Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is yugF [H]
Identifier: 49187764
GI number: 49187764
Start: 4666125
End: 4666964
Strand: Direct
Name: yugF [H]
Synonym: BAS4774
Alternate gene names: 49187764
Gene position: 4666125-4666964 (Clockwise)
Preceding gene: 49187763
Following gene: 49187766
Centisome position: 89.24
GC content: 36.55
Gene sequence:
>840_bases ATGAATCACGAATATACTTGTCCTTATTTCACTTTTTCCACTCGCGGCACTACGATTCATTACGAATTGTATGAACATGA TAATAAAACGGAACGCCCTACTTTTGTGCTCGTTCACGGCTTTTTATCTTCCTCATTCAGTTACCGCCGTCTCATTCCTT TACTATCGAAAGAAGGAACCGTCATTGCTCTTGATTTACCACCGTTCGGAAAAAGTGATAAGTCTCATCTATTTAAGTAT TCTTATCACAATTTAGCAACGATTATAATCGATTTAATTGAACACTTATCTCTCTCAAATATTGTGTTAGTTGGACATTC TATGGGTGGACAAATTTCTCTTTATGTAAACCGTATACGTCCTGAATTAATTTCAAAGACAATTTTACTATGTAGCTCGA GTTATTTAGCACGCGCAAACTTACCTTTAATGTATTCTTCTTATTTACCGTTCTTTCATTTATACGTAAAGAACTGGATT ATACGGCGCGGCATCGTTCATAACTTAATGAATGTCGTTCATGATCATTCATTAATTGACGATGAAATGAAGGAAGGTTA CTCTGCTCCTTTTTATGACAACCGTATATTCCCCGCTTTAACTCGTATGATACGAGATCGTGAAGGTGACTTATCTTCAA CTGAATTACAAAAAATCGAAACACCTACGCTACTCATTTGGGGTGAAAAAGATCGCGTCGTTCCTGTACATGTAGGCCAT CGTCTGCACAAAGATTTACCGAATTCGAAATTTATTTCTTACGAAAACACAGGACATTTACTACCTGAAGAAAAACCGGA ACATGTTTATGAAGAAATTATCGCGTTTTCTGCGCAGTAA
Upstream 100 bases:
>100_bases AACGAAAGGCAAGATGACATCGTCATCTTGCCTTTTTTTGTTAACATATTTTCTTTTCTCTTGGAGATGATATGAACAAA AATCAATGGAGTGACAAAAA
Downstream 100 bases:
>100_bases TGTAAAAGGCTGTCGGAAATTCCGACAGCCTACAATGAACAACTTCCGCCTTCTTTTATTACGAGTAATTCCACAGCTAA CTTCTCACATTTTTCAAGCG
Product: alpha/beta fold family hydrolase
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MNHEYTCPYFTFSTRGTTIHYELYEHDNKTERPTFVLVHGFLSSSFSYRRLIPLLSKEGTVIALDLPPFGKSDKSHLFKY SYHNLATIIIDLIEHLSLSNIVLVGHSMGGQISLYVNRIRPELISKTILLCSSSYLARANLPLMYSSYLPFFHLYVKNWI IRRGIVHNLMNVVHDHSLIDDEMKEGYSAPFYDNRIFPALTRMIRDREGDLSSTELQKIETPTLLIWGEKDRVVPVHVGH RLHKDLPNSKFISYENTGHLLPEEKPEHVYEEIIAFSAQ
Sequences:
>Translated_279_residues MNHEYTCPYFTFSTRGTTIHYELYEHDNKTERPTFVLVHGFLSSSFSYRRLIPLLSKEGTVIALDLPPFGKSDKSHLFKY SYHNLATIIIDLIEHLSLSNIVLVGHSMGGQISLYVNRIRPELISKTILLCSSSYLARANLPLMYSSYLPFFHLYVKNWI IRRGIVHNLMNVVHDHSLIDDEMKEGYSAPFYDNRIFPALTRMIRDREGDLSSTELQKIETPTLLIWGEKDRVVPVHVGH RLHKDLPNSKFISYENTGHLLPEEKPEHVYEEIIAFSAQ >Mature_279_residues MNHEYTCPYFTFSTRGTTIHYELYEHDNKTERPTFVLVHGFLSSSFSYRRLIPLLSKEGTVIALDLPPFGKSDKSHLFKY SYHNLATIIIDLIEHLSLSNIVLVGHSMGGQISLYVNRIRPELISKTILLCSSSYLARANLPLMYSSYLPFFHLYVKNWI IRRGIVHNLMNVVHDHSLIDDEMKEGYSAPFYDNRIFPALTRMIRDREGDLSSTELQKIETPTLLIWGEKDRVVPVHVGH RLHKDLPNSKFISYENTGHLLPEEKPEHVYEEIIAFSAQ
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
Organism=Homo sapiens, GI218777837, Length=272, Percent_Identity=26.4705882352941, Blast_Score=75, Evalue=9e-14, Organism=Escherichia coli, GI87081721, Length=288, Percent_Identity=25.3472222222222, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 32322; Mature: 32322
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHEYTCPYFTFSTRGTTIHYELYEHDNKTERPTFVLVHGFLSSSFSYRRLIPLLSKEGT CCCCEECCEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEHHCCCCCHHHHHHHHCCCCC VIALDLPPFGKSDKSHLFKYSYHNLATIIIDLIEHLSLSNIVLVGHSMGGQISLYVNRIR EEEEECCCCCCCCHHHEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEHHC PELISKTILLCSSSYLARANLPLMYSSYLPFFHLYVKNWIIRRGIVHNLMNVVHDHSLID HHHHHHHHHHHCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEMKEGYSAPFYDNRIFPALTRMIRDREGDLSSTELQKIETPTLLIWGEKDRVVPVHVGH HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCEEEEECCH RLHKDLPNSKFISYENTGHLLPEEKPEHVYEEIIAFSAQ HHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNHEYTCPYFTFSTRGTTIHYELYEHDNKTERPTFVLVHGFLSSSFSYRRLIPLLSKEGT CCCCEECCEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEHHCCCCCHHHHHHHHCCCCC VIALDLPPFGKSDKSHLFKYSYHNLATIIIDLIEHLSLSNIVLVGHSMGGQISLYVNRIR EEEEECCCCCCCCHHHEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEHHC PELISKTILLCSSSYLARANLPLMYSSYLPFFHLYVKNWIIRRGIVHNLMNVVHDHSLID HHHHHHHHHHHCCCCCEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEMKEGYSAPFYDNRIFPALTRMIRDREGDLSSTELQKIETPTLLIWGEKDRVVPVHVGH HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCEEEEECCH RLHKDLPNSKFISYENTGHLLPEEKPEHVYEEIIAFSAQ HHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]