Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is ctsR [H]
Identifier: 49183112
GI number: 49183112
Start: 87416
End: 87877
Strand: Direct
Name: ctsR [H]
Synonym: BAS0078
Alternate gene names: 49183112
Gene position: 87416-87877 (Clockwise)
Preceding gene: 49183111
Following gene: 49183113
Centisome position: 1.67
GC content: 33.33
Gene sequence:
>462_bases ATGAGAAATATATCTGATATCATTGAGCAATATCTAAAGCAAGTTATTGACTTAAGTAATAATAATGTGATTGAAATCAA AAGAAATGAGATTGCGGATCGATTCGAGTGCGTACCATCTCAAATCAATTATGTAATCAATACCCGTTTTACGTTAGAAA GAGGATTTGTAGTAGAAAGTAAACGTGGTGGAGGAGGTTACATTCGCATTATAAAAGTCAAACTGCATGATGATATAGAC ATTATTGATCAAATGCTTCATATGATTGATCATAGCGTTGCGCAAGGGAATGCAGAAAGTATGATTATACGTTTAATAGA AGAGGGAATCATAACAAATCGTGAAGCTAAACTTATGCTAAGCGTACTAGATCGTTCTGTATTATCAATGGATGTTCCTT CTCGAGATGAACTTAGGGCTCGAATATTATGCGCAATGTTAAGAACACTGAAATATAAATAA
Upstream 100 bases:
>100_bases ATGTGGCTAGGATAGTAAATAAGCAAAAGAGTTGCAAATTTTATTAATACGTATATAATTAAAGTCAAAGATAGTCAAAG TCAATAAAGGTGGCGGATAA
Downstream 100 bases:
>100_bases ATACAGCTTTTGTAAAAGGATAATAACTAAGAGATAAGATAGCTAAATATTGTAGAGGTTTTGAAAAAAGAACACGCACT TTTATGTAAACGAATAAAGG
Product: transcriptional regulator CtsR
Products: NA
Alternate protein names: Class three stress gene repressor [H]
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRNISDIIEQYLKQVIDLSNNNVIEIKRNEIADRFECVPSQINYVINTRFTLERGFVVESKRGGGGYIRIIKVKLHDDID IIDQMLHMIDHSVAQGNAESMIIRLIEEGIITNREAKLMLSVLDRSVLSMDVPSRDELRARILCAMLRTLKYK
Sequences:
>Translated_153_residues MRNISDIIEQYLKQVIDLSNNNVIEIKRNEIADRFECVPSQINYVINTRFTLERGFVVESKRGGGGYIRIIKVKLHDDID IIDQMLHMIDHSVAQGNAESMIIRLIEEGIITNREAKLMLSVLDRSVLSMDVPSRDELRARILCAMLRTLKYK >Mature_153_residues MRNISDIIEQYLKQVIDLSNNNVIEIKRNEIADRFECVPSQINYVINTRFTLERGFVVESKRGGGGYIRIIKVKLHDDID IIDQMLHMIDHSVAQGNAESMIIRLIEEGIITNREAKLMLSVLDRSVLSMDVPSRDELRARILCAMLRTLKYK
Specific function: Controls the expression of the cellular protein quality control genes clpC, clpE and clpP. Acts as a repressor of these class III stress genes by binding to a directly repeated heptanucleotide operator sequence (A/GGTCAAA NAN A/GGTCAAA). After heat shock,
COG id: COG4463
COG function: function code K; Transcriptional repressor of class III stress genes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CtsR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008463 [H]
Pfam domain/function: PF05848 CtsR [H]
EC number: NA
Molecular weight: Translated: 17674; Mature: 17674
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNISDIIEQYLKQVIDLSNNNVIEIKRNEIADRFECVPSQINYVINTRFTLERGFVVES CCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCHHHCCEEEECEEEEECCEEEEC KRGGGGYIRIIKVKLHDDIDIIDQMLHMIDHSVAQGNAESMIIRLIEEGIITNREAKLML CCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHH SVLDRSVLSMDVPSRDELRARILCAMLRTLKYK HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRNISDIIEQYLKQVIDLSNNNVIEIKRNEIADRFECVPSQINYVINTRFTLERGFVVES CCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCHHHCCEEEECEEEEECCEEEEC KRGGGGYIRIIKVKLHDDIDIIDQMLHMIDHSVAQGNAESMIIRLIEEGIITNREAKLML CCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHH SVLDRSVLSMDVPSRDELRARILCAMLRTLKYK HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]