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The map label for this gene is ycdQ [C]

Identifier: 49183508

GI number: 49183508

Start: 501748

End: 503304

Strand: Direct

Name: ycdQ [C]

Synonym: BAS0480

Alternate gene names: 49183508

Gene position: 501748-503304 (Clockwise)

Preceding gene: 49183507

Following gene: 49183509

Centisome position: 9.6

GC content: 36.93

Gene sequence:

>1557_bases
GTGAAGAAGACAATGGCTAAGTCATTATCTGTTATTATTCCTGCATGGAATGAAATCGATACGATTTCAGACGTTATTCA
ATCGGTAAAAGGATTAAATCCATTAGAGATTATTGTAGTAGCAAATGGTTGTACTGATGGTACAGAAACAGTTGCTGAGC
ATTTAGGATGTAAAGTACTGCGGTATACAGAAAAGCTTGGAAATGATGTTGGACGTGCAGCTGGTGCCAAAGAATCTATA
GGTGATGTACTACTATTTATAGATGGCGATTTTGCTATTCAAACTTCAAAATTACAGTTATTTCTTAATCCGATTTTATA
CAATCAGGCAGATGTAGTTTTAAATAATTTGGACGCATTATTTTTAAAAAGGCAAAAACCTAATTCTATTACAGTATGGC
GCCAAATATTAAATTCAATATTAGAGCGTGAAGAGTTAAAAATTGATTCTTTATTAGCTGTACCTCATGCGTTGACGAAA
GAAGTTGTTCAAAGTATTGGATATGAATGTTTTGTTAATCCTATTCTCGCTCATTTACGTCTAGTTCAAGGCAAATGGAG
AATTAGTCGACATTGTGCAATTGACGTTATTACGCCAAATAAATTTCGGCCGACAGAGCATGCTGCGTATGGCACAGATC
TTTCTCCTTCTGAAAAACGGATGATAGGTGACCATATAGAAGCTGTAGCAGAGCGAATAGTAGGTAGCGATGAGCGCGGA
GGGTATTGTGATGGAAATAGGAAAAGAGATAGTGTCTATCATACTTTAGATTTTGAAGATTTTTATCAAGGATGGGGCGT
TACATCTAATTTGTATAAGGGAAAGCAATTATCGGTCATTATTCCTGTACAAGATGAAGAGAAAACAATTGGAAACGTTA
TAGAAGAGCTTCGCAAGATTGAACCTTTTGAAATTATCGTTGTTGTAAATGGTTCGTCCGATCAAACGGCGACAATTGCA
AAAGACAAGGGAGCAACGACAATTGTATATAAAGAAGCACTTGGAAATGATGTGGGGCGCTCACTTGGAACGTATTTTGC
AAAAGGAGAAATTGTGTTATTTATAGACGGCGATTTTGTTATTCCAGCGAGCGAGCTATATCCTTTTGCGAAAGCCATTG
CAGATGGGACAGATGTTGCATTAAATGATCTAAATCATTATTTGGATTTAAGAGTACCGCTTCATCTTGTAACTGCATTT
AAATATGCATTAAATTTAGCTTGTGATAGAAAAGATCTAGGCGTAGGCTCACTTATCGCTGTACCGAATGCGTTTAGCCG
TAAGTGTTTGAAACAAATTGGGTATAGATCTTTATTGGCGCCGTGTGTAGCCCAAGTGAAAGCTATTCTTTCAGGATTTG
AAGTTGCATGTGTAAGTCGTGTTGAGGTCGATAAGATGAACCGTATTCGTCCCAGTGAACATTTTGCTAAAATAGGTCAT
CCACCAGCTGTACTTCGAATTATAGGTGACCATATAGAAGGATTAGAGCAATTAATTGGATTAACAGGCAGTCGTGGTGG
ATTCCATGATGGAAATAGAAAAAGAGATATTTTATAG

Upstream 100 bases:

>100_bases
CCAAATAGAAGACCAGACGTAACAAAATTAAAAGATCTTGTTCAATTTCAGGCGAAAGTAACGTGGGAAGACGGATTGAA
GGAAACAATTAAGTGGTTTC

Downstream 100 bases:

>100_bases
GTAACAAAAAAGTGTACAACATATGTACACTTTTTTGTTCTGTTATAAAAACTATAACAGATTAGGAGATAAGAGTATTA
CAGCTCTACAATGGGTATTG

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Cell Wall Biosynthesis Glycosyltransferase; Glycosyltransferase/Glycosyltransferase; Glycosyltransferase; Dolichyl-Phosphate Mannoosyltransferase Related Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Family 2 Glycosyl Transferase; Glycosyl Transferase; Glycosyl Transferase Domain-Containing Protein

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MKKTMAKSLSVIIPAWNEIDTISDVIQSVKGLNPLEIIVVANGCTDGTETVAEHLGCKVLRYTEKLGNDVGRAAGAKESI
GDVLLFIDGDFAIQTSKLQLFLNPILYNQADVVLNNLDALFLKRQKPNSITVWRQILNSILEREELKIDSLLAVPHALTK
EVVQSIGYECFVNPILAHLRLVQGKWRISRHCAIDVITPNKFRPTEHAAYGTDLSPSEKRMIGDHIEAVAERIVGSDERG
GYCDGNRKRDSVYHTLDFEDFYQGWGVTSNLYKGKQLSVIIPVQDEEKTIGNVIEELRKIEPFEIIVVVNGSSDQTATIA
KDKGATTIVYKEALGNDVGRSLGTYFAKGEIVLFIDGDFVIPASELYPFAKAIADGTDVALNDLNHYLDLRVPLHLVTAF
KYALNLACDRKDLGVGSLIAVPNAFSRKCLKQIGYRSLLAPCVAQVKAILSGFEVACVSRVEVDKMNRIRPSEHFAKIGH
PPAVLRIIGDHIEGLEQLIGLTGSRGGFHDGNRKRDIL

Sequences:

>Translated_518_residues
MKKTMAKSLSVIIPAWNEIDTISDVIQSVKGLNPLEIIVVANGCTDGTETVAEHLGCKVLRYTEKLGNDVGRAAGAKESI
GDVLLFIDGDFAIQTSKLQLFLNPILYNQADVVLNNLDALFLKRQKPNSITVWRQILNSILEREELKIDSLLAVPHALTK
EVVQSIGYECFVNPILAHLRLVQGKWRISRHCAIDVITPNKFRPTEHAAYGTDLSPSEKRMIGDHIEAVAERIVGSDERG
GYCDGNRKRDSVYHTLDFEDFYQGWGVTSNLYKGKQLSVIIPVQDEEKTIGNVIEELRKIEPFEIIVVVNGSSDQTATIA
KDKGATTIVYKEALGNDVGRSLGTYFAKGEIVLFIDGDFVIPASELYPFAKAIADGTDVALNDLNHYLDLRVPLHLVTAF
KYALNLACDRKDLGVGSLIAVPNAFSRKCLKQIGYRSLLAPCVAQVKAILSGFEVACVSRVEVDKMNRIRPSEHFAKIGH
PPAVLRIIGDHIEGLEQLIGLTGSRGGFHDGNRKRDIL
>Mature_518_residues
MKKTMAKSLSVIIPAWNEIDTISDVIQSVKGLNPLEIIVVANGCTDGTETVAEHLGCKVLRYTEKLGNDVGRAAGAKESI
GDVLLFIDGDFAIQTSKLQLFLNPILYNQADVVLNNLDALFLKRQKPNSITVWRQILNSILEREELKIDSLLAVPHALTK
EVVQSIGYECFVNPILAHLRLVQGKWRISRHCAIDVITPNKFRPTEHAAYGTDLSPSEKRMIGDHIEAVAERIVGSDERG
GYCDGNRKRDSVYHTLDFEDFYQGWGVTSNLYKGKQLSVIIPVQDEEKTIGNVIEELRKIEPFEIIVVVNGSSDQTATIA
KDKGATTIVYKEALGNDVGRSLGTYFAKGEIVLFIDGDFVIPASELYPFAKAIADGTDVALNDLNHYLDLRVPLHLVTAF
KYALNLACDRKDLGVGSLIAVPNAFSRKCLKQIGYRSLLAPCVAQVKAILSGFEVACVSRVEVDKMNRIRPSEHFAKIGH
PPAVLRIIGDHIEGLEQLIGLTGSRGGFHDGNRKRDIL

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57126; Mature: 57126

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTMAKSLSVIIPAWNEIDTISDVIQSVKGLNPLEIIVVANGCTDGTETVAEHLGCKVL
CCCHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCHHH
RYTEKLGNDVGRAAGAKESIGDVLLFIDGDFAIQTSKLQLFLNPILYNQADVVLNNLDAL
HHHHHHCHHHHHHCCCCCCCCCEEEEEECCEEEEHHHHHEEEHHHHHCCHHHHHHCCHHH
FLKRQKPNSITVWRQILNSILEREELKIDSLLAVPHALTKEVVQSIGYECFVNPILAHLR
HEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LVQGKWRISRHCAIDVITPNKFRPTEHAAYGTDLSPSEKRMIGDHIEAVAERIVGSDERG
HHCCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
GYCDGNRKRDSVYHTLDFEDFYQGWGVTSNLYKGKQLSVIIPVQDEEKTIGNVIEELRKI
CCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCC
EPFEIIVVVNGSSDQTATIAKDKGATTIVYKEALGNDVGRSLGTYFAKGEIVLFIDGDFV
CCEEEEEEEECCCCCEEEEECCCCCEEEEEHHHHCCHHHHHHHHHEECCCEEEEECCCEE
IPASELYPFAKAIADGTDVALNDLNHYLDLRVPLHLVTAFKYALNLACDRKDLGVGSLIA
CCHHHHHHHHHHHCCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
VPNAFSRKCLKQIGYRSLLAPCVAQVKAILSGFEVACVSRVEVDKMNRIRPSEHFAKIGH
CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC
PPAVLRIIGDHIEGLEQLIGLTGSRGGFHDGNRKRDIL
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKTMAKSLSVIIPAWNEIDTISDVIQSVKGLNPLEIIVVANGCTDGTETVAEHLGCKVL
CCCHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCHHH
RYTEKLGNDVGRAAGAKESIGDVLLFIDGDFAIQTSKLQLFLNPILYNQADVVLNNLDAL
HHHHHHCHHHHHHCCCCCCCCCEEEEEECCEEEEHHHHHEEEHHHHHCCHHHHHHCCHHH
FLKRQKPNSITVWRQILNSILEREELKIDSLLAVPHALTKEVVQSIGYECFVNPILAHLR
HEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LVQGKWRISRHCAIDVITPNKFRPTEHAAYGTDLSPSEKRMIGDHIEAVAERIVGSDERG
HHCCCCEEECCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
GYCDGNRKRDSVYHTLDFEDFYQGWGVTSNLYKGKQLSVIIPVQDEEKTIGNVIEELRKI
CCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCC
EPFEIIVVVNGSSDQTATIAKDKGATTIVYKEALGNDVGRSLGTYFAKGEIVLFIDGDFV
CCEEEEEEEECCCCCEEEEECCCCCEEEEEHHHHCCHHHHHHHHHEECCCEEEEECCCEE
IPASELYPFAKAIADGTDVALNDLNHYLDLRVPLHLVTAFKYALNLACDRKDLGVGSLIA
CCHHHHHHHHHHHCCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
VPNAFSRKCLKQIGYRSLLAPCVAQVKAILSGFEVACVSRVEVDKMNRIRPSEHFAKIGH
CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC
PPAVLRIIGDHIEGLEQLIGLTGSRGGFHDGNRKRDIL
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA