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The map label for this gene is tsr [C]

Identifier: 49183393

GI number: 49183393

Start: 397531

End: 399270

Strand: Direct

Name: tsr [C]

Synonym: BAS0365

Alternate gene names: 49183393

Gene position: 397531-399270 (Clockwise)

Preceding gene: 49183391

Following gene: 49183394

Centisome position: 7.6

GC content: 33.97

Gene sequence:

>1740_bases
ATGAAAAAATATTGGCACAAGCTATCATTTCTTCAAAAGAATGTATTGTTAACTGTGTTAGTTATTTTGACGCTTGTTGG
TACTATGGGAGCGTTAAGTTTTAACATGTTTCAAAATAGCATGATGTCTATATTTGAAAGGCATTCTTTTGAAACAGGAG
ATACGGTATTACATAAATTAGACGAAGAAATAGTGAGAGATGTTACAAAAGACCCAGTGGCACAAAGAGAAAAGAGAGAG
AAGTTAACAGAGAAATTAGATGAAGCAACGGAAGAATTGAATAGTGTTGGACAAACGTATATTGTTGGAGCAAAAAAAAA
TGAAAAAGGTGAGTTACTAATCGTCGACTTGTCTACAGACTTAGCAAATGTTGTTGAAGTAAGGCCGGGAGAATATTATA
AACAACTAGATCTTTGGATGGAAGCATACGATAAGGTAATGAGCACGAAAAAAGCAAACATGACAGTAGTATATGAAGAT
CTATTAGGAACATGGGTAACGATATTAGAGCCAATTAAAGATGGAGAAGGAAATATTGTGGCAATTGTTGCAGCCGATGT
AGATGCCTCTATTGTTCCTAGTACAAAGGAAAAGTTCATTATACAAGGTTTAATGTTTATTTGTATTTCTGTTTTAATTG
CAACTGTTATTCAATTCTTAATTGTACGTAATGCACTTGCTCCATTGCGAGATTTACGTGAAGGATTGCGCAGAGTTGGT
GAAGGTGATTTAAATATTAAATTAGAGGAAAGATCAGATGATATTGGTATTATTAATTCTTATTTTAATAATACCATCGA
GAAGTTTAAAGGAATTATAGATAAAGTGAAGCAGACAGCAGAACAGGTTTCCTCATCTTCACAAGAATTGTCAGTGAGTA
CGAAAGAGAATAGTATGGCAGTTCAAGAAATCGTAAGTTCTATGGTTGAGTTAAGAGCTGGCGCTCAGTTACAAGAAACT
TCAGTACCACAGTATTTAGGTATTGTATATGAAGTGGAAGATAAGATGGAAGAGATAACGAATGCGGCAAAACAAATGGA
GAAAGTGTCTGAAGGTATAGAGCATCATTCAGTTAAAGGAAACGGTGTTACTAAACAGGCAATTAATCAAATGAATATAA
TACAAAATGCAGTACAAGATTTATCTTCTATCATTTATTCTTTGGAAGTAAGATCAAAAGAAATTAGTGATATTGTAACT
GTAATTACAAGTATTTCAAATCAAACTAATTCGCTAGCTTTACACGCTACTATTGAAGCTTCACGTGCTGAGGAAACTGG
AGAGGGATTTGCCGTTGTTGCTGATGAAGTGCGTAAATTAGCAGAGCAGATGGAAGCATCAGCAAAAGATATAGCAAATT
TAATAAGGGAAACACAAGCTGGTACGGAAGAAGCTGTTGTTTCAATACGAAAAGCTTCAAAAGAAGTAGAATCTGGGATG
AAACTTGTTGAAATGAATGGTGCTTTCTTTGAGGAAATTTCAAAATCAGCACAATCTGTTACAAATCAAGTTAGAGTTGT
TTCTAGCAATTCAAGTGATATATTGCAAAATAGCCAAAATATTGTTCGTGTTGTAAATGAACTATCACTTATCGCAAATA
CGTATACAAATAGTAGTAGTAATGTTGAAGAAAGTATGAAAGAACAGGAAATGTCTGTACAAGATATTGCTGAATTAGCC
AGTTCTTTAAGCTGGCTTTCACAGGAGTTACAAGAGTTAATTGGGGAGTTCAAAAGTTAA

Upstream 100 bases:

>100_bases
TTTTTATTTGCAAACAAATGAGAAACCTTATCAGTTGTTGATAAGGTTTCTATTTTAATAGTTTTCCTTTATATTAAGTT
AATTAAGAAAGGTGATGTTG

Downstream 100 bases:

>100_bases
ATGAAATGATTATACATGCTTTTGTTTGTTCAATAAAATAAATCATGCTACAATGAAAACGAATTAAGGACCGGGGAGCC
AATTGGCTGAGAGGATGTGA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MKKYWHKLSFLQKNVLLTVLVILTLVGTMGALSFNMFQNSMMSIFERHSFETGDTVLHKLDEEIVRDVTKDPVAQREKRE
KLTEKLDEATEELNSVGQTYIVGAKKNEKGELLIVDLSTDLANVVEVRPGEYYKQLDLWMEAYDKVMSTKKANMTVVYED
LLGTWVTILEPIKDGEGNIVAIVAADVDASIVPSTKEKFIIQGLMFICISVLIATVIQFLIVRNALAPLRDLREGLRRVG
EGDLNIKLEERSDDIGIINSYFNNTIEKFKGIIDKVKQTAEQVSSSSQELSVSTKENSMAVQEIVSSMVELRAGAQLQET
SVPQYLGIVYEVEDKMEEITNAAKQMEKVSEGIEHHSVKGNGVTKQAINQMNIIQNAVQDLSSIIYSLEVRSKEISDIVT
VITSISNQTNSLALHATIEASRAEETGEGFAVVADEVRKLAEQMEASAKDIANLIRETQAGTEEAVVSIRKASKEVESGM
KLVEMNGAFFEEISKSAQSVTNQVRVVSSNSSDILQNSQNIVRVVNELSLIANTYTNSSSNVEESMKEQEMSVQDIAELA
SSLSWLSQELQELIGEFKS

Sequences:

>Translated_579_residues
MKKYWHKLSFLQKNVLLTVLVILTLVGTMGALSFNMFQNSMMSIFERHSFETGDTVLHKLDEEIVRDVTKDPVAQREKRE
KLTEKLDEATEELNSVGQTYIVGAKKNEKGELLIVDLSTDLANVVEVRPGEYYKQLDLWMEAYDKVMSTKKANMTVVYED
LLGTWVTILEPIKDGEGNIVAIVAADVDASIVPSTKEKFIIQGLMFICISVLIATVIQFLIVRNALAPLRDLREGLRRVG
EGDLNIKLEERSDDIGIINSYFNNTIEKFKGIIDKVKQTAEQVSSSSQELSVSTKENSMAVQEIVSSMVELRAGAQLQET
SVPQYLGIVYEVEDKMEEITNAAKQMEKVSEGIEHHSVKGNGVTKQAINQMNIIQNAVQDLSSIIYSLEVRSKEISDIVT
VITSISNQTNSLALHATIEASRAEETGEGFAVVADEVRKLAEQMEASAKDIANLIRETQAGTEEAVVSIRKASKEVESGM
KLVEMNGAFFEEISKSAQSVTNQVRVVSSNSSDILQNSQNIVRVVNELSLIANTYTNSSSNVEESMKEQEMSVQDIAELA
SSLSWLSQELQELIGEFKS
>Mature_579_residues
MKKYWHKLSFLQKNVLLTVLVILTLVGTMGALSFNMFQNSMMSIFERHSFETGDTVLHKLDEEIVRDVTKDPVAQREKRE
KLTEKLDEATEELNSVGQTYIVGAKKNEKGELLIVDLSTDLANVVEVRPGEYYKQLDLWMEAYDKVMSTKKANMTVVYED
LLGTWVTILEPIKDGEGNIVAIVAADVDASIVPSTKEKFIIQGLMFICISVLIATVIQFLIVRNALAPLRDLREGLRRVG
EGDLNIKLEERSDDIGIINSYFNNTIEKFKGIIDKVKQTAEQVSSSSQELSVSTKENSMAVQEIVSSMVELRAGAQLQET
SVPQYLGIVYEVEDKMEEITNAAKQMEKVSEGIEHHSVKGNGVTKQAINQMNIIQNAVQDLSSIIYSLEVRSKEISDIVT
VITSISNQTNSLALHATIEASRAEETGEGFAVVADEVRKLAEQMEASAKDIANLIRETQAGTEEAVVSIRKASKEVESGM
KLVEMNGAFFEEISKSAQSVTNQVRVVSSNSSDILQNSQNIVRVVNELSLIANTYTNSSSNVEESMKEQEMSVQDIAELA
SSLSWLSQELQELIGEFKS

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=333, Percent_Identity=27.9279279279279, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787690, Length=261, Percent_Identity=29.8850574712644, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789453, Length=333, Percent_Identity=24.3243243243243, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1788195, Length=318, Percent_Identity=25.1572327044025, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788194, Length=147, Percent_Identity=34.0136054421769, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 64288; Mature: 64288

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYWHKLSFLQKNVLLTVLVILTLVGTMGALSFNMFQNSMMSIFERHSFETGDTVLHKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DEEIVRDVTKDPVAQREKREKLTEKLDEATEELNSVGQTYIVGAKKNEKGELLIVDLSTD
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCC
LANVVEVRPGEYYKQLDLWMEAYDKVMSTKKANMTVVYEDLLGTWVTILEPIKDGEGNIV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHHHCCCCCEE
AIVAADVDASIVPSTKEKFIIQGLMFICISVLIATVIQFLIVRNALAPLRDLREGLRRVG
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EGDLNIKLEERSDDIGIINSYFNNTIEKFKGIIDKVKQTAEQVSSSSQELSVSTKENSMA
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCHHHHH
VQEIVSSMVELRAGAQLQETSVPQYLGIVYEVEDKMEEITNAAKQMEKVSEGIEHHSVKG
HHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NGVTKQAINQMNIIQNAVQDLSSIIYSLEVRSKEISDIVTVITSISNQTNSLALHATIEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEH
SRAEETGEGFAVVADEVRKLAEQMEASAKDIANLIRETQAGTEEAVVSIRKASKEVESGM
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
KLVEMNGAFFEEISKSAQSVTNQVRVVSSNSSDILQNSQNIVRVVNELSLIANTYTNSSS
EEEECCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NVEESMKEQEMSVQDIAELASSLSWLSQELQELIGEFKS
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKYWHKLSFLQKNVLLTVLVILTLVGTMGALSFNMFQNSMMSIFERHSFETGDTVLHKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DEEIVRDVTKDPVAQREKREKLTEKLDEATEELNSVGQTYIVGAKKNEKGELLIVDLSTD
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCC
LANVVEVRPGEYYKQLDLWMEAYDKVMSTKKANMTVVYEDLLGTWVTILEPIKDGEGNIV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHHHCCCCCEE
AIVAADVDASIVPSTKEKFIIQGLMFICISVLIATVIQFLIVRNALAPLRDLREGLRRVG
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EGDLNIKLEERSDDIGIINSYFNNTIEKFKGIIDKVKQTAEQVSSSSQELSVSTKENSMA
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCHHHHH
VQEIVSSMVELRAGAQLQETSVPQYLGIVYEVEDKMEEITNAAKQMEKVSEGIEHHSVKG
HHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NGVTKQAINQMNIIQNAVQDLSSIIYSLEVRSKEISDIVTVITSISNQTNSLALHATIEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEH
SRAEETGEGFAVVADEVRKLAEQMEASAKDIANLIRETQAGTEEAVVSIRKASKEVESGM
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
KLVEMNGAFFEEISKSAQSVTNQVRVVSSNSSDILQNSQNIVRVVNELSLIANTYTNSSS
EEEECCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NVEESMKEQEMSVQDIAELASSLSWLSQELQELIGEFKS
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA