Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
---|---|
Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is 49187135
Identifier: 49187135
GI number: 49187135
Start: 4057680
End: 4058378
Strand: Reverse
Name: 49187135
Synonym: BAS4138
Alternate gene names: NA
Gene position: 4058378-4057680 (Counterclockwise)
Preceding gene: 49187136
Following gene: 49187134
Centisome position: 77.62
GC content: 34.91
Gene sequence:
>699_bases ATGATATATTCATGCTATCCAATCATTATTTTTAGGGAGAATAGGGAAATGACAAACAACAATCAAATAGGTGAAAATAA GGAACAAACTATTTTTGATCATAAAGGAAATGTAATTAAGACAGAGGATAGAGAAATACAAATTATTTCAAAATTCGAAG AACCTCTTATTGTCGTGTTAGGAAATGTATTAAGTGATGAAGAGTGTGATGAATTAATTGAATTGTCTAAAAGTAAATTA GCACGTTCAAAAGTTGGTTCATCACGTGATGTAAATGATATTCGAACGAGTAGTGGTGCATTTTTGGACGATAATGAACT TACGGCGAAGATTGAAAAACGGATTTCATCTATCATGAATGTTCCTGCGTCGCATGGAGAAGGATTACACATTTTAAATT ATGAAGTGGATCAACAATATAAAGCGCATTATGATTATTTTGCGGAACATAGTAGATCCGCTGCTAATAATCGTATTAGT ACGCTTGTTATGTACTTAAATGATGTCGAAGAAGGCGGAGAAACGTTCTTTCCGAAATTAAATCTTTCTGTGCACCCTAG AAAGGGAATGGCAGTATACTTTGAGTATTTCTATCAAGACCAATCATTAAACGAGCTTACGTTACACGGAGGGGCACCTG TAACGAAAGGTGAGAAATGGATCGCAACGCAGTGGGTGAGAAGAGGTACTTATAAGTAA
Upstream 100 bases:
>100_bases TGATTTCTCATTTGAAAATAGGCTGTTTTTTAAAAGGAAATGGATAAATAAAACAATTAAAAGTTTAAATTTTCTTAAAA AAGAGAAAGGTAGAAAGAAT
Downstream 100 bases:
>100_bases AAGTGTGTATGTGACGTTTTGTTCTTCAATGCATAAGGAGAACAAAACGTTTTTTTATTAAATAAAGGAGCATCTTTCGT TATAATAACAAGTAATACAT
Product: prolyl 4-hydroxylase subunit alpha
Products: procollagen trans-4-hydroxy-L-proline; succinate; CO2
Alternate protein names: 2OG-Fe(II) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; Procollagen-Proline 2-Oxoglutarate-4-Dioxygenase; Response Regulator Receiver Domain-Containing Protein; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Subunit Alpha; 2OG-Fe(II) Oxygenase Superfamily Protein; 2OG-Fe(II) Oxygenase Family Protein; Procollagen-Proline 2-Oxoglutarate-4- Dioxygenase; Prolyl 4-Hydroxylase
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MIYSCYPIIIFRENREMTNNNQIGENKEQTIFDHKGNVIKTEDREIQIISKFEEPLIVVLGNVLSDEECDELIELSKSKL ARSKVGSSRDVNDIRTSSGAFLDDNELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRIS TLVMYLNDVEEGGETFFPKLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTYK
Sequences:
>Translated_232_residues MIYSCYPIIIFRENREMTNNNQIGENKEQTIFDHKGNVIKTEDREIQIISKFEEPLIVVLGNVLSDEECDELIELSKSKL ARSKVGSSRDVNDIRTSSGAFLDDNELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRIS TLVMYLNDVEEGGETFFPKLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTYK >Mature_232_residues MIYSCYPIIIFRENREMTNNNQIGENKEQTIFDHKGNVIKTEDREIQIISKFEEPLIVVLGNVLSDEECDELIELSKSKL ARSKVGSSRDVNDIRTSSGAFLDDNELTAKIEKRISSIMNVPASHGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRIS TLVMYLNDVEEGGETFFPKLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4758868, Length=186, Percent_Identity=32.258064516129, Blast_Score=111, Evalue=6e-25, Organism=Homo sapiens, GI217272863, Length=186, Percent_Identity=32.258064516129, Blast_Score=111, Evalue=6e-25, Organism=Homo sapiens, GI63252893, Length=184, Percent_Identity=32.6086956521739, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI63252891, Length=184, Percent_Identity=32.6086956521739, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI217272861, Length=184, Percent_Identity=32.6086956521739, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI217272849, Length=187, Percent_Identity=29.9465240641711, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI63252888, Length=187, Percent_Identity=29.9465240641711, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI63252886, Length=187, Percent_Identity=29.9465240641711, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI33589818, Length=183, Percent_Identity=31.1475409836066, Blast_Score=94, Evalue=7e-20, Organism=Homo