Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is sufD [H]
Identifier: 49187840
GI number: 49187840
Start: 4735176
End: 4736468
Strand: Reverse
Name: sufD [H]
Synonym: BAS4850
Alternate gene names: 49187840
Gene position: 4736468-4735176 (Counterclockwise)
Preceding gene: 49187841
Following gene: 49187839
Centisome position: 90.59
GC content: 41.84
Gene sequence:
>1293_bases ATGACAATCGGTACATTACCTTTCGATCAAGAAACAATCCGTCAACGCGCAAGCGAAGTAAACGAAGCAGCTTGGTTGAC TGAGTTCCGCTTACAAGCTCTTGCACAAGCAACTGAACTTCCAATGCCAACGCCTGATAAAACGAAAATTGAAAAATGGG ACTTTATCGGAAAAGGCGACGCTGCTAAGCAAGAGCCTGTAAGTTCTTTAACAGAGCTTCCAGAAGCAGTGAAAAACTTA ATTGATGAAAATAACAGCGTATTAGTGCAACGTACTGGTACAACTGCATTCGTTTCGTTAGCAGACGAAGCAAAAGAAAA AGGTGTTATTTTCACAGACATCGTAACAGCTGCAACTGAGCATGCTGAACTAGTACAAAAGTACTTAATGAAAGACGGCG TGAAGGTAGACGAGCATCGTCTAACTGCACTTCATGCTGCATTAATCAACGGCGGTGCATTCGTATATGTTCCGAAAAAC GTTGTTCTTGAAACTCCACTTCAAGCTGTATTCTTAGTAGACGGCGAAGAAGCTAACGTATATAACCACGTATTATTCGT AGCTGATGCGAACAGTACTGCAACTTATGTAGAAAACTACGTTGCAAATGAAAATGCTAAAGGTATTGCAAATATCGTAG CAGAAGTAATCGTGGAACAAGGCGCACAAGTGAAATTCGGTGCGGTTGATCTATTAGCAAAAGACGTAACAACTTACGTT AACCGCCGCGGGGTTGTAGGACGCGACGGCCGTATTGATTGGGCTCTAGGCCTTATGAACGACGGAAACACAATTTCAGA GAACGTTACAAACTTAATGGGCGACGGTTCATATGCTGATACGAAAACAGTAACAATTGGCCGTGGTAACCAAACACAAA ACTTTACAACTAAAGTTGTTCACTTCGGTAAACATTCTGAAGGTTGGATTTTAAAACACGGTGTACAAAAAGATAGTGCA ACATCTATCTTTAACGGAATTGGTAAGATTGAACACGGTGCATCTAAATCAAATGCACAACAATCTTCTCGCGTTCTTAT GTTAGATGAAAAAGCTCGCGGTGATGCAAGCCCAATTCTTTTAATCGACGAAGATGATGTAATGGCAGGTCACGCAGCGT CAGTAGGTCGCGTAGATCCAGTCCAACTATACTACTTGATGAGCCGTGGTATTCCAAAACGCGAAGCAGAACGTTTAGTC ATCCATGGATTCTTAGCACCTGTAGTTAATGAGCTTCCAATTGAAGGAGTAAAAGCACAGCTTGTTGAGGTAATTGAAAG GAAAGTTCGCTAA
Upstream 100 bases:
>100_bases TGCACAACGTCTAGAAGCTGAAGGTTACGACTGGATTAAAAAAGAATTAGGTATTGAAGACGAAACAACAGAGCAAGAAG CGTAAGAGAGGAGCATAAAC
Downstream 100 bases:
>100_bases TGAATATTCATGAAATACGCAAACAGTTTCCAATTCTTGATCAAAAAGTGAACGGCAAACAACTTGTTTATTTCGATAGT GCAGCAACTTCTCAAAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MTIGTLPFDQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDFIGKGDAAKQEPVSSLTELPEAVKNL IDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKN VVLETPLQAVFLVDGEEANVYNHVLFVADANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYV NRRGVVGRDGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSA TSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDASPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERLV IHGFLAPVVNELPIEGVKAQLVEVIERKVR
Sequences:
>Translated_430_residues MTIGTLPFDQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDFIGKGDAAKQEPVSSLTELPEAVKNL IDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKN VVLETPLQAVFLVDGEEANVYNHVLFVADANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYV NRRGVVGRDGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSA TSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDASPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERLV IHGFLAPVVNELPIEGVKAQLVEVIERKVR >Mature_429_residues TIGTLPFDQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDFIGKGDAAKQEPVSSLTELPEAVKNLI DENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATEHAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNV VLETPLQAVFLVDGEEANVYNHVLFVADANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYVN RRGVVGRDGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVVHFGKHSEGWILKHGVQKDSAT SIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDASPILLIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERLVI HGFLAPVVNELPIEGVKAQLVEVIERKVR
Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro
COG id: COG0719
COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0051 (ycf24) family [H]
Homologues:
Organism=Escherichia coli, GI87081955, Length=446, Percent_Identity=25.3363228699552, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1787971, Length=262, Percent_Identity=27.4809160305344, Blast_Score=89, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000825 - InterPro: IPR011542 [H]
Pfam domain/function: PF01458 UPF0051 [H]
EC number: NA
Molecular weight: Translated: 46858; Mature: 46726
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIGTLPFDQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDFIGKGD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCC AAKQEPVSSLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATE CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEHHHHHHCCEEEEHHHHHHHH HAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANV HHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCEEEEECCCEEEECCCEEEEEEECCCCCE YNHVLFVADANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYV EEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH NRRGVVGRDGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVV HCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEE HFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDASPIL EECCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCCCCCCEE LIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQ EECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH LVEVIERKVR HHHHHHHHCC >Mature Secondary Structure TIGTLPFDQETIRQRASEVNEAAWLTEFRLQALAQATELPMPTPDKTKIEKWDFIGKGD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCC AAKQEPVSSLTELPEAVKNLIDENNSVLVQRTGTTAFVSLADEAKEKGVIFTDIVTAATE CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEHHHHHHCCEEEEHHHHHHHH HAELVQKYLMKDGVKVDEHRLTALHAALINGGAFVYVPKNVVLETPLQAVFLVDGEEANV HHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCEEEEECCCEEEECCCEEEEEEECCCCCE YNHVLFVADANSTATYVENYVANENAKGIANIVAEVIVEQGAQVKFGAVDLLAKDVTTYV EEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH NRRGVVGRDGRIDWALGLMNDGNTISENVTNLMGDGSYADTKTVTIGRGNQTQNFTTKVV HCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEE HFGKHSEGWILKHGVQKDSATSIFNGIGKIEHGASKSNAQQSSRVLMLDEKARGDASPIL EECCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCCCCCCEE LIDEDDVMAGHAASVGRVDPVQLYYLMSRGIPKREAERLVIHGFLAPVVNELPIEGVKAQ EECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH LVEVIERKVR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]