Definition Bacillus anthracis str. Sterne chromosome, complete genome.
Accession NC_005945
Length 5,228,663

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The map label for this gene is pth

Identifier: 49183085

GI number: 49183085

Start: 53564

End: 54124

Strand: Direct

Name: pth

Synonym: BAS0050

Alternate gene names: 49183085

Gene position: 53564-54124 (Clockwise)

Preceding gene: 49183084

Following gene: 49183086

Centisome position: 1.02

GC content: 34.4

Gene sequence:

>561_bases
ATGAAATTGATAGTAGGACTTGGGAACCCGGGTAGAGAATATGAATTAACAAGGCATAATATTGGATTTATGGCGATTGA
TGAACTTGCAAAGCGTTGGAATATTTCTTTGAACGAACAAAAGTTTAAAGGCTTATTTGGTGCAGGATTTGTTAATGGAG
AAAAAGTAATCTTATTAAAGCCACTTACATATATGAATTTATCTGGGGAAAGTATTCGTCCGCTAATGGATTACTATAAA
ATTGATGTAGAGGACTTCGTTGTTCTGTACGATGATTTAGATATCCCTGTAGGTAAATTACGCCTTCGTATGAAAGGTAG
TGCTGGTGGACATAATGGTGTGAAATCAACAATTTCACATTTAGGAACACAAGAGTTTCAACGTATCCGCATGGGAATTG
ATCGTCCGAAAAATGGAATGAAGGTAGTAGATTATGTATTAGGACGTTTTACATCGGAAGAAATTCCTGATGTAAATCAT
TCTATTGAAAAAGCAGCAGATGCATGTGAAGAATGGTTAAATAAACCTTTTCTTCAAATCATGAATACTTTCAATAGTTA
A

Upstream 100 bases:

>100_bases
AGAATCTGTAAGTGTATTATTCAATTAATTGGATAGAATGAGACGTAACCAAGATTGGTTACGTCTTTTCGTATCGAAAA
AAGAAAGTAGTGGTACAAGA

Downstream 100 bases:

>100_bases
GGGTATGATTAGGAATATTTTATTCTGTTTTTACCCATACTAGCAGTAAATGTATTTTTAGGAGGCTAGTATGGAAGGGT
ATTATTATTGCAGACATTGC

Product: peptidyl-tRNA hydrolase

Products: NA

Alternate protein names: PTH

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYK
IDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNH
SIEKAADACEEWLNKPFLQIMNTFNS

Sequences:

>Translated_186_residues
MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYK
IDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNH
SIEKAADACEEWLNKPFLQIMNTFNS
>Mature_186_residues
MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLKPLTYMNLSGESIRPLMDYYK
IDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISHLGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNH
SIEKAADACEEWLNKPFLQIMNTFNS

Specific function: The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis

COG id: COG0193

COG function: function code J; Peptidyl-tRNA hydrolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTH family

Homologues:

Organism=Homo sapiens, GI50897284, Length=168, Percent_Identity=32.1428571428571, Blast_Score=103, Evalue=1e-22,
Organism=Escherichia coli, GI1787455, Length=188, Percent_Identity=39.3617021276596, Blast_Score=122, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6321983, Length=176, Percent_Identity=29.5454545454545, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PTH_BACAN (Q81VY9)

Other databases:

- EMBL:   AE016879
- EMBL:   AE017334
- EMBL:   AE017225
- RefSeq:   NP_842619.1
- RefSeq:   YP_016653.1
- RefSeq:   YP_026337.1
- ProteinModelPortal:   Q81VY9
- SMR:   Q81VY9
- EnsemblBacteria:   EBBACT00000008195
- EnsemblBacteria:   EBBACT00000017228
- EnsemblBacteria:   EBBACT00000022310
- GeneID:   1087397
- GeneID:   2819040
- GeneID:   2853113
- GenomeReviews:   AE016879_GR
- GenomeReviews:   AE017225_GR
- GenomeReviews:   AE017334_GR
- KEGG:   ban:BA_0050
- KEGG:   bar:GBAA_0050
- KEGG:   bat:BAS0050
- TIGR:   BA_0050
- TIGR:   GBAA_0050
- GeneTree:   EBGT00050000001189
- HOGENOM:   HBG610927
- OMA:   NESGRQV
- ProtClustDB:   PRK05426
- BioCyc:   BANT260799:BAS0050-MONOMER
- BioCyc:   BANT261594:GBAA0050-MONOMER
- BRENDA:   3.1.1.29
- GO:   GO:0005737
- GO:   GO:0006412
- HAMAP:   MF_00083
- InterPro:   IPR001328
- InterPro:   IPR018171
- Gene3D:   G3DSA:3.40.50.1470
- PANTHER:   PTHR17224
- TIGRFAMs:   TIGR00447

Pfam domain/function: PF01195 Pept_tRNA_hydro; SSF53178 Pept_tRNA_hydro

EC number: =3.1.1.29

Molecular weight: Translated: 21097; Mature: 21097

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS01195 PEPT_TRNA_HYDROL_1; PS01196 PEPT_TRNA_HYDROL_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLK
CEEEEECCCCCCCEEEHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCEEEEEC
PLTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISH
CCEEECCCCCCHHHHHHHHHCCHHHEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHH
LGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI
HCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH
MNTFNS
HHHHCC
>Mature Secondary Structure
MKLIVGLGNPGREYELTRHNIGFMAIDELAKRWNISLNEQKFKGLFGAGFVNGEKVILLK
CEEEEECCCCCCCEEEHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCEEEEEC
PLTYMNLSGESIRPLMDYYKIDVEDFVVLYDDLDIPVGKLRLRMKGSAGGHNGVKSTISH
CCEEECCCCCCHHHHHHHHHCCHHHEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHH
LGTQEFQRIRMGIDRPKNGMKVVDYVLGRFTSEEIPDVNHSIEKAADACEEWLNKPFLQI
HCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH
MNTFNS
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629