Definition | Bacillus anthracis str. Sterne chromosome, complete genome. |
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Accession | NC_005945 |
Length | 5,228,663 |
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The map label for this gene is dacA [H]
Identifier: 49183048
GI number: 49183048
Start: 17037
End: 18353
Strand: Direct
Name: dacA [H]
Synonym: BAS0012
Alternate gene names: 49183048
Gene position: 17037-18353 (Clockwise)
Preceding gene: 49183047
Following gene: 49183049
Centisome position: 0.33
GC content: 35.23
Gene sequence:
>1317_bases GTGAAAGGTATGTTTTGCAAAAGATTCATTGCACTAGTAACGATGCTTACACTAGTTTGTAGTATGTTGTTACCATATAG CAATGCGTCAGCAGAAACAGGATCTGCTTTAAACATTGAAGCAGGTGCGGCAATTTTAGTTGAAGCGAATTCTGGAAAAA TTTTATATCAAAAGAATGCAGATGAATTATTATCAATTGCTAGTATGACAAAGATGATGAGTGAATATTTAGTTCACGAA GCAGTGGATAAAGGGAAGCTTAAGTGGGATCAGAAAATTAAGGTTTCTGAATATGCGTATAAAGTTTCACAAGATGCTTC ATTATCAAATGTGGCATTAGAAAATGGTGGTTCTTATACGGTAAAAGAGTTGTACGAGGCAATGGCAATCTTCTCTGCAA ACGGTGCAACGATTGCATTAGCAGAAGCAATTGCAGGTAAAGAAGTAGATTTCGTAAAAATGATGAATGATAAATCGAAA GAGCTAGGGTTGAAAAATTATAAATTTGTCAATTCTACAGGTTTAACGAATAAGGATTTAAAGGGAATGCATCCAGAAGG AACAACAGCAGATGAAGAAAATAAAATGTCTGCAAAGGATGTTGCAACTTTAGCACAACATTTAATTAAAGATTATCCGA AAGTGTTAGATACAGCAAAAATCCCGAAAAAAGAATTCCGTCCAGAAAAAGAGAAGTTTGCAATGTCGAACTGGAACTGG ATGTTAAAAGGTTTAGTTAAAGAATATGATGGCGTAGATGGCCTAAAAACAGGTTCAACTCCAGAAGCAGGAGATTGCTT CACTGGTACGGTTGAAAGAAACGGTATGCGTTTTATTTCTGTAGTAATTAAAACAAGTTCTCATACAGCACGTTTTGATG AAACAAAGAAGCTATATGATTATGGATTTGCTAACTTTGAAATGAAACAAATGTATAAAAAAGGTTCTTCAGTAAAAGGA CAAGAAACAGTACGAGTAGAAAATGCGAAAGATAAGGATGTAGCAGTTCAAACGAAACAAGCCATTTCACTTCCAGTACC AAAAGGAAGTAAAGAAGTTTATAAAACAGAATTAAAAGAATCAAGTAAAGGACAAGAAGCACCTATTAAAAAAGGAGCTG CGCTTGGTCAAATGGTAATTACGCCAAAAGATACAAACGACCCTGGATTTTTAACTGGTAAGTCGTTGCAAGTGGATCTT GTAACAACATCTGAAGTAGAAGAAGCAAACTGGTTTACTCGTGCTATGCGCGGAATTGGTTCTTTCTTTAGTGGTATATG GAATAGTGCTGTTGATACAGTAAAAGGTTGGTTTTAA
Upstream 100 bases:
>100_bases TTATATACAAATAGACGGAGATTTGATATCTCTGTCTATTTTTTTTTGATTATGTTAGAATAACGGTTATGTGAGTACAT AGATATTGGGGGTAGCAAAA
Downstream 100 bases:
>100_bases AAGCTCCTCATTGTAGGGGCTTTTTCTTATTCCTATTTTTCATACCGACTTTATGAAAAAGTAGTAGACAAGCATCTGAT AGTTAGTGGTAGAATGTAAG
Product: D-alanyl-D-alanine carboxypeptidase
Products: NA
Alternate protein names: CPase; DD-carboxypeptidase; DD-peptidase; Penicillin-binding protein 5; PBP-5 [H]
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MKGMFCKRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSIASMTKMMSEYLVHE AVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYEAMAIFSANGATIALAEAIAGKEVDFVKMMNDKSK ELGLKNYKFVNSTGLTNKDLKGMHPEGTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNW MLKGLVKEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANFEMKQMYKKGSSVKG QETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQEAPIKKGAALGQMVITPKDTNDPGFLTGKSLQVDL VTTSEVEEANWFTRAMRGIGSFFSGIWNSAVDTVKGWF
Sequences:
>Translated_438_residues MKGMFCKRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSIASMTKMMSEYLVHE AVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYEAMAIFSANGATIALAEAIAGKEVDFVKMMNDKSK ELGLKNYKFVNSTGLTNKDLKGMHPEGTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNW MLKGLVKEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANFEMKQMYKKGSSVKG QETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQEAPIKKGAALGQMVITPKDTNDPGFLTGKSLQVDL VTTSEVEEANWFTRAMRGIGSFFSGIWNSAVDTVKGWF >Mature_438_residues MKGMFCKRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNADELLSIASMTKMMSEYLVHE AVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYTVKELYEAMAIFSANGATIALAEAIAGKEVDFVKMMNDKSK ELGLKNYKFVNSTGLTNKDLKGMHPEGTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNW MLKGLVKEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYDYGFANFEMKQMYKKGSSVKG QETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKESSKGQEAPIKKGAALGQMVITPKDTNDPGFLTGKSLQVDL VTTSEVEEANWFTRAMRGIGSFFSGIWNSAVDTVKGWF
Specific function: Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors [H]
COG id: COG1686
COG function: function code M; D-alanyl-D-alanine carboxypeptidase
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S11 family [H]
Homologues:
Organism=Escherichia coli, GI1787062, Length=420, Percent_Identity=30.4761904761905, Blast_Score=151, Evalue=9e-38, Organism=Escherichia coli, GI1786851, Length=441, Percent_Identity=28.3446712018141, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI87082022, Length=400, Percent_Identity=27.75, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI87082054, Length=266, Percent_Identity=26.3157894736842, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR015956 - InterPro: IPR018044 - InterPro: IPR012907 - InterPro: IPR001967 [H]
Pfam domain/function: PF07943 PBP5_C; PF00768 Peptidase_S11 [H]
EC number: =3.4.16.4 [H]
Molecular weight: Translated: 48215; Mature: 48215
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGMFCKRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEECCH DELLSIASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCHHHEEECCCCCEE VKELYEAMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDL HHHHHHHHHHHCCCCCEEEEHHHHCCCCCHHHHHHCCCHHHCCCCCEEEECCCCCCCCCC KGMHPEGTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNW CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHCCHHH MLKGLVKEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYD HHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH YGFANFEMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKE CCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEHHHHEECCCCCCCHHHHHHHHHH SSKGQEAPIKKGAALGQMVITPKDTNDPGFLTGKSLQVDLVTTSEVEEANWFTRAMRGIG CCCCCCCCHHHCCCCCCEEECCCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHH SFFSGIWNSAVDTVKGWF HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKGMFCKRFIALVTMLTLVCSMLLPYSNASAETGSALNIEAGAAILVEANSGKILYQKNA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEECCH DELLSIASMTKMMSEYLVHEAVDKGKLKWDQKIKVSEYAYKVSQDASLSNVALENGGSYT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHCCCCCHHHEEECCCCCEE VKELYEAMAIFSANGATIALAEAIAGKEVDFVKMMNDKSKELGLKNYKFVNSTGLTNKDL HHHHHHHHHHHCCCCCEEEEHHHHCCCCCHHHHHHCCCHHHCCCCCEEEECCCCCCCCCC KGMHPEGTTADEENKMSAKDVATLAQHLIKDYPKVLDTAKIPKKEFRPEKEKFAMSNWNW CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHCCHHH MLKGLVKEYDGVDGLKTGSTPEAGDCFTGTVERNGMRFISVVIKTSSHTARFDETKKLYD HHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH YGFANFEMKQMYKKGSSVKGQETVRVENAKDKDVAVQTKQAISLPVPKGSKEVYKTELKE CCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEHHHHEECCCCCCCHHHHHHHHHH SSKGQEAPIKKGAALGQMVITPKDTNDPGFLTGKSLQVDLVTTSEVEEANWFTRAMRGIG CCCCCCCCHHHCCCCCCEEECCCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHH SFFSGIWNSAVDTVKGWF HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377; 6768745; 3087956; 6780559; 111240 [H]