Click here to switch to the map view.

The map label for this gene is yobT [H]

Identifier: 49187863

GI number: 49187863

Start: 4752419

End: 4753141

Strand: Reverse

Name: yobT [H]

Synonym: BAS4874

Alternate gene names: 49187863

Gene position: 4753141-4752419 (Counterclockwise)

Preceding gene: 49187864

Following gene: 49187862

Centisome position: 90.91

GC content: 40.53

Gene sequence:

>723_bases
ATGAGAATGATGCATGAAAAAACGGTATATCAATTGTCATTTTTGCCAAGAGTGTTTCCTGTGAATTGTTACTTTGTGGA
GGAAGAAGATGGTTTAACTTTAATTGATGCTGCTTTGCCATATAGCGCAAAAGGAATTTTACAGGCGGCTGAGAAAATAG
GAAAACCAATTACGAATATTGTATTAACACATGCGCATGATGATCACATCGGTGCATTAGACGCATTAAAGGAAGTACTT
CCTCATGTTCCAGTCTATATTTCTAAGCGAGACGCAAAGCTATTAGAAGGCGATACGACGTTACAAAAGAATGAACCAAA
TACGCCAATAAAAGGCGGTGTACCTAAAAAGGTGAAAACGGCACCTGATATTTTATTAGAAGATAGTGACCGAGTTGGAT
CGCTTCTTGCGATTATGACACCGGGACATACGCCAGGCTCTATGTCGTTTCTTGATGTACGAAATAAAGCTCTTATTGTT
GGGGATGCATTTCAAACAAGAGGAGGTACGGCTGTTTCGGGACAAATGAAATTTTGGTTTCCGTTTCCTGCGATGGCAAC
GTGGAGTAAAGAAATGGCATTACAAAGTGCAGAGAAGTTAAGAGAATATGAGCCGTCCTTGCTTGCGGCAGGGCATGGAA
AAATGATAAACGATCCAGAGGCTGTCATAGAGCTTGCTATTCAGGAAGCAAAGCGGAATATAGAAAGTAGAAAAGAGGGT
TAA

Upstream 100 bases:

>100_bases
TCTTTTTTCTGAAAAAATGAAATTTTTAGTGGTATAAAACTAATACCATTAGTATAATAAAACTAATGGTATTAGTTTTC
GTGAAAAGGGAGATGGGAAT

Downstream 100 bases:

>100_bases
TTGATGTCGCCGAGAATCGGACTTACATTACCGAAAATTGTAGAAACAGCAGTAGAAATTGCAGATGCAAATGGAATACA
AGAAGTAACGTTAGCTTCAT

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRMMHEKTVYQLSFLPRVFPVNCYFVEEEDGLTLIDAALPYSAKGILQAAEKIGKPITNIVLTHAHDDHIGALDALKEVL
PHVPVYISKRDAKLLEGDTTLQKNEPNTPIKGGVPKKVKTAPDILLEDSDRVGSLLAIMTPGHTPGSMSFLDVRNKALIV
GDAFQTRGGTAVSGQMKFWFPFPAMATWSKEMALQSAEKLREYEPSLLAAGHGKMINDPEAVIELAIQEAKRNIESRKEG

Sequences:

>Translated_240_residues
MRMMHEKTVYQLSFLPRVFPVNCYFVEEEDGLTLIDAALPYSAKGILQAAEKIGKPITNIVLTHAHDDHIGALDALKEVL
PHVPVYISKRDAKLLEGDTTLQKNEPNTPIKGGVPKKVKTAPDILLEDSDRVGSLLAIMTPGHTPGSMSFLDVRNKALIV
GDAFQTRGGTAVSGQMKFWFPFPAMATWSKEMALQSAEKLREYEPSLLAAGHGKMINDPEAVIELAIQEAKRNIESRKEG
>Mature_240_residues
MRMMHEKTVYQLSFLPRVFPVNCYFVEEEDGLTLIDAALPYSAKGILQAAEKIGKPITNIVLTHAHDDHIGALDALKEVL
PHVPVYISKRDAKLLEGDTTLQKNEPNTPIKGGVPKKVKTAPDILLEDSDRVGSLLAIMTPGHTPGSMSFLDVRNKALIV
GDAFQTRGGTAVSGQMKFWFPFPAMATWSKEMALQSAEKLREYEPSLLAAGHGKMINDPEAVIELAIQEAKRNIESRKEG

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 26403; Mature: 26403

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMMHEKTVYQLSFLPRVFPVNCYFVEEEDGLTLIDAALPYSAKGILQAAEKIGKPITNI
CCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHE
VLTHAHDDHIGALDALKEVLPHVPVYISKRDAKLLEGDTTLQKNEPNTPIKGGVPKKVKT
EEECCCCCCCHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
APDILLEDSDRVGSLLAIMTPGHTPGSMSFLDVRNKALIVGDAFQTRGGTAVSGQMKFWF
CCCEEECCCCCCCCEEEEECCCCCCCCCEEEEECCCEEEEECCHHCCCCEEEECCEEEEE
PFPAMATWSKEMALQSAEKLREYEPSLLAAGHGKMINDPEAVIELAIQEAKRNIESRKEG
CCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRMMHEKTVYQLSFLPRVFPVNCYFVEEEDGLTLIDAALPYSAKGILQAAEKIGKPITNI
CCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHE
VLTHAHDDHIGALDALKEVLPHVPVYISKRDAKLLEGDTTLQKNEPNTPIKGGVPKKVKT
EEECCCCCCCHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
APDILLEDSDRVGSLLAIMTPGHTPGSMSFLDVRNKALIVGDAFQTRGGTAVSGQMKFWF
CCCEEECCCCCCCCEEEEECCCCCCCCCEEEEECCCEEEEECCHHCCCCEEEECCEEEEE
PFPAMATWSKEMALQSAEKLREYEPSLLAAGHGKMINDPEAVIELAIQEAKRNIESRKEG
CCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]