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The map label for this gene is rex

Identifier: 49183281

GI number: 49183281

Start: 256559

End: 257188

Strand: Direct

Name: rex

Synonym: BAS0249

Alternate gene names: 49183281

Gene position: 256559-257188 (Clockwise)

Preceding gene: 161611186

Following gene: 49183284

Centisome position: 4.91

GC content: 35.4

Gene sequence:

>630_bases
ATGGAGCAGCAGAAAATTCCACAAGCCACTGCTAAGAGATTGCCTCTATACTATCGATTTATCCAAAACTTATCTTTGTC
TGGTAAGCAACGTGTTTCATCAGCCGAATTAAGTGAAGCGGTAAAGGTTGATTCCGCAACGATTCGAAGAGATTTCTCAT
ACTTTGGAGCATTAGGGAAAAAAGGATATGGATATAACGTAAATTATTTATTATCATTTTTCCGTGAAACACTCGACCAA
GATGATATAACACGTGTAGCGCTTATTGGAGTAGGTAATTTAGGGACCGCTTTCTTACATTATAATTTCACGAAAAACAA
TAATACAAAAATTGAAATGGCGTTTGATGTTAGTGAAGAGAAAGTTGGAACAGAAATCGGAGGCATCCCTGTATATCACT
TAGATGAATTAGAAGAACGTTTATCATCTGATATACAAGTGGCAATATTAACAGTACCCGCTACAGTAGCACAATCTGTA
GCTGATAGATTGGCAGAAACAAACGTGCATGGTATTTTGAATTTCACACCAGCACGATTAAATGTGTCAGACAATATAAG
AATTCATCATATTGATTTAGCAGTAGAGTTACAAACACTAGTTTACTTTTTGAAGAATTATCCACAATAA

Upstream 100 bases:

>100_bases
GAATACTTCTTCTTTCTATTATACAAGGAATTTAATAAGTGCTAAACTTCTGTATTTGATTAAAGCATATGAATAAAGAT
AGGAAGAGAGGAGAGGTTAT

Downstream 100 bases:

>100_bases
AACGCAGAGGAAGCGACCTCTGCGTTTTATTATTGTTTTTTCTTTGTGAATTTAACTAAGATGAGGCGAAGTGCCAAATT
AAAATCAATCGTTGCCATAA

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MEQQKIPQATAKRLPLYYRFIQNLSLSGKQRVSSAELSEAVKVDSATIRRDFSYFGALGKKGYGYNVNYLLSFFRETLDQ
DDITRVALIGVGNLGTAFLHYNFTKNNNTKIEMAFDVSEEKVGTEIGGIPVYHLDELEERLSSDIQVAILTVPATVAQSV
ADRLAETNVHGILNFTPARLNVSDNIRIHHIDLAVELQTLVYFLKNYPQ

Sequences:

>Translated_209_residues
MEQQKIPQATAKRLPLYYRFIQNLSLSGKQRVSSAELSEAVKVDSATIRRDFSYFGALGKKGYGYNVNYLLSFFRETLDQ
DDITRVALIGVGNLGTAFLHYNFTKNNNTKIEMAFDVSEEKVGTEIGGIPVYHLDELEERLSSDIQVAILTVPATVAQSV
ADRLAETNVHGILNFTPARLNVSDNIRIHHIDLAVELQTLVYFLKNYPQ
>Mature_209_residues
MEQQKIPQATAKRLPLYYRFIQNLSLSGKQRVSSAELSEAVKVDSATIRRDFSYFGALGKKGYGYNVNYLLSFFRETLDQ
DDITRVALIGVGNLGTAFLHYNFTKNNNTKIEMAFDVSEEKVGTEIGGIPVYHLDELEERLSSDIQVAILTVPATVAQSV
ADRLAETNVHGILNFTPARLNVSDNIRIHHIDLAVELQTLVYFLKNYPQ

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): REX_BACAA (C3PAU8)

Other databases:

- EMBL:   CP001598
- RefSeq:   YP_002864889.1
- ProteinModelPortal:   C3PAU8
- SMR:   C3PAU8
- EnsemblBacteria:   EBBACT00000126991
- GeneID:   7852213
- GenomeReviews:   CP001598_GR
- KEGG:   bai:BAA_0306
- GeneTree:   EBGT00050000002131
- ProtClustDB:   PRK05472
- GO:   GO:0005737
- GO:   GO:0006350
- HAMAP:   MF_01131
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991
- Gene3D:   G3DSA:3.40.50.720
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00881

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N

EC number: NA

Molecular weight: Translated: 23502; Mature: 23502

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQKIPQATAKRLPLYYRFIQNLSLSGKQRVSSAELSEAVKVDSATIRRDFSYFGALGK
CCCCCCCHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
KGYGYNVNYLLSFFRETLDQDDITRVALIGVGNLGTAFLHYNFTKNNNTKIEMAFDVSEE
CCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEEECCHH
KVGTEIGGIPVYHLDELEERLSSDIQVAILTVPATVAQSVADRLAETNVHGILNFTPARL
HHCCHHCCCCEEHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCEEE
NVSDNIRIHHIDLAVELQTLVYFLKNYPQ
ECCCCEEEEEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQQKIPQATAKRLPLYYRFIQNLSLSGKQRVSSAELSEAVKVDSATIRRDFSYFGALGK
CCCCCCCHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCC
KGYGYNVNYLLSFFRETLDQDDITRVALIGVGNLGTAFLHYNFTKNNNTKIEMAFDVSEE
CCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEEECCHH
KVGTEIGGIPVYHLDELEERLSSDIQVAILTVPATVAQSVADRLAETNVHGILNFTPARL
HHCCHHCCCCEEHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCEEE
NVSDNIRIHHIDLAVELQTLVYFLKNYPQ
ECCCCEEEEEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA