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The map label for this gene is ydiF [H]

Identifier: 49183250

GI number: 49183250

Start: 216439

End: 218319

Strand: Direct

Name: ydiF [H]

Synonym: BAS0217

Alternate gene names: 49183250

Gene position: 216439-218319 (Clockwise)

Preceding gene: 49183249

Following gene: 49183251

Centisome position: 4.14

GC content: 36.42

Gene sequence:

>1881_bases
ATGACAATTTGTAGTGTAAATAATGTAACGAAATCTTTTGGTGGAAACATCATATTTGAAAATATATCGCTTGAAATAAA
GAATGGTGAACGTGTTGGATTAGTTGGTCGTAACGGTAGCGGGAAGACAACAATCTTTCAGCTTTTAACTGGAATGGAAA
GTTTGGATGCAGGGGCCATTCATATGAAGAAAGGTACACGTATTGGTCATGTGGCACAAATTCCGAAATTTGATGAGAGT
ATGACTGTATATGAAGTATTGAGTTCCGCTTTTAAAATAGAAAAGGAATTAGAAAGAGAAATGCGTACTTTAGAAAAAGA
TATGGCGGAAGAACAGGAATCTTCTGTTTTACAAAAATTAATGGAAAGATACGGAATCATCCAAGAAAAGTTTGCGTTTC
TTGGTGGTTATGAAATCGAAGCGAACATTATGAAGGTAGCAAATGGTTTACAGGTGACAGAACTATTCCCTCGTTCATTT
TTAGAGCTAAGTGGTGGGGAACAAACAAAAGTAAGCCTTGCATACATGCTGTTGCAGAAACCAGATTTACTTTTATTAGA
TGAACCAACCAATCATTTAGATTTATTTGCCGTAGAATGGTTAGAGCAATTTTTAAAAGAATATAACGGAACGGTTATGG
TTATTTCACATGACCGCTATTTCCTTGATGAAGTTGTAACGAAGATTTTTGATTTAGAAGATGGAGAGATTCACGTGTAT
CATACAAACTATTCTCGGTTTGTTGAAGAGAAGGAAGAAAGGTTGCTTCAGGAGTTTCAAGCTTATCAAGAACAGCAAAA
GAAAATAAAGAAAATGAAAGAAGCAATTAAGCGACTACGTGAATGGGCAAATCAGGCGAATCCTCCGAATGAAGGATTGC
ATAAGAGAGCAAGAAGTATGGAGCGTGCACTGGAACGTATGCAAAAACTAAAGAAACCTATTTTAGAACGAAAACAAATA
GGACTTCAGTTTGAAGGACAAGATAGAAGTGGAAAAGATGTTGTTGTAATAAAAGAAGTGAGTAAAGGGTTTGCTGACCA
CCCCTTATTTAACGAAGTGAATTTACATGTTCGTTTTCAAGAGCGCGCGGCCATCGTTGGTCGTAATGGTACAGGAAAGA
CAACGCTATTAAAGTTGTTATTAGAAGAAATAGAACCAGACGCGGGAGAAATTAGAATTGGTAGTAGTGTGAAAATCGGT
TATTTATCCCAGCATGCGTACGGAAATATGAAAAGTGATGTATTGGAGGCTTTCAGGGAATATGTAGCTGTCACAGAGGG
AGAAGCGAGACATATATTAGCTAAGTTTTTATTTTATGGCCCAGCGGTGTTTAAGAAAGTAACACAACTGAGCGGTGGAG
AAAAAATGAGGTTAAGACTTGCGCAACTTATGTATCAAGATATCAATTTTTTAATTTTAGATGAGCCGACAAACCATCTC
GACATTGAATCAAGGGAAGTTTTAGAGGAAGCTCTTGAACAATATAATGGGACGATTTTAGCTGTTTCACATGATCGTTA
TTTTTTAAATAAGTTATTTGAAAAGACGTATTGGATTGATGAGCATAAATTATTTGAGTTTGCAGGAAACTATGCATGGG
CGCGTCAAAAGTGGGAGGAAAGGCTCGAGACGCAAGTAATAAAGCAGCAACGCCAAGGAAGAAAAAGTATTGAAACAGCC
CCTGTAAAAAAGAAAGAAGCTAGGAATATTGAGGAGATTGAAACCGAGTTAATGCATGTAGAAGAAGATATATATACGCT
TGAGTGTACAATGGAACATGTAGTTGATATTAAAAGGCTTGAACAATTATATGAAGAAAAAACGAAGAAAGAGTTGTTAC
GAGCGGAACTATATAATGAGTTAGAGAATATTGTGGAGTGA

