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The map label for this gene is ipk [H]

Identifier: 49183079

GI number: 49183079

Start: 48093

End: 48971

Strand: Direct

Name: ipk [H]

Synonym: BAS0044

Alternate gene names: 49183079

Gene position: 48093-48971 (Clockwise)

Preceding gene: 49183078

Following gene: 49183080

Centisome position: 0.92

GC content: 38.23

Gene sequence:

>879_bases
GTGAATAGATTGAAGCTACTAGTGAAAGCACCAGCAAAGATTAATCTGTCGTTAGATGTACTGGGAAAAAGACAAGACGG
ATATCATGAAGTGAAAATGATTATGACAACAATCGATTTAGCGGATCGTTTAGAACTAATGGAATTAGCAGAAGACCGTA
TTGAAATTTTATCCCATAATCGGTATGTCCCAGACGACCAAAGAAATCTGGCTTATCAAGCAGCGAAATTATTAAAAGAG
AAGTTTAATGTGAAAAAAGGTGTATCTATTACTATTGAAAAAACGATTCCAGTAGCAGCTGGATTAGCGGGTGGAAGTAG
TGATGCAGCAGCGACATTACGTGGTCTTAATAAATTATGGAATTTAGGCCTTACGATTGATCAATTAGCAGAGCTTGGCG
CAGAAATTGGATCAGATGTATCGTTTTGTGTATATGGTGGGACAGCAATTGCCACTGGAAGAGGAGAGCAGATTGAGCAC
ATAAAAACTCCACCTTCTTGTTGGGTTATTTTAGCAAAGCCTCATATTGGTGTATTTACTGCTGATGTATATGGAAATTT
AAAGTTAAATCGAGTTACACATCCAAATGTAGATAAAATGGTGGATGTCATAAACGCTGGAGACTACAAAGGGATTTGCG
ATACTGTTGGTAACGTTTTAGAAGATGTAACGTTTGCTATGCATCCTGAAGTTGCACGTATTAAAGCACAAATGAAGCGA
TTTGGAGCAGATGCTGTATTAATGAGTGGAAGTGGTCCAACTGTATTCGGCCTAGTGCACCATGATTCGCGAATGCATCG
TATATATAACGGATTAAAAGGATTTTGTGAACAAGTATACGCAGTACGTTTATTAGGAGAGCGAGAAACGCTTGAATAA

Upstream 100 bases:

>100_bases
GTTTCATTCTGAATGCTTTTCGTTATAATTAGGGAAGTGTCATCGTCTTACTATAAATTTATGGTAAAATAAACGATAAA
AGATTGAGTACATAGAGTGG

Downstream 100 bases:

>100_bases
AGACGTATAATACGTTATGATTTGTTTAGAATATTCGTGATTTGAGGTGAGAGTATGAAAATTAGACGAAGTACAAGATT
GGTCGATATGACTTATTACT

Product: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase

Products: NA

Alternate protein names: CMK; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNRLKLLVKAPAKINLSLDVLGKRQDGYHEVKMIMTTIDLADRLELMELAEDRIEILSHNRYVPDDQRNLAYQAAKLLKE
KFNVKKGVSITIEKTIPVAAGLAGGSSDAAATLRGLNKLWNLGLTIDQLAELGAEIGSDVSFCVYGGTAIATGRGEQIEH
IKTPPSCWVILAKPHIGVFTADVYGNLKLNRVTHPNVDKMVDVINAGDYKGICDTVGNVLEDVTFAMHPEVARIKAQMKR
FGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKGFCEQVYAVRLLGERETLE

Sequences:

>Translated_292_residues
MNRLKLLVKAPAKINLSLDVLGKRQDGYHEVKMIMTTIDLADRLELMELAEDRIEILSHNRYVPDDQRNLAYQAAKLLKE
KFNVKKGVSITIEKTIPVAAGLAGGSSDAAATLRGLNKLWNLGLTIDQLAELGAEIGSDVSFCVYGGTAIATGRGEQIEH
IKTPPSCWVILAKPHIGVFTADVYGNLKLNRVTHPNVDKMVDVINAGDYKGICDTVGNVLEDVTFAMHPEVARIKAQMKR
FGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKGFCEQVYAVRLLGERETLE
>Mature_292_residues
MNRLKLLVKAPAKINLSLDVLGKRQDGYHEVKMIMTTIDLADRLELMELAEDRIEILSHNRYVPDDQRNLAYQAAKLLKE
KFNVKKGVSITIEKTIPVAAGLAGGSSDAAATLRGLNKLWNLGLTIDQLAELGAEIGSDVSFCVYGGTAIATGRGEQIEH
IKTPPSCWVILAKPHIGVFTADVYGNLKLNRVTHPNVDKMVDVINAGDYKGICDTVGNVLEDVTFAMHPEVARIKAQMKR
FGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKGFCEQVYAVRLLGERETLE

Specific function: Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol [H]

COG id: COG1947

COG function: function code I; 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GHMP kinase family. IspE subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787459, Length=215, Percent_Identity=33.0232558139535, Blast_Score=107, Evalue=8e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006204
- InterPro:   IPR013750
- InterPro:   IPR004424
- InterPro:   IPR020568
- InterPro:   IPR014721 [H]

Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]

EC number: =2.7.1.148 [H]

Molecular weight: Translated: 32037; Mature: 32037

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLKLLVKAPAKINLSLDVLGKRQDGYHEVKMIMTTIDLADRLELMELAEDRIEILSHN
CCCEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RYVPDDQRNLAYQAAKLLKEKFNVKKGVSITIEKTIPVAAGLAGGSSDAAATLRGLNKLW
CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHH
NLGLTIDQLAELGAEIGSDVSFCVYGGTAIATGRGEQIEHIKTPPSCWVILAKPHIGVFT
HCCCCHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCHHHCCCCCCEEEEEECCCCCEEE
ADVYGNLKLNRVTHPNVDKMVDVINAGDYKGICDTVGNVLEDVTFAMHPEVARIKAQMKR
EEEECCEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKGFCEQVYAVRLLGERETLE
CCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRLKLLVKAPAKINLSLDVLGKRQDGYHEVKMIMTTIDLADRLELMELAEDRIEILSHN
CCCEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RYVPDDQRNLAYQAAKLLKEKFNVKKGVSITIEKTIPVAAGLAGGSSDAAATLRGLNKLW
CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHH
NLGLTIDQLAELGAEIGSDVSFCVYGGTAIATGRGEQIEHIKTPPSCWVILAKPHIGVFT
HCCCCHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCHHHCCCCCCEEEEEECCCCCEEE
ADVYGNLKLNRVTHPNVDKMVDVINAGDYKGICDTVGNVLEDVTFAMHPEVARIKAQMKR
EEEECCEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
FGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKGFCEQVYAVRLLGERETLE
CCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA