Definition Bacillus anthracis str. Sterne chromosome, complete genome.
Accession NC_005945
Length 5,228,663

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The map label for this gene is yjjV [C]

Identifier: 49183245

GI number: 49183245

Start: 211398

End: 212162

Strand: Direct

Name: yjjV [C]

Synonym: BAS0212

Alternate gene names: 49183245

Gene position: 211398-212162 (Clockwise)

Preceding gene: 49183244

Following gene: 49183247

Centisome position: 4.04

GC content: 34.12

Gene sequence:

>765_bases
ATGAAATGGATTGATAGTCATATACATGTCGACCAATACAAGGATGAAGAGAAAAGTAGATTACTGAAAGATGTGGAAAA
TAGTAAAGAGATACAGGGGCTTATTGCGGTATCTATGAATTATCAATCAAGTAAAGAAATCTTATCTTTAGCAAAACGAT
ATTCCTTTGTACATCCAGCAGTAGGTTTTCATCCGGAGCAACCGATTCATAAAGAAGAATGTGAGAAAATTTATAAATTA
ATTGAGGATCATGTAGAGGATATAGTAGCGATTGGTGAAGTAGGCTTACCGTATTACTTAAGAAAAGAAGATGAGCATAT
TGCTATCAATTCGTATATATCAGTGCTACAACGGTTTGTTGAACTAGCTAGTAAATATGATTTACCAATTGTATTGCATG
CAGTGTATGAAGATGCTGATGTTGTATGTGATTTACTGGAGAAACATAAAGTTTCGCGTGCGCACTTTCATTGGTTTAAA
GGAAGTGAAACAACAATGGAACGGATGATGAGGAACGGTTATTATATTTCTATTACACCAGATGTTTTGCATAAGGAGAA
GATTAGAAAAATTGTTTCGTATTATCCTCTTGAATATATGATGGTAGAAACAGATGGACCGTGGGGATTTCAAGAGGGTG
TTATGACACATCCGGGAATGATTCGAGAGGTATTAAAGGAAATTAGTGTTATAAAAAACGTAGCTGTTGATAAGGTTGCA
GAAACGATATATGAAAATACGATTCAATTTTATTTGAAAGGATAG

Upstream 100 bases:

>100_bases
ATTGGATTATTTGATATCATAACAAACTTAATTGTTAAATAATATAGATGACAAAACAAGAAGGGAGATCCTTTCTTGTT
TTTTTTATGGGGGAATAAAG

Downstream 100 bases:

>100_bases
AAGTGTTATTTTAGCCCTTCTTATTATAGAGAAATAGAAGTTGAATTTATTTATGAACATAATCAATGGGTTATTAATAA
TATGCCACGTTTTGGTTTTG

Product: TatD family deoxyribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MKWIDSHIHVDQYKDEEKSRLLKDVENSKEIQGLIAVSMNYQSSKEILSLAKRYSFVHPAVGFHPEQPIHKEECEKIYKL
IEDHVEDIVAIGEVGLPYYLRKEDEHIAINSYISVLQRFVELASKYDLPIVLHAVYEDADVVCDLLEKHKVSRAHFHWFK
GSETTMERMMRNGYYISITPDVLHKEKIRKIVSYYPLEYMMVETDGPWGFQEGVMTHPGMIREVLKEISVIKNVAVDKVA
ETIYENTIQFYLKG

Sequences:

>Translated_254_residues
MKWIDSHIHVDQYKDEEKSRLLKDVENSKEIQGLIAVSMNYQSSKEILSLAKRYSFVHPAVGFHPEQPIHKEECEKIYKL
IEDHVEDIVAIGEVGLPYYLRKEDEHIAINSYISVLQRFVELASKYDLPIVLHAVYEDADVVCDLLEKHKVSRAHFHWFK
GSETTMERMMRNGYYISITPDVLHKEKIRKIVSYYPLEYMMVETDGPWGFQEGVMTHPGMIREVLKEISVIKNVAVDKVA
ETIYENTIQFYLKG
>Mature_254_residues
MKWIDSHIHVDQYKDEEKSRLLKDVENSKEIQGLIAVSMNYQSSKEILSLAKRYSFVHPAVGFHPEQPIHKEECEKIYKL
IEDHVEDIVAIGEVGLPYYLRKEDEHIAINSYISVLQRFVELASKYDLPIVLHAVYEDADVVCDLLEKHKVSRAHFHWFK
GSETTMERMMRNGYYISITPDVLHKEKIRKIVSYYPLEYMMVETDGPWGFQEGVMTHPGMIREVLKEISVIKNVAVDKVA
ETIYENTIQFYLKG

Specific function: Unknown

COG id: COG0084

COG function: function code L; Mg-dependent DNase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatD DNase family [H]

Homologues:

Organism=Homo sapiens, GI110349730, Length=219, Percent_Identity=27.3972602739726, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI110349734, Length=219, Percent_Identity=27.3972602739726, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI226061853, Length=226, Percent_Identity=26.5486725663717, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI226061614, Length=212, Percent_Identity=26.4150943396226, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI226061595, Length=179, Percent_Identity=27.3743016759777, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI87082439, Length=262, Percent_Identity=25.1908396946565, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1787342, Length=261, Percent_Identity=26.0536398467433, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI48994985, Length=200, Percent_Identity=25.5, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71980746, Length=263, Percent_Identity=23.574144486692, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015992
- InterPro:   IPR001130
- InterPro:   IPR018228
- InterPro:   IPR012278 [H]

Pfam domain/function: PF01026 TatD_DNase [H]

EC number: 3.1.21.-

Molecular weight: Translated: 29696; Mature: 29696

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWIDSHIHVDQYKDEEKSRLLKDVENSKEIQGLIAVSMNYQSSKEILSLAKRYSFVHPA
CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCC
VGFHPEQPIHKEECEKIYKLIEDHVEDIVAIGEVGLPYYLRKEDEHIAINSYISVLQRFV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEHHHHHHHHHHHHH
ELASKYDLPIVLHAVYEDADVVCDLLEKHKVSRAHFHWFKGSETTMERMMRNGYYISITP
HHHHCCCCCEEHHHHHCCHHHHHHHHHHHCCHHHHHEEECCCHHHHHHHHHCCEEEEECH
DVLHKEKIRKIVSYYPLEYMMVETDGPWGFQEGVMTHPGMIREVLKEISVIKNVAVDKVA
HHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ETIYENTIQFYLKG
HHHHHHHHHHEECC
>Mature Secondary Structure
MKWIDSHIHVDQYKDEEKSRLLKDVENSKEIQGLIAVSMNYQSSKEILSLAKRYSFVHPA
CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCC
VGFHPEQPIHKEECEKIYKLIEDHVEDIVAIGEVGLPYYLRKEDEHIAINSYISVLQRFV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEHHHHHHHHHHHHH
ELASKYDLPIVLHAVYEDADVVCDLLEKHKVSRAHFHWFKGSETTMERMMRNGYYISITP
HHHHCCCCCEEHHHHHCCHHHHHHHHHHHCCHHHHHEEECCCHHHHHHHHHCCEEEEECH
DVLHKEKIRKIVSYYPLEYMMVETDGPWGFQEGVMTHPGMIREVLKEISVIKNVAVDKVA
HHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ETIYENTIQFYLKG
HHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]