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The map label for this gene is yttP [H]

Identifier: 49187545

GI number: 49187545

Start: 4457654

End: 4457992

Strand: Reverse

Name: yttP [H]

Synonym: BAS4551

Alternate gene names: 49187545

Gene position: 4457992-4457654 (Counterclockwise)

Preceding gene: 49187547

Following gene: 49187544

Centisome position: 85.26

GC content: 37.76

Gene sequence:

>339_bases
ATGAAACAGACGAAACAAAAAGTAATTGATGCGGCAATATCGTTGTTTAACACGAAAGGTTATGATGGAACGTCGGTGCG
AGACATTGCAAAGCGAGCGGATGTGAATGTAGCGAATATTTCATATTATTTTGCTGGAAAGCAAGGTTTATTAGAGCAGC
TTATTACTGATTTTTTGGAAGGGTATATTCATGTGATTGAAACGTCGTTTGAACAGAGAGAATATTTGTCGGCTAAAGAT
GTGATGGTGCAAATGGTACGCGGGATTTTACGATATCAATTTGAAAATAGGGAACTGACACGTTTTTTTACCGAGAGCTT
TCGCTTGATACGACATTAA

Upstream 100 bases:

>100_bases
CGATGTATTTCACATGACTTTGTCGATAGAAAATTAAAGGAATTTGTCTTAAAAGTCAAGAAATTTAAACTATAGCTGTT
CAGTGAGAGGAAGTGAGCGC

Downstream 100 bases:

>100_bases
TTCGCGAAGTGATGACCGTTTATTTTTCTAAAGAAAGATATTATATAGAGCAAATGATTAGACAGGGACAAATGAAACAA
GAATTTAAAAAGGTATCTTT

Product: transcriptional regulator, N-terminus

Products: NA

Alternate protein names: Stress response protein yttP [H]

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKQTKQKVIDAAISLFNTKGYDGTSVRDIAKRADVNVANISYYFAGKQGLLEQLITDFLEGYIHVIETSFEQREYLSAKD
VMVQMVRGILRYQFENRELTRFFTESFRLIRH

Sequences:

>Translated_112_residues
MKQTKQKVIDAAISLFNTKGYDGTSVRDIAKRADVNVANISYYFAGKQGLLEQLITDFLEGYIHVIETSFEQREYLSAKD
VMVQMVRGILRYQFENRELTRFFTESFRLIRH
>Mature_112_residues
MKQTKQKVIDAAISLFNTKGYDGTSVRDIAKRADVNVANISYYFAGKQGLLEQLITDFLEGYIHVIETSFEQREYLSAKD
VMVQMVRGILRYQFENRELTRFFTESFRLIRH

Specific function: Repressor Involved In Choline Regulation Of The Bet Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 13122; Mature: 13122

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTKQKVIDAAISLFNTKGYDGTSVRDIAKRADVNVANISYYFAGKQGLLEQLITDFLE
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHEEECCCHHHHHHHHHHHHH
GYIHVIETSFEQREYLSAKDVMVQMVRGILRYQFENRELTRFFTESFRLIRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQTKQKVIDAAISLFNTKGYDGTSVRDIAKRADVNVANISYYFAGKQGLLEQLITDFLE
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHEEECCCHHHHHHHHHHHHH
GYIHVIETSFEQREYLSAKDVMVQMVRGILRYQFENRELTRFFTESFRLIRH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 11988534 [H]