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The map label for this gene is yknW [H]

Identifier: 49188089

GI number: 49188089

Start: 4982881

End: 4983582

Strand: Reverse

Name: yknW [H]

Synonym: BAS5103

Alternate gene names: 49188089

Gene position: 4983582-4982881 (Counterclockwise)

Preceding gene: 49188090

Following gene: 49188088

Centisome position: 95.31

GC content: 33.76

Gene sequence:

>702_bases
ATGGAAGCTAATGTGAATACGCAAAAAGCTGGTGGCGAGAAGCCATCATTGTTTGGAATGATTACTTCTCCTGGTTTACA
GTTTGAGAGAATGAAGACGACTGAGAAAGTTTGGGGTATGTTCTTCATAGTGGCAATATTACAAGGGCTTGTAGGTGGTT
TAAATTCGTATATTACGTATACATCACCTGAAATGATTGAAATGCAAAAGAAATTAGGAGGCGAATTTGCAAATAAGGAT
TCGCTTGTATCAGATGTAATTTCTAGTACGATATGGGGAATAGTAGGTGTTATGATTGCAACATTAGTTGTTGCAGCTAT
TTATAAAGTGTTCATGATGTTTTACGGGAATGATACTTCTTATAAAAAAATAGTAATGATTATTGTATACGCAGATATTA
TTGTTATTATTGGTGGACTTATTAATGGTGTTATAGCTTTAATTTTAGGTGCTGGACCAACTGCGTATACAAGTTTAGGA
CCACTATTCGATCAAGGTTCACTTGCATATGGAATTGGTAATACAATTGAATTGTTCTATTTATGGAATTTAGTTTTAAT
TTGGTTAGGATTACAAGTTACAGCCGGATTAAGTAAAGTGAAAGCAGCTATTCCAATTATTGTTTTATTCATTATTAAAG
CGGGATTCTTAGCTGCGATTGTTGTATTGATTGCAAAGTTCTTACCTGGTTTGCCTGTATAA

Upstream 100 bases:

>100_bases
AGAACTACACACTACCGTTCTAGTGGGCGGTTCGTAGCCTCTATATGAGGAAGTGAACCGCCCGTTAGAACGGGTTATAT
AAATAGAAGGAGGCGTTATA

Downstream 100 bases:

>100_bases
TAATATGATTGAATTAAAAGGTGGCTCTTCGGAGTCACCTTTTTTATTTTTACCCCTATTTCAAATACCACTAACAGAAT
TTCAAATTCTACTTCATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MEANVNTQKAGGEKPSLFGMITSPGLQFERMKTTEKVWGMFFIVAILQGLVGGLNSYITYTSPEMIEMQKKLGGEFANKD
SLVSDVISSTIWGIVGVMIATLVVAAIYKVFMMFYGNDTSYKKIVMIIVYADIIVIIGGLINGVIALILGAGPTAYTSLG
PLFDQGSLAYGIGNTIELFYLWNLVLIWLGLQVTAGLSKVKAAIPIIVLFIIKAGFLAAIVVLIAKFLPGLPV

Sequences:

>Translated_233_residues
MEANVNTQKAGGEKPSLFGMITSPGLQFERMKTTEKVWGMFFIVAILQGLVGGLNSYITYTSPEMIEMQKKLGGEFANKD
SLVSDVISSTIWGIVGVMIATLVVAAIYKVFMMFYGNDTSYKKIVMIIVYADIIVIIGGLINGVIALILGAGPTAYTSLG
PLFDQGSLAYGIGNTIELFYLWNLVLIWLGLQVTAGLSKVKAAIPIIVLFIIKAGFLAAIVVLIAKFLPGLPV
>Mature_233_residues
MEANVNTQKAGGEKPSLFGMITSPGLQFERMKTTEKVWGMFFIVAILQGLVGGLNSYITYTSPEMIEMQKKLGGEFANKD
SLVSDVISSTIWGIVGVMIATLVVAAIYKVFMMFYGNDTSYKKIVMIIVYADIIVIIGGLINGVIALILGAGPTAYTSLG
PLFDQGSLAYGIGNTIELFYLWNLVLIWLGLQVTAGLSKVKAAIPIIVLFIIKAGFLAAIVVLIAKFLPGLPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006977 [H]

Pfam domain/function: PF04893 Yip1 [H]

EC number: NA

Molecular weight: Translated: 25038; Mature: 25038

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEANVNTQKAGGEKPSLFGMITSPGLQFERMKTTEKVWGMFFIVAILQGLVGGLNSYITY
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEC
TSPEMIEMQKKLGGEFANKDSLVSDVISSTIWGIVGVMIATLVVAAIYKVFMMFYGNDTS
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YKKIVMIIVYADIIVIIGGLINGVIALILGAGPTAYTSLGPLFDQGSLAYGIGNTIELFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEECCCCHHHHHH
LWNLVLIWLGLQVTAGLSKVKAAIPIIVLFIIKAGFLAAIVVLIAKFLPGLPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEANVNTQKAGGEKPSLFGMITSPGLQFERMKTTEKVWGMFFIVAILQGLVGGLNSYITY
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEC
TSPEMIEMQKKLGGEFANKDSLVSDVISSTIWGIVGVMIATLVVAAIYKVFMMFYGNDTS
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YKKIVMIIVYADIIVIIGGLINGVIALILGAGPTAYTSLGPLFDQGSLAYGIGNTIELFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEECCCCHHHHHH
LWNLVLIWLGLQVTAGLSKVKAAIPIIVLFIIKAGFLAAIVVLIAKFLPGLPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]