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The map label for this gene is yxdM [H]

Identifier: 49187720

GI number: 49187720

Start: 4611059

End: 4612339

Strand: Direct

Name: yxdM [H]

Synonym: BAS4729

Alternate gene names: 49187720

Gene position: 4611059-4612339 (Clockwise)

Preceding gene: 49187719

Following gene: 49187721

Centisome position: 88.19

GC content: 31.46

Gene sequence:

>1281_bases
ATGGTTTCAAGTATTTTCGTCATTCCAACGCTCGTTACAATCGGTACATATTTCTTTTTTTCACAAATTAGTTTCTTACT
TATTTATATTTTAAAGAAAAGAAGAAAGTTTTATATGAAACAGATTAATATGCTTTGGATTTCTGATTTAGCAAACCGTA
TTCGAACGAATATTAATATGCTTTTTATTGTAGCAATGCTATCTACTATCGCTTTCACAATGATTACGTTTCTATATGGG
TTCGGAAAGTTTATTAAGCTAGACGTTAATCGAACTTCTCCTTTCCCAATTTCTTATTTTTCTTATGATGCGAATCCTTT
TGTTACAGAGCATTTAAATTGGCTTGAGCAACAATTACAAAAAGAGCATTTTCCTTATGAGAAAATAACAGCTGATATAT
ATGAAACACCGCTAGAAGAAGATAAAGGTATAGCTATTTATAATGACGTATACGCAATTAAGCAAAGTGACTATAACAAA
CTTGCGAATTCTTTACGAATGAAACAACTATTTATGAATGATAACGAGGCATATGTTTTAACGGGGACGTCTTATATTAC
TATATTTAATGAATTTGAGCAAAGCTACAAAAGAGATTACATTACACTCTCTAGTACAAATACGAAATTAAAAGTTAAAG
GCTATGAACATATCAATGCAATTCCATCTGATTTTTCATATCAAACGATAGTTTTGCCTGATATTATCGTGAACAACTTA
CCTAACACAGTAAAGCATATATCGGCGTACAATTACAAAATTCAAAACTGGGAACAGACGTATAAAATCGCTAATACTTT
TATAGAAAAAGTGCAAAAAGATCGAAATAAATCTCAGTATGAAGGACCTCTTATTCGATCCTTTGAATCAGCAGGATCGT
TATACAGAATAACATCTGGTAGTGCTGCATACTTCCTAATCGGAACATTTTTAGGAGTTATTTTCTTCATTGGAGCTGGT
AGCGTTCTTTACTTTAGAATGTATACCGATTTGACGAACGAACAAGAGAAATATATAACGATTTCTAAAATCGGTGTAAC
AGGTGCAGAGATGAAACGATCTGCAACCATTCAACTTAGTATTTTATTTTTCGTTCCGTACATTATGGCATCCATTCATA
CAATGTTCGCAACGAAAATGCTACAAGATGTAATTGGCTTATCGTTGTTCAAAGAAGTTTCAGCCGTTCTTATTATTTTT
GGATTCGTTGAAATCGTATTTTTCTTATTCATTCGTTCACTTTATATGCAAAAGCTATCACAATATACTAATACACATTA
A

Upstream 100 bases:

>100_bases
TATTTCTTTATTTGGTGCAATTTGTTTATTTGGTGGCTATGCGTTAGCTGGAAATCCTAAATATTTCGTATCAGTAAGCC
CACAAATAGGTGTTATATAT

Downstream 100 bases:

>100_bases
AAAGGTTATTACATGAAAAAGGCGGGATCTCTTCCCTCCTTTTTCATGCTCATTATATTAGGAGGTTTAGGTGAATGACA
TTTTGGCAGTTTGCATTTAA

Product: ABC transporter permease, C-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MVSSIFVIPTLVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINMLFIVAMLSTIAFTMITFLYG
FGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQQLQKEHFPYEKITADIYETPLEEDKGIAIYNDVYAIKQSDYNK
LANSLRMKQLFMNDNEAYVLTGTSYITIFNEFEQSYKRDYITLSSTNTKLKVKGYEHINAIPSDFSYQTIVLPDIIVNNL
PNTVKHISAYNYKIQNWEQTYKIANTFIEKVQKDRNKSQYEGPLIRSFESAGSLYRITSGSAAYFLIGTFLGVIFFIGAG
SVLYFRMYTDLTNEQEKYITISKIGVTGAEMKRSATIQLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIF
GFVEIVFFLFIRSLYMQKLSQYTNTH

