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The map label for this gene is yknZ [H]

Identifier: 49188090

GI number: 49188090

Start: 4983696

End: 4984895

Strand: Reverse

Name: yknZ [H]

Synonym: BAS5104

Alternate gene names: 49188090

Gene position: 4984895-4983696 (Counterclockwise)

Preceding gene: 49188091

Following gene: 49188089

Centisome position: 95.34

GC content: 37.25

Gene sequence:

>1200_bases
ATGAGTTTACTAGATAGTATAAAAATTGCCCTCTCTTCTATTTTAGCTCATAAACTGCGTTCAGCTCTTACGATGCTCGG
TATTATTATCGGTGTTGGTTCCATTATTACTGTCGTTGCGATTGGGCAAGGCGGGGAAGCTGCATTGAAATCGCAGTTCG
TTGGGGCAGGTAATCAAACGGTTCCGATTCATTATAGTGCAGATATAAACGATCCTTTCGGTATGGGAATGGTAGAAGCA
CCGAAGATAACTGAAGAAGACATTTTTGAAATTAAAAAAATTCCAGAAATTTCACATGTGGTAACAACAAATTCCAGTAT
GGAACCACTTGATATTGAAGATAAAAAAGAAATGGTGAGTATTACTGGATTAGATAGTGAGTACTTTGCAGTAAATAAAG
TAAAGTTGTTAAAGGGACGTTCTTTACAAGAATCAGATGTGGATCAAGGTAATAACGTTGTCATGATTAGTAAACAAATG
GAAGAAAAGGTGTTTAAGGATGCCAATCCAGTCGGTAAAATTATTGAAATGAAAGGTCAACCGATGCAAATTATCGGTGT
CTACAAATCAGATAATGAGTTTATGGGAATGGGACCATCAGAAGCACTAGTGCCAATTTCATTATGGCCGACACTGTATG
GAAAAGATGAAATTCAAAATATTTCTGTTCAAGCAAAAAATGTAGATAATCTAGAAAAAGCAGGTAAAAAAGCTGCAGAT
GTTTTAAATAGTCGTAAACCGACTGATGCAACTGGTAAATATGAAGTTATGAATTTAAAAGAAATTCAAGAAGGTATTTC
GAAGATGACTGGTATTATGACAATGATCATCGGTGGTATCGCTGGTATTTCATTAGTTGTTGGTGGAATTGGTGTTATGA
ACATTATGCTCGTATCTGTAACGGAGCGTACGCGCGAAATTGGTGTACGTAAAGCGCTTGGAGCAACACGTAGTAAAATT
TTATTACAGTTTTTAATTGAAGCCGTTATGTTAACGCTTCTAGGTGGTTTGATCGGAATTGGTCTTGGATATGGCGGAGC
ATATATCGTTTCCACATTCGCAAAATGGCCACCACTCGTTTCATGGGAAGTTGTCGTTGGAGGCGTACTGTTCTCTATGA
CACTCGGTATTATCTTTGGATTAATTCCAGCAAACAAAGCTGCGAAATTAGATCCAATTGAAGCACTTCGTTATGAGTAA

Upstream 100 bases:

>100_bases
CAATTGTTATGGTTACGCATGAAGAGGAAGTAGCAGCGTATTCTTCCCGCCGCATCGTACTGCGAGACGGGAAAATTACA
GAAGATAGAAGGTGTGCGGT

Downstream 100 bases:

>100_bases
GTAATCGTGTAGTAGAACTACACACTACCGTTCTAGTGGGCGGTTCGTAGCCTCTATATGAGGAAGTGAACCGCCCGTTA
GAACGGGTTATATAAATAGA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGAGNQTVPIHYSADINDPFGMGMVEA
PKITEEDIFEIKKIPEISHVVTTNSSMEPLDIEDKKEMVSITGLDSEYFAVNKVKLLKGRSLQESDVDQGNNVVMISKQM
EEKVFKDANPVGKIIEMKGQPMQIIGVYKSDNEFMGMGPSEALVPISLWPTLYGKDEIQNISVQAKNVDNLEKAGKKAAD
VLNSRKPTDATGKYEVMNLKEIQEGISKMTGIMTMIIGGIAGISLVVGGIGVMNIMLVSVTERTREIGVRKALGATRSKI
LLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE

Sequences:

>Translated_399_residues
MSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGAGNQTVPIHYSADINDPFGMGMVEA
PKITEEDIFEIKKIPEISHVVTTNSSMEPLDIEDKKEMVSITGLDSEYFAVNKVKLLKGRSLQESDVDQGNNVVMISKQM
EEKVFKDANPVGKIIEMKGQPMQIIGVYKSDNEFMGMGPSEALVPISLWPTLYGKDEIQNISVQAKNVDNLEKAGKKAAD
VLNSRKPTDATGKYEVMNLKEIQEGISKMTGIMTMIIGGIAGISLVVGGIGVMNIMLVSVTERTREIGVRKALGATRSKI
LLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE
>Mature_398_residues
SLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGAGNQTVPIHYSADINDPFGMGMVEAP
KITEEDIFEIKKIPEISHVVTTNSSMEPLDIEDKKEMVSITGLDSEYFAVNKVKLLKGRSLQESDVDQGNNVVMISKQME
EKVFKDANPVGKIIEMKGQPMQIIGVYKSDNEFMGMGPSEALVPISLWPTLYGKDEIQNISVQAKNVDNLEKAGKKAADV
LNSRKPTDATGKYEVMNLKEIQEGISKMTGIMTMIIGGIAGISLVVGGIGVMNIMLVSVTERTREIGVRKALGATRSKIL
LQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=408, Percent_Identity=30.3921568627451, Blast_Score=169, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 42855; Mature: 42724

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGAGNQT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCE
VPIHYSADINDPFGMGMVEAPKITEEDIFEIKKIPEISHVVTTNSSMEPLDIEDKKEMVS
EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCHHEEE
ITGLDSEYFAVNKVKLLKGRSLQESDVDQGNNVVMISKQMEEKVFKDANPVGKIIEMKGQ
EECCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHCCCC
PMQIIGVYKSDNEFMGMGPSEALVPISLWPTLYGKDEIQNISVQAKNVDNLEKAGKKAAD
CEEEEEEEECCCCEECCCCCCCEEEEEECCCCCCCHHHCEEEEEECCCHHHHHHHHHHHH
VLNSRKPTDATGKYEVMNLKEIQEGISKMTGIMTMIIGGIAGISLVVGGIGVMNIMLVSV
HHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TERTREIGVRKALGATRSKILLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCE
SWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE
EHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
SLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGAGNQT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCE
VPIHYSADINDPFGMGMVEAPKITEEDIFEIKKIPEISHVVTTNSSMEPLDIEDKKEMVS
EEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHEEEECCCCCCCCCCCCCHHEEE
ITGLDSEYFAVNKVKLLKGRSLQESDVDQGNNVVMISKQMEEKVFKDANPVGKIIEMKGQ
EECCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHCCCC
PMQIIGVYKSDNEFMGMGPSEALVPISLWPTLYGKDEIQNISVQAKNVDNLEKAGKKAAD
CEEEEEEEECCCCEECCCCCCCEEEEEECCCCCCCHHHCEEEEEECCCHHHHHHHHHHHH
VLNSRKPTDATGKYEVMNLKEIQEGISKMTGIMTMIIGGIAGISLVVGGIGVMNIMLVSV
HHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TERTREIGVRKALGATRSKILLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCE
SWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE
EHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]