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The map label for this gene is ydfK [H]

Identifier: 49184733

GI number: 49184733

Start: 1739700

End: 1740416

Strand: Direct

Name: ydfK [H]

Synonym: BAS1720

Alternate gene names: 49184733

Gene position: 1739700-1740416 (Clockwise)

Preceding gene: 49184731

Following gene: 49184734

Centisome position: 33.27

GC content: 34.31

Gene sequence:

>717_bases
ATGGTTATATTAGGAGCAGTTGTAAATGGAATTTGTATTATATTTGGTACTTTACTTGGTAAATTATTTAGTAAGATTCC
AGAAAGTATGAAGGGAACGATCATGCATGCAATTGGTTTAGCGGTTACTGTGCTTGGACTTCAAATGGCATTGAAAAGTG
AAAATTTTCTTGTTGTCATACTAAGTTTAGTAATTGGTACCGTCATCGGGGAATGGCTACAATTAGAGGGAAAGTTAAAA
CAGTTAGGAGATTGGCTAGAAAATAAAGTTGGATCGAAAGGAAAAGGGAGCATATCAGAAGGTTTTGTAACAGCTACTTT
AATTTTTGCAATTGGCGCGATGGGGATACTTGGTGCACTCGACAGTGGTATTCGTGGCAATCATGATATTTTATTTACAA
AGGCAATTATCGATGGATTTATTTCTATTATATTAACGACAACTCTAGGGATTGGCGTAGTATTTTCAGCGATTCCAGTC
ATTTTATATGAAGGTGGCATCGCAGTTTTTGCAACGCAAATTAATAATGTTGTTCCGAAAGAATTAATGAATCAATTTAT
AGTGGAAATGACAGCTACAGGCGGTATTATGATAGCCGCTATTGGATTGAACTTACTCGGATTTATTAAAATTAAAGTCG
CAAATTTACTTCCAGGTATATTAGTAGTTGGAATCATTGTTTCACTTATTTATAGTTACGGTTTAATAGTAAAGTAG

Upstream 100 bases:

>100_bases
TGTTAATATTCTTAATATTAAGTTAACATATAGATAACCTGTAAATCAATGAATAAACCAAAATATAGAAATAAAGAATT
TGAAGGGTGAAGAATGAAAA

Downstream 100 bases:

>100_bases
GGGATGGAGATACAGATGGAGGAATTTCAATTTACAAAACGTGTGCATAACATATTGAAGATTGCAGCAGAAGAGGCAGA
ATGTAATATCATTCAACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MVILGAVVNGICIIFGTLLGKLFSKIPESMKGTIMHAIGLAVTVLGLQMALKSENFLVVILSLVIGTVIGEWLQLEGKLK
QLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGALDSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPV
ILYEGGIAVFATQINNVVPKELMNQFIVEMTATGGIMIAAIGLNLLGFIKIKVANLLPGILVVGIIVSLIYSYGLIVK

Sequences:

>Translated_238_residues
MVILGAVVNGICIIFGTLLGKLFSKIPESMKGTIMHAIGLAVTVLGLQMALKSENFLVVILSLVIGTVIGEWLQLEGKLK
QLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGALDSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPV
ILYEGGIAVFATQINNVVPKELMNQFIVEMTATGGIMIAAIGLNLLGFIKIKVANLLPGILVVGIIVSLIYSYGLIVK
>Mature_238_residues
MVILGAVVNGICIIFGTLLGKLFSKIPESMKGTIMHAIGLAVTVLGLQMALKSENFLVVILSLVIGTVIGEWLQLEGKLK
QLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGALDSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPV
ILYEGGIAVFATQINNVVPKELMNQFIVEMTATGGIMIAAIGLNLLGFIKIKVANLLPGILVVGIIVSLIYSYGLIVK

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=166, Percent_Identity=24.6987951807229, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 24966; Mature: 24966

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVILGAVVNGICIIFGTLLGKLFSKIPESMKGTIMHAIGLAVTVLGLQMALKSENFLVVI
CEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LSLVIGTVIGEWLQLEGKLKQLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPVILYEGGIAVFATQINNVVPK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH
ELMNQFIVEMTATGGIMIAAIGLNLLGFIKIKVANLLPGILVVGIIVSLIYSYGLIVK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVILGAVVNGICIIFGTLLGKLFSKIPESMKGTIMHAIGLAVTVLGLQMALKSENFLVVI
CEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LSLVIGTVIGEWLQLEGKLKQLGDWLENKVGSKGKGSISEGFVTATLIFAIGAMGILGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DSGIRGNHDILFTKAIIDGFISIILTTTLGIGVVFSAIPVILYEGGIAVFATQINNVVPK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHH
ELMNQFIVEMTATGGIMIAAIGLNLLGFIKIKVANLLPGILVVGIIVSLIYSYGLIVK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]