sapiens, GI217272851, Length=182, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17541712, Length=184, Percent_Identity=29.3478260869565, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17552840, Length=189, Percent_Identity=31.7460317460317, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI193209070, Length=194, Percent_Identity=28.8659793814433, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193209068, Length=194, Percent_Identity=27.8350515463918, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI72000637, Length=197, Percent_Identity=26.3959390862944, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24651424, Length=184, Percent_Identity=33.1521739130435, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI24651477, Length=183, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI281362877, Length=226, Percent_Identity=30.5309734513274, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI116008432, Length=178, Percent_Identity=32.0224719101124, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI116008128, Length=178, Percent_Identity=32.0224719101124, Blast_Score=104, Evalue=5e-23, Organism=Drosophila melanogaster, GI116008434, Length=187, Percent_Identity=28.3422459893048, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI221460681, Length=189, Percent_Identity=31.7460317460317, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI281361323, Length=175, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI116008130, Length=181, Percent_Identity=28.1767955801105, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI116008537, Length=181, Percent_Identity=28.1767955801105, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI78706702, Length=175, Percent_Identity=29.1428571428571, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24651407, Length=184, Percent_Identity=26.6304347826087, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24651420, Length=185, Percent_Identity=28.1081081081081, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24651418, Length=185, Percent_Identity=30.2702702702703, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI24651430, Length=183, Percent_Identity=30.0546448087432, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24651416, Length=190, Percent_Identity=31.5789473684211, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI21358309, Length=182, Percent_Identity=32.4175824175824, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI21358233, Length=176, Percent_Identity=28.4090909090909, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI45550650, Length=173, Percent_Identity=25.4335260115607, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI221512818, Length=180, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24666354, Length=126, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI161076739, Length=177, Percent_Identity=23.1638418079096, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.14.11.2
Molecular weight: Translated: 26635; Mature: 26635
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYSCYPIIIFRENREMTNNNQIGENKEQTIFDHKGNVIKTEDREIQIISKFEEPLIVVL CEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCEEECCCCEEEEEHHCCCCEEEEE GNVLSDEECDELIELSKSKLARSKVGSSRDVNDIRTSSGAFLDDNELTAKIEKRISSIMN CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEECCCHHHHHHHHHHHHHHC VPASHGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKL CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEECEEE NLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTYK CEEECCCCCCEEEEEEHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MIYSCYPIIIFRENREMTNNNQIGENKEQTIFDHKGNVIKTEDREIQIISKFEEPLIVVL CEEEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCEEECCCCEEEEEHHCCCCEEEEE GNVLSDEECDELIELSKSKLARSKVGSSRDVNDIRTSSGAFLDDNELTAKIEKRISSIMN CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEECCCHHHHHHHHHHHHHHC VPASHGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKL CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEECEEE NLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTYK CEEECCCCCCEEEEEEHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: procollagen L-proline; 2-oxoglutarate; O2
Specific reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA