Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is arcB
Identifier: 49187034
GI number: 49187034
Start: 3972132
End: 3973082
Strand: Reverse
Name: arcB
Synonym: BAS4036
Alternate gene names: 49187034
Gene position: 3973082-3972132 (Counterclockwise)
Preceding gene: 161611180
Following gene: 49187033
Centisome position: 75.99
GC content: 37.12
Gene sequence:
>951_bases ATGTCAACTGTACAAGTACCGAAGTTAAATACGAAAGATCTTTTAACACTAGAAGAATTAACGCAAGAAGAAATCATTTC TTTAATTGAGTTCGCTATATATTTAAAAAAGAATAAGCAGGAGCCTTTATTACAAGGAAAGATATTAGGGCTTATCTTTG ATAAACATTCAACTCGTACTCGCGTATCTTTTGAAGCAGGAATGGTACAGCTTGGGGGACATGGAATGTTTTTAAATGGA AAGGAGATGCAAATGGGAAGAGGGGAGACCGTTTCAGATACTGCAAAAGTATTGTCTCATTATATTGACGGGATCATGAT ACGCACATTCTCGCACGCGGATGTAGAAGAGCTTGCAAAAGAATCGAGCATTCCTGTTATTAATGGACTAACAGATGACC ATCATCCTTGTCAAGCATTGGCAGACTTAATGACAATATATGAAGAAACAAATACATTCAAAGGAATAAAATTGGCTTAC GTAGGTGACGGAAATAATGTATGTCATTCATTGTTGTTAGCGAGTGCGAAAGTCGGAATGCATATGACTGTTGCAACGCC TGTAGGGTATAAACCGAATGAAGAGATTGTAAAAAAAGCGTTAGCGATTGCCAAGGAAACAGGAGCTGAAATTGAGATTT TGCATAACCCTGAATTAGCGGTGAATGAAGCAGATTTCATTTATACTGACGTTTGGATGAGCATGGGGCAAGAGGGAGAA GAAGAGAAATATACTTTATTCCAACCATATCAAATTAATAAAGAACTTGTTAAGCATGCGAAACAAACATATCATTTCTT ACACTGTTTACCTGCCCATCGTGAAGAGGAAGTAACAGGCGAGATTATAGATGGACCACAGTCTATCGTTTTTGAGCAAG CTGGTAATCGATTGCATGCGCAAAAAGCATTATTAGTAAGTTTATTTAAAAATGTAGAAGAGCTTTCCTAA
Upstream 100 bases:
>100_bases GCCGCTCATTGTAACGAATGAAGAGTTAGAACAGGCAGTATATATGATAAAAAAAGTAGTTTGTACAAAAAATGTATCAA TTATATAAGGGGGAAATTTC
Downstream 100 bases:
>100_bases AGGATGTACACCCCAGTTGCTAGATACGAATAACAACTGGGGTGTATTTTTTTATATTGAAATGTCATATGTATATTTAG TTAACCATTTCGATATCATC
Product: ornithine carbamoyltransferase
Products: NA
Alternate protein names: OTCase
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSTVQVPKLNTKDLLTLEELTQEEIISLIEFAIYLKKNKQEPLLQGKILGLIFDKHSTRTRVSFEAGMVQLGGHGMFLNG KEMQMGRGETVSDTAKVLSHYIDGIMIRTFSHADVEELAKESSIPVINGLTDDHHPCQALADLMTIYEETNTFKGIKLAY VGDGNNVCHSLLLASAKVGMHMTVATPVGYKPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGE EEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTGEIIDGPQSIVFEQAGNRLHAQKALLVSLFKNVEELS
Sequences:
>Translated_316_residues MSTVQVPKLNTKDLLTLEELTQEEIISLIEFAIYLKKNKQEPLLQGKILGLIFDKHSTRTRVSFEAGMVQLGGHGMFLNG KEMQMGRGETVSDTAKVLSHYIDGIMIRTFSHADVEELAKESSIPVINGLTDDHHPCQALADLMTIYEETNTFKGIKLAY VGDGNNVCHSLLLASAKVGMHMTVATPVGYKPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGE EEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTGEIIDGPQSIVFEQAGNRLHAQKALLVSLFKNVEELS >Mature_315_residues STVQVPKLNTKDLLTLEELTQEEIISLIEFAIYLKKNKQEPLLQGKILGLIFDKHSTRTRVSFEAGMVQLGGHGMFLNGK EMQMGRGETVSDTAKVLSHYIDGIMIRTFSHADVEELAKESSIPVINGLTDDHHPCQALADLMTIYEETNTFKGIKLAYV GDGNNVCHSLLLASAKVGMHMTVATPVGYKPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGEE EKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTGEIIDGPQSIVFEQAGNRLHAQKALLVSLFKNVEELS
Specific function: Arginine biosynthesis; sixth step. [C]
COG id: COG0078
COG function: function code E; Ornithine carbamoyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATCase/OTCase family
Homologues:
Organism=Homo sapiens, GI38788445, Length=310, Percent_Identity=44.1935483870968, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI18105007, Length=306, Percent_Identity=27.4509803921569, Blast_Score=108, Evalue=5e-24, Organism=Escherichia coli, GI1790703, Length=324, Percent_Identity=37.6543209876543, Blast_Score=203, Evalue=9e-54, Organism=Escherichia coli, GI1786469, Length=327, Percent_Identity=37.0030581039755, Blast_Score=197, Evalue=6e-52, Organism=Escherichia coli, GI2367364, Length=309, Percent_Identity=31.0679611650485, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI48994908, Length=358, Percent_Identity=25.9776536312849, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193204318, Length=326, Percent_Identity=26.9938650306748, Blast_Score=87, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322373, Length=320, Percent_Identity=37.8125, Blast_Score=218, Evalue=9e-58, Organism=Saccharomyces cerevisiae, GI6322331, Length=270, Percent_Identity=31.8518518518519, Blast_Score=100, Evalue=3e-22, Organism=Drosophila melanogaster, GI24642586, Length=309, Percent_Identity=28.1553398058252, Blast_Score=100, Evalue=1e-21,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2066 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): OTC_BACAA (C3P7R4)
Other databases:
- EMBL: CP001598 - RefSeq: YP_002868429.1 - ProteinModelPortal: C3P7R4 - SMR: C3P7R4 - EnsemblBacteria: EBBACT00000130589 - GeneID: 7851442 - GenomeReviews: CP001598_GR - KEGG: bai:BAA_4372 - GeneTree: EBGT00050000002562 - ProtClustDB: PRK00779 - HAMAP: MF_01109 - InterPro: IPR006132 - InterPro: IPR006130 - InterPro: IPR006131 - InterPro: IPR002292 - PRINTS: PR00100 - PRINTS: PR00102 - TIGRFAMs: TIGR00658
Pfam domain/function: PF00185 OTCace; PF02729 OTCace_N; SSF53671 Asp/Orn_carbamoyltranf
EC number: =2.1.3.3
Molecular weight: Translated: 35306; Mature: 35175
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00097 CARBAMOYLTRANSFERASE
Important sites: BINDING 108-108 BINDING 135-135
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVQVPKLNTKDLLTLEELTQEEIISLIEFAIYLKKNKQEPLLQGKILGLIFDKHSTRT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEEECCCCCE RVSFEAGMVQLGGHGMFLNGKEMQMGRGETVSDTAKVLSHYIDGIMIRTFSHADVEELAK EEEEECCEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHH ESSIPVINGLTDDHHPCQALADLMTIYEETNTFKGIKLAYVGDGNNVCHSLLLASAKVGM HCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHCCE HMTVATPVGYKPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGE EEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCHHHHHHHHHCCCCCC EEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTGEIIDGPQSIVFEQAGNRLHA CCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHCCHHHH QKALLVSLFKNVEELS HHHHHHHHHHHHHHCC >Mature Secondary Structure STVQVPKLNTKDLLTLEELTQEEIISLIEFAIYLKKNKQEPLLQGKILGLIFDKHSTRT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCEEEEEEEECCCCCE RVSFEAGMVQLGGHGMFLNGKEMQMGRGETVSDTAKVLSHYIDGIMIRTFSHADVEELAK EEEEECCEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHH ESSIPVINGLTDDHHPCQALADLMTIYEETNTFKGIKLAYVGDGNNVCHSLLLASAKVGM HCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHCCE HMTVATPVGYKPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVWMSMGQEGE EEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCHHHHHHHHHCCCCCC EEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVTGEIIDGPQSIVFEQAGNRLHA CCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHCCHHHH QKALLVSLFKNVEELS HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA