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The map label for this gene is gpmB [H]

Identifier: 49184940

GI number: 49184940

Start: 1944822

End: 1945412

Strand: Direct

Name: gpmB [H]

Synonym: BAS1929

Alternate gene names: 49184940

Gene position: 1944822-1945412 (Clockwise)

Preceding gene: 49184939

Following gene: 49184941

Centisome position: 37.2

GC content: 36.72

Gene sequence:

>591_bases
ATGCAAATACTACTAATACGCCACGGAGAATCAGAAGCTGATATTTTAAACGTACATGAAGGACGAGCTGACTTTGAATT
AACAGAAAAGGGAAGACAGCAAGTGCAAAGACTTGTACAGAAAGTGAAAGCAGATTTTCCACCAGATTTCATTTGGGCAA
GTACATTAAAACGCGCTCGAGAAACTGGTGAAACGTTAGCAGAAGGAATTGGGTGCCCAATTCAATTAGAAGAGGAATTA
ATGGAGTTTAATAATGGAGTGCAAGCAGGTCTTTCATTTGAAGAAGCTAAGAAATATCCCGAGCCAAAGTTTCTTCATGA
TCGTTTTGAAAACGGGGAATCATTTATTGAATTTAGAATGAGAATAGAAGGCATCTTTTCTAAAATCGTGACGGAGAATA
CATATGACCGAATTGCAATTGTTGCACACGGTGGTGTAATAAATAGTCTATTACGTGCGTTTTTCAAAATGCCAATTTCA
ATGGACTATTATTTTAAAATGGGAGATACGGGAATAAGCTTAATTGAAATTGACGGTGAACAAAAAACGGTACATTTCAT
TAATGATACGAATCATTTGCACGGGATGTAG

Upstream 100 bases:

>100_bases
TGAAAAGAGAAATGGGATGCCATTTCTCTTTTTTATTATAGAAAATTCAGAGTATGATATAATGGAATTTTTCGGATATT
AAAAAGGGGAGTGGAGAAAC

Downstream 100 bases:

>100_bases
AGAATTATGTACAAAGTTGTATTTTTCGATGTTGACAGTACACTTTTAAGTGAGATTGATAGAAGTATGCACGAAAGTAC
AAAAGAAGCGATACGTAGGT

Product: phosphoglycerate mutase family protein

Products: NA

Alternate protein names: PGAM; Phosphoglyceromutase [H]

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MQILLIRHGESEADILNVHEGRADFELTEKGRQQVQRLVQKVKADFPPDFIWASTLKRARETGETLAEGIGCPIQLEEEL
MEFNNGVQAGLSFEEAKKYPEPKFLHDRFENGESFIEFRMRIEGIFSKIVTENTYDRIAIVAHGGVINSLLRAFFKMPIS
MDYYFKMGDTGISLIEIDGEQKTVHFINDTNHLHGM

Sequences:

>Translated_196_residues
MQILLIRHGESEADILNVHEGRADFELTEKGRQQVQRLVQKVKADFPPDFIWASTLKRARETGETLAEGIGCPIQLEEEL
MEFNNGVQAGLSFEEAKKYPEPKFLHDRFENGESFIEFRMRIEGIFSKIVTENTYDRIAIVAHGGVINSLLRAFFKMPIS
MDYYFKMGDTGISLIEIDGEQKTVHFINDTNHLHGM
>Mature_196_residues
MQILLIRHGESEADILNVHEGRADFELTEKGRQQVQRLVQKVKADFPPDFIWASTLKRARETGETLAEGIGCPIQLEEEL
MEFNNGVQAGLSFEEAKKYPEPKFLHDRFENGESFIEFRMRIEGIFSKIVTENTYDRIAIVAHGGVINSLLRAFFKMPIS
MDYYFKMGDTGISLIEIDGEQKTVHFINDTNHLHGM

Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786857, Length=196, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1790856, Length=183, Percent_Identity=26.2295081967213, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR023086 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 22467; Mature: 22467

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQILLIRHGESEADILNVHEGRADFELTEKGRQQVQRLVQKVKADFPPDFIWASTLKRAR
CEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ETGETLAEGIGCPIQLEEELMEFNNGVQAGLSFEEAKKYPEPKFLHDRFENGESFIEFRM
HHHHHHHHHCCCCEEHHHHHHHHCCCHHCCCCHHHHHCCCCCCHHHHHHCCCHHHHHHHH
RIEGIFSKIVTENTYDRIAIVAHGGVINSLLRAFFKMPISMDYYFKMGDTGISLIEIDGE
HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCC
QKTVHFINDTNHLHGM
CEEEEEECCCCCCCCC
>Mature Secondary Structure
MQILLIRHGESEADILNVHEGRADFELTEKGRQQVQRLVQKVKADFPPDFIWASTLKRAR
CEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ETGETLAEGIGCPIQLEEELMEFNNGVQAGLSFEEAKKYPEPKFLHDRFENGESFIEFRM
HHHHHHHHHCCCCEEHHHHHHHHCCCHHCCCCHHHHHCCCCCCHHHHHHCCCHHHHHHHH
RIEGIFSKIVTENTYDRIAIVAHGGVINSLLRAFFKMPISMDYYFKMGDTGISLIEIDGE
HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCC
QKTVHFINDTNHLHGM
CEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA