Click here to switch to the map view.

The map label for this gene is sspF [H]

Identifier: 49183078

GI number: 49183078

Start: 47726

End: 47905

Strand: Direct

Name: sspF [H]

Synonym: BAS0043

Alternate gene names: 49183078

Gene position: 47726-47905 (Clockwise)

Preceding gene: 49183077

Following gene: 49183079

Centisome position: 0.91

GC content: 39.44

Gene sequence:

>180_bases
TTGAGTAGACGAAGAGGTGTCATGTCAAATCAATTTAAAGAAGAGCTTGCAAAAGAGCTAGGCTTTTATGATGTTGTTCA
GAAAGAAGGATGGGGCGGAATTCGTGCGAAAGATGCTGGTAACATGGTGAAACGTGCTATAGAAATTGCAGAACAGCAAT
TAATGAAACAAAACCAGTAG

Upstream 100 bases:

>100_bases
ATTTTATAATTCATGTATCGTTACATATATTCCCACAAATGAAAAGCTATATTATTTTGCATACTAATTATACCGTAGCA
AAATAAGGGGGGACTCTGCA

Downstream 100 bases:

>100_bases
TTGTAAGATACTTTCTATGCTACGGTAGCCGAGGAATGATTCCTCGGCTTTTTGTACTATAAAAGGTGCCATCATTTTAC
ATAAGTAGTTTCATTCTGAA

Product: small, acid-soluble spore protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 58

Protein sequence:

>59_residues
MSRRRGVMSNQFKEELAKELGFYDVVQKEGWGGIRAKDAGNMVKRAIEIAEQQLMKQNQ

Sequences:

>Translated_59_residues
MSRRRGVMSNQFKEELAKELGFYDVVQKEGWGGIRAKDAGNMVKRAIEIAEQQLMKQNQ
>Mature_58_residues
SRRRGVMSNQFKEELAKELGFYDVVQKEGWGGIRAKDAGNMVKRAIEIAEQQLMKQNQ

Specific function: May play some important role in either sporulation or the dormant spore [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 6800; Mature: 6669

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS00304 SASP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRRGVMSNQFKEELAKELGFYDVVQKEGWGGIRAKDAGNMVKRAIEIAEQQLMKQNQ
CCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRRRGVMSNQFKEELAKELGFYDVVQKEGWGGIRAKDAGNMVKRAIEIAEQQLMKQNQ
CCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7959056 [H]