Click here to switch to the map view.

The map label for this gene is 49187059

Identifier: 49187059

GI number: 49187059

Start: 3992600

End: 3993034

Strand: Reverse

Name: 49187059

Synonym: BAS4061

Alternate gene names: NA

Gene position: 3993034-3992600 (Counterclockwise)

Preceding gene: 49187060

Following gene: 49187058

Centisome position: 76.37

GC content: 38.62

Gene sequence:

>435_bases
TTGATTAATTTTAACTTTTTTATGAATGATGTTGTCCGCCAAGCGCGTGAAGAGATTGTTTCTGCTGGATATACAGAATT
AACGACGCCAGAAGCAGTAGACGAAGCGTTTAAAAGAAATGGAACAACACTTGTAATGGTAAACTCTGTATGTGGTTGTG
CAGGTGGTATTGCTCGTCCTGCTGCTGCACATTCTGTACATTATGATAAACGTCCTAACCATCTTGTAACGGTGTTTGCA
GGTCAAGATAAAGAAGCAACAGCAAGAGCTCGTGAATATTTCGAAGGGTACCCACCTTCTTCTCCATCATTTGCTTTATT
AAAAGATGGAAAAATTGTAACGATGGTAGAACGTCATGAAATTGAAGGTCATGAACCGATGCAAGTTATTGCAAAACTAC
AATCGTATTTCGAAGAGAATTGCGAAGAACTATAA

Upstream 100 bases:

>100_bases
TCTAACACCTTTTCTATGCTCAAATACAAGTAAACTTACTTGTATTTCATAAACATTAACTGGTAAGATACAAATAGGTA
GTTTTAGAGGAGGGAAAAGA

Downstream 100 bases:

>100_bases
AAAATTGAAAAGGCGCTACGCTCACAATTAAGTGGGTGTAGCGCCTTTTTTATTTGTTATTCAAAATGATAGGATATACA
GTAGTCGGTTGTTTTATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MINFNFFMNDVVRQAREEIVSAGYTELTTPEAVDEAFKRNGTTLVMVNSVCGCAGGIARPAAAHSVHYDKRPNHLVTVFA
GQDKEATARAREYFEGYPPSSPSFALLKDGKIVTMVERHEIEGHEPMQVIAKLQSYFEENCEEL

Sequences:

>Translated_144_residues
MINFNFFMNDVVRQAREEIVSAGYTELTTPEAVDEAFKRNGTTLVMVNSVCGCAGGIARPAAAHSVHYDKRPNHLVTVFA
GQDKEATARAREYFEGYPPSSPSFALLKDGKIVTMVERHEIEGHEPMQVIAKLQSYFEENCEEL
>Mature_144_residues
MINFNFFMNDVVRQAREEIVSAGYTELTTPEAVDEAFKRNGTTLVMVNSVCGCAGGIARPAAAHSVHYDKRPNHLVTVFA
GQDKEATARAREYFEGYPPSSPSFALLKDGKIVTMVERHEIEGHEPMQVIAKLQSYFEENCEEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0403 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009474 [H]

Pfam domain/function: PF06491 DUF1094 [H]

EC number: NA

Molecular weight: Translated: 16071; Mature: 16071

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINFNFFMNDVVRQAREEIVSAGYTELTTPEAVDEAFKRNGTTLVMVNSVCGCAGGIARP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCHHCCCCCCCCC
AAAHSVHYDKRPNHLVTVFAGQDKEATARAREYFEGYPPSSPSFALLKDGKIVTMVERHE
HHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCC
IEGHEPMQVIAKLQSYFEENCEEL
CCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MINFNFFMNDVVRQAREEIVSAGYTELTTPEAVDEAFKRNGTTLVMVNSVCGCAGGIARP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCHHCCCCCCCCC
AAAHSVHYDKRPNHLVTVFAGQDKEATARAREYFEGYPPSSPSFALLKDGKIVTMVERHE
HHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCC
IEGHEPMQVIAKLQSYFEENCEEL
CCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA