTATTAACAGTAAAAGTTCCAGTTGTTATTCGAACAGGAAAAGATGGGG
TGAGGGCATGA

Upstream 100 bases:

>100_bases
AAAATCAATTGGATGGGAAAATATCGCGGTACTAGGAGGTTATTTCCTTATATTTGTTGTAATATCAATATATATAAGAA
AAAGACAGGAAGCGGTATAA

Downstream 100 bases:

>100_bases
TTCGAATTATTATTGCAGAAGATCAGCGGATGCTTCGTGGTGCATTAGGGGCCCTGCTTGATTTAGAAGATGATATTGAA
GTAATTGGGCAAGCTGCGAA

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MIEKKRIEIFPKHMGFFPYMWFVYLLFPIYHLVQASGWKLIIGSGMLIIFIITYRQLYFVQRTFIFLACIQMILIFLFAL
FYNPFMIFFGFFTASAMGFAPSKKVFRVLLCLLVIMLGAFVFVNMNQLTPTSLVNIVPMFILMILTPFGMRNFNQKKMLR
NQLNEANEQIKDLVKREERQRIARDLHDTLGHTLSLITLKSQLVEKLIVKNPERASTEAKEITQTSRTALKQLRELISDM
RMITVEEELEQIKAILQAANIRLEIKQETSASSLSPIEQNILGMCLREAVTNVVKHSKATRCTVSVLESQGELILTVEDN
GIGLADQNHDGNGIRGMKERIALIDGSVELDMINPGTLLTVKVPVVIRTGKDGVRA

Sequences:

>Translated_376_residues
MIEKKRIEIFPKHMGFFPYMWFVYLLFPIYHLVQASGWKLIIGSGMLIIFIITYRQLYFVQRTFIFLACIQMILIFLFAL
FYNPFMIFFGFFTASAMGFAPSKKVFRVLLCLLVIMLGAFVFVNMNQLTPTSLVNIVPMFILMILTPFGMRNFNQKKMLR
NQLNEANEQIKDLVKREERQRIARDLHDTLGHTLSLITLKSQLVEKLIVKNPERASTEAKEITQTSRTALKQLRELISDM
RMITVEEELEQIKAILQAANIRLEIKQETSASSLSPIEQNILGMCLREAVTNVVKHSKATRCTVSVLESQGELILTVEDN
GIGLADQNHDGNGIRGMKERIALIDGSVELDMINPGTLLTVKVPVVIRTGKDGVRA
>Mature_376_residues
MIEKKRIEIFPKHMGFFPYMWFVYLLFPIYHLVQASGWKLIIGSGMLIIFIITYRQLYFVQRTFIFLACIQMILIFLFAL
FYNPFMIFFGFFTASAMGFAPSKKVFRVLLCLLVIMLGAFVFVNMNQLTPTSLVNIVPMFILMILTPFGMRNFNQKKMLR
NQLNEANEQIKDLVKREERQRIARDLHDTLGHTLSLITLKSQLVEKLIVKNPERASTEAKEITQTSRTALKQLRELISDM
RMITVEEELEQIKAILQAANIRLEIKQETSASSLSPIEQNILGMCLREAVTNVVKHSKATRCTVSVLESQGELILTVEDN
GIGLADQNHDGNGIRGMKERIALIDGSVELDMINPGTLLTVKVPVVIRTGKDGVRA

Specific function: Member of the two-component regulatory system yvfT/yvfU. Probably activates yvfU by phosphorylation [H]

COG id: COG4585

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788812, Length=208, Percent_Identity=27.8846153846154, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87082311, Length=227, Percent_Identity=27.7533039647577, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787474, Length=195, Percent_Identity=29.2307692307692, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011712 [H]

Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 42882; Mature: 42882

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50109 HIS_KIN ; PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKKRIEIFPKHMGFFPYMWFVYLLFPIYHLVQASGWKLIIGSGMLIIFIITYRQLYFV
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHH
QRTFIFLACIQMILIFLFALFYNPFMIFFGFFTASAMGFAPSKKVFRVLLCLLVIMLGAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VFVNMNQLTPTSLVNIVPMFILMILTPFGMRNFNQKKMLRNQLNEANEQIKDLVKREERQ
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RIARDLHDTLGHTLSLITLKSQLVEKLIVKNPERASTEAKEITQTSRTALKQLRELISDM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RMITVEEELEQIKAILQAANIRLEIKQETSASSLSPIEQNILGMCLREAVTNVVKHSKAT
HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
RCTVSVLESQGELILTVEDNGIGLADQNHDGNGIRGMKERIALIDGSVELDMINPGTLLT
HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCEEEE
VKVPVVIRTGKDGVRA
EEEEEEEECCCCCCCC
>Mature Secondary Structure
MIEKKRIEIFPKHMGFFPYMWFVYLLFPIYHLVQASGWKLIIGSGMLIIFIITYRQLYFV
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHH
QRTFIFLACIQMILIFLFALFYNPFMIFFGFFTASAMGFAPSKKVFRVLLCLLVIMLGAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VFVNMNQLTPTSLVNIVPMFILMILTPFGMRNFNQKKMLRNQLNEANEQIKDLVKREERQ
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RIARDLHDTLGHTLSLITLKSQLVEKLIVKNPERASTEAKEITQTSRTALKQLRELISDM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RMITVEEELEQIKAILQAANIRLEIKQETSASSLSPIEQNILGMCLREAVTNVVKHSKAT
HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH
RCTVSVLESQGELILTVEDNGIGLADQNHDGNGIRGMKERIALIDGSVELDMINPGTLLT
HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCEEEE
VKVPVVIRTGKDGVRA
EEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]