Upstream 100 bases:

>100_bases
CACGTGTGAAAAGGGAGCTATTTAGCTTCCTTTTTCTATGTCGAAAACCATGGGGAATGTTTCTTTCCCATGGTTTTTTA
TATTGAAAGGAGTACGGAAA

Downstream 100 bases:

>100_bases
AAAATGAAAAGCGAATTCTTTCAGTTTTACTGAAGGATTCGCTTTTTTATACTGCTATTTTGCTTTAAGAGATAAATAAA
GTTGTGTTTCACGTGAAACA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 626; Mature: 625

Protein sequence:

>626_residues
MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAIHMKKGTRIGHVAQIPKFDES
MTVYEVLSSAFKIEKELEREMRTLEKDMAEEQESSVLQKLMERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSF
LELSGGEQTKVSLAYMLLQKPDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY
HTNYSRFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSMERALERMQKLKKPILERKQI
GLQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQERAAIVGRNGTGKTTLLKLLLEEIEPDAGEIRIGSSVKIG
YLSQHAYGNMKSDVLEAFREYVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL
DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHKLFEFAGNYAWARQKWEERLETQVIKQQRQGRKSIETA
PVKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKRLEQLYEEKTKKELLRAELYNELENIVE

Sequences:

>Translated_626_residues
MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAIHMKKGTRIGHVAQIPKFDES
MTVYEVLSSAFKIEKELEREMRTLEKDMAEEQESSVLQKLMERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSF
LELSGGEQTKVSLAYMLLQKPDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY
HTNYSRFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSMERALERMQKLKKPILERKQI
GLQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQERAAIVGRNGTGKTTLLKLLLEEIEPDAGEIRIGSSVKIG
YLSQHAYGNMKSDVLEAFREYVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL
DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHKLFEFAGNYAWARQKWEERLETQVIKQQRQGRKSIETA
PVKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKRLEQLYEEKTKKELLRAELYNELENIVE
>Mature_625_residues
TICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAIHMKKGTRIGHVAQIPKFDESM
TVYEVLSSAFKIEKELEREMRTLEKDMAEEQESSVLQKLMERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSFL
ELSGGEQTKVSLAYMLLQKPDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVYH
TNYSRFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSMERALERMQKLKKPILERKQIG
LQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQERAAIVGRNGTGKTTLLKLLLEEIEPDAGEIRIGSSVKIGY
LSQHAYGNMKSDVLEAFREYVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHLD
IESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHKLFEFAGNYAWARQKWEERLETQVIKQQRQGRKSIETAP
VKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKRLEQLYEEKTKKELLRAELYNELENIVE

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=522, Percent_Identity=32.183908045977, Blast_Score=256, Evalue=7e-68,
Organism=Homo sapiens, GI27881506, Length=556, Percent_Identity=30.5755395683453, Blast_Score=221, Evalue=2e-57,
Organism=Homo sapiens, GI10947137, Length=556, Percent_Identity=30.5755395683453, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI10947135, Length=528, Percent_Identity=31.25, Blast_Score=202, Evalue=6e-52,
Organism=Homo sapiens, GI69354671, Length=528, Percent_Identity=31.25, Blast_Score=202, Evalue=7e-52,
Organism=Homo sapiens, GI156105685, Length=233, Percent_Identity=29.1845493562232, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI255708477, Length=193, Percent_Identity=30.5699481865285, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI90421313, Length=155, Percent_Identity=26.4516129032258, Blast_Score=67, Evalue=7e-11,
Organism=Escherichia coli, GI1789751, Length=611, Percent_Identity=31.9148936170213, Blast_Score=299, Evalue=4e-82,
Organism=Escherichia coli, GI1787041, Length=537, Percent_Identity=34.0782122905028, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI2367384, Length=529, Percent_Identity=32.5141776937618, Blast_Score=269, Evalue=5e-73,
Organism=Escherichia coli, GI1787182, Length=553, Percent_Identity=33.6347197106691, Blast_Score=260, Evalue=2e-70,
Organism=Escherichia coli, GI1788225, Length=265, Percent_Identity=25.6603773584906, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1788165, Length=210, Percent_Identity=25.7142857142857, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1789593, Length=233, Percent_Identity=26.1802575107296, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87081791, Length=218, Percent_Identity=27.0642201834862, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1789864, Length=252, Percent_Identity=25, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI48994997, Length=246, Percent_Identity=24.390243902439, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786872, Length=266, Percent_Identity=26.6917293233083, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1786803, Length=233, Percent_Identity=24.4635193133047, Blast_Score=66, Evalue=9e-12,
Organism=Escherichia coli, GI1786345, Length=186, Percent_Identity=30.6451612903226, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=534, Percent_Identity=30.1498127340824, Blast_Score=234, Evalue=9e-62,
Organism=Caenorhabditis elegans, GI17555318, Length=562, Percent_Identity=30.4270462633452, Blast_Score=233, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI17553372, Length=523, Percent_Identity=33.6520076481836, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI193208177, Length=202, Percent_Identity=27.7227722772277, Blast_Score=74, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6321121, Length=536, Percent_Identity=33.0223880597015, Blast_Score=232, Evalue=1e-61,
Organism=Saccharomyces cerevisiae, GI6320874, Length=536, Percent_Identity=28.9179104477612, Blast_Score=225, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6325030, Length=403, Percent_Identity=26.7990074441687, Blast_Score=136, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6324314, Length=412, Percent_Identity=25.9708737864078, Blast_Score=134, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6323278, Length=416, Percent_Identity=25, Blast_Score=132, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6323217, Length=200, Percent_Identity=28, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24666836, Length=531, Percent_Identity=32.391713747646, Blast_Score=256, Evalue=3e-68,
Organism=Drosophila melanogaster, GI24642252, Length=535, Percent_Identity=31.214953271028, Blast_Score=231, Evalue=8e-61,
Organism=Drosophila melanogaster, GI18859989, Length=535, Percent_Identity=31.214953271028, Blast_Score=231, Evalue=8e-61,
Organism=Drosophila melanogaster, GI24641342, Length=562, Percent_Identity=32.5622775800712, Blast_Score=229, Evalue=5e-60,
Organism=Drosophila melanogaster, GI281363262, Length=189, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24653245, Length=189, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17136662, Length=187, Percent_Identity=28.3422459893048, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24659289, Length=182, Percent_Identity=27.4725274725275, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI62484234, Length=156, Percent_Identity=29.4871794871795, Blast_Score=66, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72695; Mature: 72564