Sequences:

>Translated_426_residues
MVSSIFVIPTLVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINMLFIVAMLSTIAFTMITFLYG
FGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQQLQKEHFPYEKITADIYETPLEEDKGIAIYNDVYAIKQSDYNK
LANSLRMKQLFMNDNEAYVLTGTSYITIFNEFEQSYKRDYITLSSTNTKLKVKGYEHINAIPSDFSYQTIVLPDIIVNNL
PNTVKHISAYNYKIQNWEQTYKIANTFIEKVQKDRNKSQYEGPLIRSFESAGSLYRITSGSAAYFLIGTFLGVIFFIGAG
SVLYFRMYTDLTNEQEKYITISKIGVTGAEMKRSATIQLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIF
GFVEIVFFLFIRSLYMQKLSQYTNTH
>Mature_426_residues
MVSSIFVIPTLVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINMLFIVAMLSTIAFTMITFLYG
FGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQQLQKEHFPYEKITADIYETPLEEDKGIAIYNDVYAIKQSDYNK
LANSLRMKQLFMNDNEAYVLTGTSYITIFNEFEQSYKRDYITLSSTNTKLKVKGYEHINAIPSDFSYQTIVLPDIIVNNL
PNTVKHISAYNYKIQNWEQTYKIANTFIEKVQKDRNKSQYEGPLIRSFESAGSLYRITSGSAAYFLIGTFLGVIFFIGAG
SVLYFRMYTDLTNEQEKYITISKIGVTGAEMKRSATIQLSILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIF
GFVEIVFFLFIRSLYMQKLSQYTNTH

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 49530; Mature: 49530

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSIFVIPTLVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LFIVAMLSTIAFTMITFLYGFGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQQLQ
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
KEHFPYEKITADIYETPLEEDKGIAIYNDVYAIKQSDYNKLANSLRMKQLFMNDNEAYVL
HHCCCHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCEEEE
TGTSYITIFNEFEQSYKRDYITLSSTNTKLKVKGYEHINAIPSDFSYQTIVLPDIIVNNL
ECCCEEEHHHHHHHHHCCCEEEEECCCCEEEEECCHHHCCCCCCCCEEEEEEHHHHHHCC
PNTVKHISAYNYKIQNWEQTYKIANTFIEKVQKDRNKSQYEGPLIRSFESAGSLYRITSG
CHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECC
SAAYFLIGTFLGVIFFIGAGSVLYFRMYTDLTNEQEKYITISKIGVTGAEMKRSATIQLS
CHHHHHHHHHHHHHHHHCCCHHEEEEEHHHCCCCCHHEEEEEECCCCHHHHCCCCEEEEH
ILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFLFIRSLYMQKLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYTNTH
HHCCCC
>Mature Secondary Structure
MVSSIFVIPTLVTIGTYFFFSQISFLLIYILKKRRKFYMKQINMLWISDLANRIRTNINM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LFIVAMLSTIAFTMITFLYGFGKFIKLDVNRTSPFPISYFSYDANPFVTEHLNWLEQQLQ
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
KEHFPYEKITADIYETPLEEDKGIAIYNDVYAIKQSDYNKLANSLRMKQLFMNDNEAYVL
HHCCCHHHHHHHHHHCCCCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHCCCCCEEEE
TGTSYITIFNEFEQSYKRDYITLSSTNTKLKVKGYEHINAIPSDFSYQTIVLPDIIVNNL
ECCCEEEHHHHHHHHHCCCEEEEECCCCEEEEECCHHHCCCCCCCCEEEEEEHHHHHHCC
PNTVKHISAYNYKIQNWEQTYKIANTFIEKVQKDRNKSQYEGPLIRSFESAGSLYRITSG
CHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECC
SAAYFLIGTFLGVIFFIGAGSVLYFRMYTDLTNEQEKYITISKIGVTGAEMKRSATIQLS
CHHHHHHHHHHHHHHHHCCCHHEEEEEHHHCCCCCHHEEEEEECCCCHHHHCCCCEEEEH
ILFFVPYIMASIHTMFATKMLQDVIGLSLFKEVSAVLIIFGFVEIVFFLFIRSLYMQKLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYTNTH
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]