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The map label for this gene is yebA [C]

Identifier: 49184356

GI number: 49184356

Start: 1371696

End: 1372949

Strand: Reverse

Name: yebA [C]

Synonym: BAS1339

Alternate gene names: 49184356

Gene position: 1372949-1371696 (Counterclockwise)

Preceding gene: 49184367

Following gene: 49184344

Centisome position: 26.26

GC content: 36.04

Gene sequence:

>1254_bases
ATGAAAAAGAAATTTGCAGCGTTCAGCGTTTTAGCAGCAGGAACAATTTTTGTTTCTCCATTACTATCACCCGCATACGC
TGAAACGAATCAAGATAAATTATCTAATATTCAATCTGAATTAGAAGGAAAACAAAATGACTTACAAAATAAATCAGCCG
AGAAAGAACAAATAGAAAAGGAAATTCAAGAATTACAAAAGAAAATCGACGATTTAACTACTTCTATTAATAAAAACGAG
GCTGAATTAAACGATACAAAAAAAGAAATTAGTAAAACACAACAAGTAATCGCTGAAAAAAAGAAACATATAGAGCAATT
ACAAACAAACATAGATACACGCCAGGAAGTTATTAAGCAACGTTTGCAATCTATGCAAGAAAAACCTCGCACAAATATTA
TTACAGAGGTATTAACAACTTCTACAAACATCGCTGATCTTGTTGATAATATGTACTCTGTAAGTTTAATTTTAAACAAC
GATACCGATATCGTGAAAAAACAAACAACTGACCAAAATGCTGTAACGAAAGAAAAAGAGGCGGTTGAGAAAAAAGAGCA
AGAATTAAAAGAAGCTGAACAGAAATTAGTTCACAAACAACAAGAGTTGCAAACGAATCAGCAACAGCAGCAAACCTTTA
TTAGCGATCTACATACGAAAGTAGCAAAAGTAGATTCAGAGATTGAAGGATTAGAAGAATCTAAAGGTATTTTAGAAAAT
CAGCGTCAAGCTGTTCAAAAAGCAATTGAAGAAGAAAAACGTGCAGAAGAAGCCCGTAAGGCAGAAGAAGCTCGTAAACA
AGCTACTACATCTGCTCAAAAAGCTCAAGCAGCTCCAACACCACACGATACAAATATTGGCGGCTTTATTAAACCAGCAG
CCGGATCAAAAACTTCTGGGTTTGGCGTGCGTTCTATAGATAACCATAAAGGAATCGATATCGCAGCTTCAGGAACCGTT
CCGATTATTGCCGCTGCAGATGGCGTTGTTATTCGCTCAGAATTATCTTCTAGTTATGGAAATGTTGTGTACTTATCTCA
CCGTATTAACGGAAAAACATACACAACAGTATATGCTCATATGAGTAGCCGTTCTGTATCAAATGGACAAACTGTAAAAC
AAGGAACACAACTTGGATTTATGGGGAACACTGGTCAATCATACGGACAGCATTTACACTTCGAACTTCACCTTGGAGAA
TGGAACGTCGGCAAGACAAACGCAGTTGATCCATCTCCTTATATCGGATTATAG

Upstream 100 bases:

>100_bases
CTTAGCAATTTTATAAAATTTTCTTTACATTATGGTTACAACGATAGACACTCTTCTTCTTATGATATATAACATTCATA
GGGAAAGGAGCCAGACAACC

Downstream 100 bases:

>100_bases
AAAAAACTCGGTGCATACCGAGTTTTTTATTTCCCCCGGAAAATATAGACTACAACTAACTACCTATATTTTACGGGGGA
ATCATATAAATACACAATTA

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MKKKFAAFSVLAAGTIFVSPLLSPAYAETNQDKLSNIQSELEGKQNDLQNKSAEKEQIEKEIQELQKKIDDLTTSINKNE
AELNDTKKEISKTQQVIAEKKKHIEQLQTNIDTRQEVIKQRLQSMQEKPRTNIITEVLTTSTNIADLVDNMYSVSLILNN
DTDIVKKQTTDQNAVTKEKEAVEKKEQELKEAEQKLVHKQQELQTNQQQQQTFISDLHTKVAKVDSEIEGLEESKGILEN
QRQAVQKAIEEEKRAEEARKAEEARKQATTSAQKAQAAPTPHDTNIGGFIKPAAGSKTSGFGVRSIDNHKGIDIAASGTV
PIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAHMSSRSVSNGQTVKQGTQLGFMGNTGQSYGQHLHFELHLGE
WNVGKTNAVDPSPYIGL