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAI
CEEECCCHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCE
HMKKGTRIGHVAQIPKFDESMTVYEVLSSAFKIEKELEREMRTLEKDMAEEQESSVLQKL
EECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSFLELSGGEQTKVSLAYMLLQK
HHHHCCHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
PDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY
CCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEE
HTNYSRFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ERALERMQKLKKPILERKQIGLQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQ
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEHHHCCCCCCCCCCCCEEEEEEE
ERAAIVGRNGTGKTTLLKLLLEEIEPDAGEIRIGSSVKIGYLSQHAYGNMKSDVLEAFRE
CCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEHHHHCCCHHHHHHHHHHH
YVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHKLFEFAGNYAWARQKWEE
CCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH
RLETQVIKQQRQGRKSIETAPVKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKRL
HHHHHHHHHHHHCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHH
EQLYEEKTKKELLRAELYNELENIVE
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TICSVNNVTKSFGGNIIFENISLEIKNGERVGLVGRNGSGKTTIFQLLTGMESLDAGAI
EEECCCHHHHHHCCCEEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCE
HMKKGTRIGHVAQIPKFDESMTVYEVLSSAFKIEKELEREMRTLEKDMAEEQESSVLQKL
EECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MERYGIIQEKFAFLGGYEIEANIMKVANGLQVTELFPRSFLELSGGEQTKVSLAYMLLQK
HHHHCCHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
PDLLLLDEPTNHLDLFAVEWLEQFLKEYNGTVMVISHDRYFLDEVVTKIFDLEDGEIHVY
CCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEE
HTNYSRFVEEKEERLLQEFQAYQEQQKKIKKMKEAIKRLREWANQANPPNEGLHKRARSM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ERALERMQKLKKPILERKQIGLQFEGQDRSGKDVVVIKEVSKGFADHPLFNEVNLHVRFQ
HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEHHHCCCCCCCCCCCCEEEEEEE
ERAAIVGRNGTGKTTLLKLLLEEIEPDAGEIRIGSSVKIGYLSQHAYGNMKSDVLEAFRE
CCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEEHHHHCCCHHHHHHHHHHH
YVAVTEGEARHILAKFLFYGPAVFKKVTQLSGGEKMRLRLAQLMYQDINFLILDEPTNHL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
DIESREVLEEALEQYNGTILAVSHDRYFLNKLFEKTYWIDEHKLFEFAGNYAWARQKWEE
CCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHH
RLETQVIKQQRQGRKSIETAPVKKKEARNIEEIETELMHVEEDIYTLECTMEHVVDIKRL
HHHHHHHHHHHHCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHH
EQLYEEKTKKELLRAELYNELENIVE
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]