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The map label for this gene is yfjP [H]

Identifier: 49183441

GI number: 49183441

Start: 445338

End: 445979

Strand: Direct

Name: yfjP [H]

Synonym: BAS0413

Alternate gene names: 49183441

Gene position: 445338-445979 (Clockwise)

Preceding gene: 49183440

Following gene: 49183442

Centisome position: 8.52

GC content: 35.05

Gene sequence:

>642_bases
ATGAAACGAATGGGGGCCATTTTTCATTGGAATGAACCGTTTCAAGATATACAAAATCATTTTTTAAACACATCATTACG
TCCACTATTTGAAACATATGCTTATACTCCAATTATTTTAGAATTTGATTATTTTGCTTGTCTTCTTCGCTGTATCATTC
ATCAACAAATAAATTTGAAATTTGCTACTGTGTTAACAGAACAGTTTGTGAAACGATATGGAACAGAGAAGAACGGTGTA
TTCTTTTTCCCCACTCCAGAAATAGTAGCAAATATTTCAATAGAGGAATTGAGAGAGCAGAAGTTTAGTCAGCGAAAAGC
TGAATATATAGTAGGATTAGGTCAAAGTATTGCCAGCGGTACATTAAATTTAGCGAGTATAGAAACCAGAGCGGAAGAAG
AGGTTTCAGCACGATTGTTACCAATTAGGGGAATTGGTACATGGACAGTGCAAAATTTTTTAATGTTTGGGCTTGGACGG
AAAAATATGTTTCCGAAAGCGGACATTGGGATTCAGCGTGCAGTACAAGGTGTATTTCAATTAGATGATAAACCTGATGA
TGCATTTTTAGAAAAAGTGAAACAAGAGTGTGAACCATACTGCAGTTATGCAGCGTTATATTTATGGAAAAGTATAGAGT
AG

Upstream 100 bases:

>100_bases
TATAGACGAGGAACAGATTGTTGTTCGCCTGCAAGGGATTGGTACTGTTCAAAATCCACAGTTTTGAATTTCTAGTCAGA
CAGGAGATCCAGAGAAAGTT

Downstream 100 bases:

>100_bases
AGGTGTAATAATGATACAAAAGCAACATGAGAGTAAGTTGGAAGTTGGTCAAACATTTCCTGTGACAATTAAACGTCTTG
GGATTAACGGAGAAGGCGTT

Product: DNA-3-methyladenine glycosylase II, C-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKRMGAIFHWNEPFQDIQNHFLNTSLRPLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGV
FFFPTPEIVANISIEELREQKFSQRKAEYIVGLGQSIASGTLNLASIETRAEEEVSARLLPIRGIGTWTVQNFLMFGLGR
KNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALYLWKSIE

Sequences:

>Translated_213_residues
MKRMGAIFHWNEPFQDIQNHFLNTSLRPLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGV
FFFPTPEIVANISIEELREQKFSQRKAEYIVGLGQSIASGTLNLASIETRAEEEVSARLLPIRGIGTWTVQNFLMFGLGR
KNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALYLWKSIE
>Mature_213_residues
MKRMGAIFHWNEPFQDIQNHFLNTSLRPLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGV
FFFPTPEIVANISIEELREQKFSQRKAEYIVGLGQSIASGTLNLASIETRAEEEVSARLLPIRGIGTWTVQNFLMFGLGR
KNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALYLWKSIE

Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine, 3-methylguanine, 7-methylguanine, O2- methylthymine, and O2-methylcytosine from the damaged DNA polymer formed by alkylation lesions [H]

COG id: COG0122

COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alkylbase DNA glycosidase alkA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: =3.2.2.21 [H]

Molecular weight: Translated: 24624; Mature: 24624

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMGAIFHWNEPFQDIQNHFLNTSLRPLFETYAYTPIILEFDYFACLLRCIIHQQINLK
CCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCHH
FATVLTEQFVKRYGTEKNGVFFFPTPEIVANISIEELREQKFSQRKAEYIVGLGQSIASG
HHHHHHHHHHHHHCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHC
TLNLASIETRAEEEVSARLLPIRGIGTWTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQ
CCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LDDKPDDAFLEKVKQECEPYCSYAALYLWKSIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRMGAIFHWNEPFQDIQNHFLNTSLRPLFETYAYTPIILEFDYFACLLRCIIHQQINLK
CCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCHH
FATVLTEQFVKRYGTEKNGVFFFPTPEIVANISIEELREQKFSQRKAEYIVGLGQSIASG
HHHHHHHHHHHHHCCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHC
TLNLASIETRAEEEVSARLLPIRGIGTWTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQ
CCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LDDKPDDAFLEKVKQECEPYCSYAALYLWKSIE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]