Sequences:

>Translated_417_residues
MKKKFAAFSVLAAGTIFVSPLLSPAYAETNQDKLSNIQSELEGKQNDLQNKSAEKEQIEKEIQELQKKIDDLTTSINKNE
AELNDTKKEISKTQQVIAEKKKHIEQLQTNIDTRQEVIKQRLQSMQEKPRTNIITEVLTTSTNIADLVDNMYSVSLILNN
DTDIVKKQTTDQNAVTKEKEAVEKKEQELKEAEQKLVHKQQELQTNQQQQQTFISDLHTKVAKVDSEIEGLEESKGILEN
QRQAVQKAIEEEKRAEEARKAEEARKQATTSAQKAQAAPTPHDTNIGGFIKPAAGSKTSGFGVRSIDNHKGIDIAASGTV
PIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAHMSSRSVSNGQTVKQGTQLGFMGNTGQSYGQHLHFELHLGE
WNVGKTNAVDPSPYIGL
>Mature_417_residues
MKKKFAAFSVLAAGTIFVSPLLSPAYAETNQDKLSNIQSELEGKQNDLQNKSAEKEQIEKEIQELQKKIDDLTTSINKNE
AELNDTKKEISKTQQVIAEKKKHIEQLQTNIDTRQEVIKQRLQSMQEKPRTNIITEVLTTSTNIADLVDNMYSVSLILNN
DTDIVKKQTTDQNAVTKEKEAVEKKEQELKEAEQKLVHKQQELQTNQQQQQTFISDLHTKVAKVDSEIEGLEESKGILEN
QRQAVQKAIEEEKRAEEARKAEEARKQATTSAQKAQAAPTPHDTNIGGFIKPAAGSKTSGFGVRSIDNHKGIDIAASGTV
PIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAHMSSRSVSNGQTVKQGTQLGFMGNTGQSYGQHLHFELHLGE
WNVGKTNAVDPSPYIGL

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=171, Percent_Identity=28.6549707602339, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87082297, Length=458, Percent_Identity=20.9606986899563, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 46211; Mature: 46211

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKFAAFSVLAAGTIFVSPLLSPAYAETNQDKLSNIQSELEGKQNDLQNKSAEKEQIEK
CCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH
EIQELQKKIDDLTTSINKNEAELNDTKKEISKTQQVIAEKKKHIEQLQTNIDTRQEVIKQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RLQSMQEKPRTNIITEVLTTSTNIADLVDNMYSVSLILNNDTDIVKKQTTDQNAVTKEKE
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCCHHHHCCCCCCHHHHHHHH
AVEKKEQELKEAEQKLVHKQQELQTNQQQQQTFISDLHTKVAKVDSEIEGLEESKGILEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQAVQKAIEEEKRAEEARKAEEARKQATTSAQKAQAAPTPHDTNIGGFIKPAAGSKTSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCC
FGVRSIDNHKGIDIAASGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAH
CCCCCCCCCCCCEEEECCCEEEEEECCCEEEHHHHHCCCCCEEEEEEECCCCEEEEEEEE
MSSRSVSNGQTVKQGTQLGFMGNTGQSYGQHLHFELHLGEWNVGKTNAVDPSPYIGL
HHCCCCCCCCHHHHCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKKFAAFSVLAAGTIFVSPLLSPAYAETNQDKLSNIQSELEGKQNDLQNKSAEKEQIEK
CCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHHH
EIQELQKKIDDLTTSINKNEAELNDTKKEISKTQQVIAEKKKHIEQLQTNIDTRQEVIKQ
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RLQSMQEKPRTNIITEVLTTSTNIADLVDNMYSVSLILNNDTDIVKKQTTDQNAVTKEKE
HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHEEEEEECCCCHHHHCCCCCCHHHHHHHH
AVEKKEQELKEAEQKLVHKQQELQTNQQQQQTFISDLHTKVAKVDSEIEGLEESKGILEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQAVQKAIEEEKRAEEARKAEEARKQATTSAQKAQAAPTPHDTNIGGFIKPAAGSKTSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCC
FGVRSIDNHKGIDIAASGTVPIIAAADGVVIRSELSSSYGNVVYLSHRINGKTYTTVYAH
CCCCCCCCCCCCEEEECCCEEEEEECCCEEEHHHHHCCCCCEEEEEEECCCCEEEEEEEE
MSSRSVSNGQTVKQGTQLGFMGNTGQSYGQHLHFELHLGEWNVGKTNAVDPSPYIGL
HHCCCCCCCCHHHHCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]