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The map label for this gene is tadA [H]

Identifier: 49183056

GI number: 49183056

Start: 24536

End: 25036

Strand: Direct

Name: tadA [H]

Synonym: BAS0020

Alternate gene names: 49183056

Gene position: 24536-25036 (Clockwise)

Preceding gene: 49183052

Following gene: 49183057

Centisome position: 0.47

GC content: 37.72

Gene sequence:

>501_bases
ATGGAACGTGATCAAGATATTTATTTTATGCAATTAGCAATAGAAGAGGCTAAAAAAGCAGAGGCAATACAAGAAGTACC
GATTGGTGCAGTTATAGTATTAAATGGTGAAGTAATTAGTGCTGCTCATAATTTAAGGGAAACTGAGCAAAGGTCAATAG
CTCACGCTGAGTTGTTAGCTATTGATGAGGCTTGCAAAAAATTAGGGACATGGCGTTTAGAAGATGCGACTTTATATGTA
ACATTAGAGCCTTGTCCGATGTGTGCGGGTGGAATTGTTTTATCACGAGTAAAGCGAGTCGTATATGGTGCAGGTGATCC
AAAAGGTGGATGTGCAGGGACATTGATGAATCTGTTAACGGATGAACGTTTTAATCATCAATGTGAAGTAGTAGCTGGTG
TATTAGAAGAAGAATGCGGTACGCTGTTAACAAACTTTTTTAGAGAACTTCGCAAAAAAAGAAAAGCGATCAAGAAATTA
GAGAAAAGCAACGAGAATTAA

Upstream 100 bases:

>100_bases
CCCCTCTCTTTTTTCTTAGGGTGGATTGAATTTGTAAAAGTTATCCCATGTGTAGTAAATGGAAATAAGTGTACTTTATT
TGTAATGAAAGGACTATGTT

Downstream 100 bases:

>100_bases
CGTATTTGCATTTTATAAAAAAACAAGTTATACTGATAGTGCCTTTAATGAAGGCAACCGAATATTGGTTTTAACTTTGC
CGTGCTAAGCGGGGAGGTAG

Product: cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLAIDEACKKLGTWRLEDATLYV
TLEPCPMCAGGIVLSRVKRVVYGAGDPKGGCAGTLMNLLTDERFNHQCEVVAGVLEEECGTLLTNFFRELRKKRKAIKKL
EKSNEN

Sequences:

>Translated_166_residues
MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLAIDEACKKLGTWRLEDATLYV
TLEPCPMCAGGIVLSRVKRVVYGAGDPKGGCAGTLMNLLTDERFNHQCEVVAGVLEEECGTLLTNFFRELRKKRKAIKKL
EKSNEN
>Mature_166_residues
MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLAIDEACKKLGTWRLEDATLYV
TLEPCPMCAGGIVLSRVKRVVYGAGDPKGGCAGTLMNLLTDERFNHQCEVVAGVLEEECGTLLTNFFRELRKKRKAIKKL
EKSNEN

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=151, Percent_Identity=32.4503311258278, Blast_Score=80, Evalue=9e-16,
Organism=Escherichia coli, GI145693172, Length=158, Percent_Identity=45.5696202531646, Blast_Score=142, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI17554608, Length=97, Percent_Identity=46.3917525773196, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17541138, Length=162, Percent_Identity=32.7160493827161, Blast_Score=83, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17555996, Length=79, Percent_Identity=44.3037974683544, Blast_Score=76, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6322425, Length=173, Percent_Identity=30.635838150289, Blast_Score=74, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6325319, Length=105, Percent_Identity=35.2380952380952, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355527, Length=146, Percent_Identity=29.4520547945205, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 18447; Mature: 18447

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGAGDPKGGCAGTLMNLLT
HHHHHHHHCCEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DERFNHQCEVVAGVLEEECGTLLTNFFRELRKKRKAIKKLEKSNEN
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MERDQDIYFMQLAIEEAKKAEAIQEVPIGAVIVLNGEVISAAHNLRETEQRSIAHAELLA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
IDEACKKLGTWRLEDATLYVTLEPCPMCAGGIVLSRVKRVVYGAGDPKGGCAGTLMNLLT
HHHHHHHHCCEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
DERFNHQCEVVAGVLEEECGTLLTNFFRELRKKRKAIKKLEKSNEN
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1698458; 7584024; 9384377 [H]