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The map label for this gene is scpA

Identifier: 49186966

GI number: 49186966

Start: 3913222

End: 3913965

Strand: Reverse

Name: scpA

Synonym: BAS3968

Alternate gene names: 49186966

Gene position: 3913965-3913222 (Counterclockwise)

Preceding gene: 49186968

Following gene: 49186965

Centisome position: 74.86

GC content: 32.93

Gene sequence:

>744_bases
GTGCAGTATAATTTTAAAGTAGAGGCTTTTGAAGGGCCTTTAGATTTATTGTTACATTTAATACATCGTTATGAAATTGA
CATATATAATATCCCTGTAGCGGAAATTACAGAGCAATATTTATCTTATGTTCATACGATGAAAGAACTACAATTAGATG
TTGCAAGTGAGTATTTAGTAATGGCTGCAACGTTATTACAAATTAAAAGTAAAATGTTGTTGCCGAAACATGAAGAAGAT
GTACTTGATAACGGTGATGACTTTATAGATGATCCTCGTCAAGAATTGATGGAGAGGTTAATTGAATATAAGAAATATAA
GCAAGTTGCTACTGAGCTAAAAGAAAGAGAACAAGAAAGAGCACAGCTATATACACGTCCGCCAATTGATTTTACATCGT
TGCAACAAGAAGAAGAGACAAACTTGCCTCTTGATGTTACGTTATATGATATGCTAGCGGCATTTCAAAAATTAATGCGC
CGTAAAAAAGCAGAGAAACCTGTGACAACACGTATTACTCGTCAAGAAATACCAATTGAACAGCGCATGACGGATATTTT
GAAGCAGTTAGAAATACAAGGTGGTCGTCAAAGTTTTTATGATTTATTTGTTGATGATGAACGGGAAATAATGGTTGTAA
CATTTTTAGCGGTTCTTGAGCTTATGAAAAATCAACAAATCATAATTGAACAAGAACATAATTTTGATGAAATTTTCGTA
TCAAGCTATACTAAATCTGCATAG

Upstream 100 bases:

>100_bases
GCATCGGTCTATTTTTAATTAAATTTCTTAAAAAGGTTGGATAGAACATGAGTATGCTCTATACTTATGTTGTTATAGAA
AAAATGTGGTGGGATGCTTT

Downstream 100 bases:

>100_bases
AGTTAGTATAGAAAATGGGATAGAAATAGTATATCTCATGCTAGGTTTGAATGTATCGTTTGGAACAAGAGAAAAATATT
GAACCGAACGCATTGATTGT

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MQYNFKVEAFEGPLDLLLHLIHRYEIDIYNIPVAEITEQYLSYVHTMKELQLDVASEYLVMAATLLQIKSKMLLPKHEED
VLDNGDDFIDDPRQELMERLIEYKKYKQVATELKEREQERAQLYTRPPIDFTSLQQEEETNLPLDVTLYDMLAAFQKLMR
RKKAEKPVTTRITRQEIPIEQRMTDILKQLEIQGGRQSFYDLFVDDEREIMVVTFLAVLELMKNQQIIIEQEHNFDEIFV
SSYTKSA

Sequences:

>Translated_247_residues
MQYNFKVEAFEGPLDLLLHLIHRYEIDIYNIPVAEITEQYLSYVHTMKELQLDVASEYLVMAATLLQIKSKMLLPKHEED
VLDNGDDFIDDPRQELMERLIEYKKYKQVATELKEREQERAQLYTRPPIDFTSLQQEEETNLPLDVTLYDMLAAFQKLMR
RKKAEKPVTTRITRQEIPIEQRMTDILKQLEIQGGRQSFYDLFVDDEREIMVVTFLAVLELMKNQQIIIEQEHNFDEIFV
SSYTKSA
>Mature_247_residues
MQYNFKVEAFEGPLDLLLHLIHRYEIDIYNIPVAEITEQYLSYVHTMKELQLDVASEYLVMAATLLQIKSKMLLPKHEED
VLDNGDDFIDDPRQELMERLIEYKKYKQVATELKEREQERAQLYTRPPIDFTSLQQEEETNLPLDVTLYDMLAAFQKLMR
RKKAEKPVTTRITRQEIPIEQRMTDILKQLEIQGGRQSFYDLFVDDEREIMVVTFLAVLELMKNQQIIIEQEHNFDEIFV
SSYTKSA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPA_BACAA (C3P7J3)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002868358.1
- EnsemblBacteria:   EBBACT00000129854
- GeneID:   7849943
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_4300
- GeneTree:   EBGT00050000002600
- ProtClustDB:   PRK00104
- GO:   GO:0005737
- HAMAP:   MF_01805
- InterPro:   IPR003768

Pfam domain/function: PF02616 ScpA_ScpB

EC number: NA

Molecular weight: Translated: 29347; Mature: 29347

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYNFKVEAFEGPLDLLLHLIHRYEIDIYNIPVAEITEQYLSYVHTMKELQLDVASEYLV
CCCCEEEEECCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAATLLQIKSKMLLPKHEEDVLDNGDDFIDDPRQELMERLIEYKKYKQVATELKEREQER
HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLYTRPPIDFTSLQQEEETNLPLDVTLYDMLAAFQKLMRRKKAEKPVTTRITRQEIPIE
HHHHCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHH
QRMTDILKQLEIQGGRQSFYDLFVDDEREIMVVTFLAVLELMKNQQIIIEQEHNFDEIFV
HHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
SSYTKSA
HHHCCCC
>Mature Secondary Structure
MQYNFKVEAFEGPLDLLLHLIHRYEIDIYNIPVAEITEQYLSYVHTMKELQLDVASEYLV
CCCCEEEEECCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAATLLQIKSKMLLPKHEEDVLDNGDDFIDDPRQELMERLIEYKKYKQVATELKEREQER
HHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLYTRPPIDFTSLQQEEETNLPLDVTLYDMLAAFQKLMRRKKAEKPVTTRITRQEIPIE
HHHHCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHH
QRMTDILKQLEIQGGRQSFYDLFVDDEREIMVVTFLAVLELMKNQQIIIEQEHNFDEIFV
HHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
SSYTKSA
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA