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The map label for this gene is ybbK [C]

Identifier: 49184939

GI number: 49184939

Start: 1943750

End: 1944715

Strand: Direct

Name: ybbK [C]

Synonym: BAS1928

Alternate gene names: 49184939

Gene position: 1943750-1944715 (Clockwise)

Preceding gene: 49184938

Following gene: 49184940

Centisome position: 37.17

GC content: 36.75

Gene sequence:

>966_bases
ATGGTAGCATTAACGTTAACGATTATTTTCGCACTAATTGTTGTTACATTTATCGCATTGACAATCAAAATTATTCCACA
GCAAAAAGTTGGAGTCGTTGAAAGATTTGGTAAGTTTCAGCGTGTGATGCAGCCAGGATTAAATTTATTAATCCCGATTG
TAGATCGCGTTCGTGTATATCATGACTTACGTATTCAGCAAACGAATGTACCACCGCAGAAAGTAATTACGAAAGATAAT
GTACAAGTAGAAATTGATACGATTATTTTCTATCAAGTCGTTGAGCCTGAACTTGCGACATATGGTATTTCGAACTATGA
ATATGGTGTTCGTAACATTACTTCAGCAACGATGCGTCAAATCATTGGTAAAATGGAACTGGATGAAACGTTATCTGGTC
GTGAAAAAATTTCAACAGAAATTCGCTTAGCGCTTGATGAAGCAACAGAAAAATGGGGCGTTCGCATTGAACGTGTTGAA
GTTGTCGATATTAATCCGCCTAAAGATGTGCAAGCGTCAATGGAAAAACAAATGAAAGCAGAACGTAATAAACGTGCGAT
CATATTAGAAGCTGAAGCTGCAAAGCAAGATAAAGTCCTTCGTGCTGAAGGGGAAAAGCAAAGTAAAATCTTAATGGCTG
AAGGGGATAAAGAAGCACGTATTCGAGAAGCGGAAGGTATTAAAGAAGCAAAAGAATTAGAAGCACAAGGGGAAGCAAGA
GCGATTGAGGAAATTGCAAAAGCAGAACAAAATCGAATTGAATTACTTCGTGAAGCAAATTTAGATGAGCGTATACTTGC
TTACAAATCATTTGAATCATTAGCTGAAGTTGCGAAAGGGCCAGCAAATAAAGTCTTTATTCCATCTAATGCAATTGAAA
CACTTGGTACTCTTGGGGCAATTGGAGAAATCTTTAAAGAAAAACAAGCGAAGAAACTGCCTTTAAATAATACAGAAAAA
GAATAA

Upstream 100 bases:

>100_bases
GGACAGCTGTTGCAGATGCTCCAATTGATACTGGAGAAAAAGTTGTTGTTATAAAGAGAAATAGTACTATATTACAAGTG
AAAAAGGAGAGTGAATAAAT

Downstream 100 bases:

>100_bases
TAAGAGTGAAAAGAGAAATGGGATGCCATTTCTCTTTTTTATTATAGAAAATTCAGAGTATGATATAATGGAATTTTTCG
GATATTAAAAAGGGGAGTGG

Product: SPFH domain-containing protein/band 7 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MVALTLTIIFALIVVTFIALTIKIIPQQKVGVVERFGKFQRVMQPGLNLLIPIVDRVRVYHDLRIQQTNVPPQKVITKDN
VQVEIDTIIFYQVVEPELATYGISNYEYGVRNITSATMRQIIGKMELDETLSGREKISTEIRLALDEATEKWGVRIERVE
VVDINPPKDVQASMEKQMKAERNKRAIILEAEAAKQDKVLRAEGEKQSKILMAEGDKEARIREAEGIKEAKELEAQGEAR
AIEEIAKAEQNRIELLREANLDERILAYKSFESLAEVAKGPANKVFIPSNAIETLGTLGAIGEIFKEKQAKKLPLNNTEK
E

Sequences:

>Translated_321_residues
MVALTLTIIFALIVVTFIALTIKIIPQQKVGVVERFGKFQRVMQPGLNLLIPIVDRVRVYHDLRIQQTNVPPQKVITKDN
VQVEIDTIIFYQVVEPELATYGISNYEYGVRNITSATMRQIIGKMELDETLSGREKISTEIRLALDEATEKWGVRIERVE
VVDINPPKDVQASMEKQMKAERNKRAIILEAEAAKQDKVLRAEGEKQSKILMAEGDKEARIREAEGIKEAKELEAQGEAR
AIEEIAKAEQNRIELLREANLDERILAYKSFESLAEVAKGPANKVFIPSNAIETLGTLGAIGEIFKEKQAKKLPLNNTEK
E
>Mature_321_residues
MVALTLTIIFALIVVTFIALTIKIIPQQKVGVVERFGKFQRVMQPGLNLLIPIVDRVRVYHDLRIQQTNVPPQKVITKDN
VQVEIDTIIFYQVVEPELATYGISNYEYGVRNITSATMRQIIGKMELDETLSGREKISTEIRLALDEATEKWGVRIERVE
VVDINPPKDVQASMEKQMKAERNKRAIILEAEAAKQDKVLRAEGEKQSKILMAEGDKEARIREAEGIKEAKELEAQGEAR
AIEEIAKAEQNRIELLREANLDERILAYKSFESLAEVAKGPANKVFIPSNAIETLGTLGAIGEIFKEKQAKKLPLNNTEK
E

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=290, Percent_Identity=35.5172413793103, Blast_Score=181, Evalue=8e-46,
Organism=Homo sapiens, GI221316744, Length=229, Percent_Identity=31.4410480349345, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI21686995, Length=229, Percent_Identity=31.4410480349345, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI38016911, Length=235, Percent_Identity=30.2127659574468, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI7657615, Length=189, Percent_Identity=28.5714285714286, Blast_Score=98, Evalue=9e-21,
Organism=Homo sapiens, GI20149563, Length=171, Percent_Identity=29.2397660818713, Blast_Score=79, Evalue=5e-15,
Organism=Escherichia coli, GI1786697, Length=312, Percent_Identity=38.7820512820513, Blast_Score=218, Evalue=5e-58,
Organism=Escherichia coli, GI1790616, Length=214, Percent_Identity=30.8411214953271, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI32564147, Length=272, Percent_Identity=37.5, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17569493, Length=194, Percent_Identity=34.5360824742268, Blast_Score=134, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI193209764, Length=194, Percent_Identity=34.5360824742268, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI25153583, Length=171, Percent_Identity=35.0877192982456, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71987612, Length=171, Percent_Identity=35.0877192982456, Blast_Score=108, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI71987621, Length=171, Percent_Identity=35.0877192982456, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71989948, Length=157, Percent_Identity=30.5732484076433, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71989955, Length=159, Percent_Identity=30.188679245283, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17569499, Length=168, Percent_Identity=30.952380952381, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17569497, Length=195, Percent_Identity=26.6666666666667, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI193210507, Length=164, Percent_Identity=34.1463414634146, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17570161, Length=164, Percent_Identity=34.1463414634146, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI32566490, Length=217, Percent_Identity=27.1889400921659, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17570459, Length=216, Percent_Identity=31.0185185185185, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71989963, Length=124, Percent_Identity=25.8064516129032, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17542664, Length=166, Percent_Identity=27.710843373494, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI45550506, Length=301, Percent_Identity=32.890365448505, Blast_Score=177, Evalue=7e-45,
Organism=Drosophila melanogaster, GI21356845, Length=202, Percent_Identity=32.1782178217822, Blast_Score=118, Evalue=6e-27,
Organism=Drosophila melanogaster, GI45556022, Length=208, Percent_Identity=33.6538461538462, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI281361633, Length=219, Percent_Identity=31.0502283105023, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI281361631, Length=219, Percent_Identity=31.0502283105023, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI18860517, Length=217, Percent_Identity=30.8755760368664, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24657857, Length=172, Percent_Identity=34.3023255813954, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI62484448, Length=172, Percent_Identity=34.3023255813954, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI281365664, Length=172, Percent_Identity=34.3023255813954, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI62484274, Length=172, Percent_Identity=34.3023255813954, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI281361635, Length=155, Percent_Identity=33.5483870967742, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI28573263, Length=233, Percent_Identity=25.7510729613734, Blast_Score=89, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 36189; Mature: 36189

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALTLTIIFALIVVTFIALTIKIIPQQKVGVVERFGKFQRVMQPGLNLLIPIVDRVRVY
CEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
HDLRIQQTNVPPQKVITKDNVQVEIDTIIFYQVVEPELATYGISNYEYGVRNITSATMRQ
HHCEEEECCCCHHHHEECCCCEEEEEEEEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHH
IIGKMELDETLSGREKISTEIRLALDEATEKWGVRIERVEVVDINPPKDVQASMEKQMKA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHH
ERNKRAIILEAEAAKQDKVLRAEGEKQSKILMAEGDKEARIREAEGIKEAKELEAQGEAR
HCCCCEEEEECCCCCCCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHH
AIEEIAKAEQNRIELLREANLDERILAYKSFESLAEVAKGPANKVFIPSNAIETLGTLGA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHH
IGEIFKEKQAKKLPLNNTEKE
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVALTLTIIFALIVVTFIALTIKIIPQQKVGVVERFGKFQRVMQPGLNLLIPIVDRVRVY
CEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
HDLRIQQTNVPPQKVITKDNVQVEIDTIIFYQVVEPELATYGISNYEYGVRNITSATMRQ
HHCEEEECCCCHHHHEECCCCEEEEEEEEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHH
IIGKMELDETLSGREKISTEIRLALDEATEKWGVRIERVEVVDINPPKDVQASMEKQMKA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHH
ERNKRAIILEAEAAKQDKVLRAEGEKQSKILMAEGDKEARIREAEGIKEAKELEAQGEAR
HCCCCEEEEECCCCCCCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHH
AIEEIAKAEQNRIELLREANLDERILAYKSFESLAEVAKGPANKVFIPSNAIETLGTLGA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHH
IGEIFKEKQAKKLPLNNTEKE
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]