Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447527
Identifier: 46447527
GI number: 46447527
Start: 2255379
End: 2255945
Strand: Reverse
Name: 46447527
Synonym: pc1893
Alternate gene names: NA
Gene position: 2255945-2255379 (Counterclockwise)
Preceding gene: 46447528
Following gene: 46447526
Centisome position: 93.43
GC content: 33.69
Gene sequence:
>567_bases ATGAAGAGATATATCCTGATACCAACTCAGATCTGCAATAATCAAATGCTTCAACCCCAAAAAAATAAACGTCATTTTCA ATTGTTGGAGGTGATGATTGCGATGTTGTTGATTTTGATTTGCGTGATCCCCTCTTTTCAAATTTACGTTAACATCAATA AACAACAAGCAAATGTGATACAAGTCAATCAACGTGACCACCTTGTTCATCTAATTCATGCCGATTTAATTGAAAAATTA TACAAACAGACGATCTCTCTCGATCAAATTTTGGCTCGGTTTCAAGCTCCCTTTGAAGGAGAAGAATTAAAAAAAAAACT GGAGGAAATTGGGTATGAAGCTGTTTATTCCCTGTGTTTTCTGTCTTCCGAAAAAGATATTAAAACAGCTAAAAAATATT TAGTTGAATTGGTCATTCAACTACAAGATAAAAAGCAAGAAAGTTCGTTTGATTATACTTATCATATTTACATCGATCGA GGCGAGAGAGCTTTTAAACCAGGGTCCAAAAAACCTTTAGATTCTGAGGAAAAAGATGTTCCTGAAAAAGAACATGCTAC TGAATAA
Upstream 100 bases:
>100_bases ATTTATTTACGTGGTTATCCCAGTCCCATTGGAAGGCAACCCCCCGGAGAAGAAATGGATAAAATAGAAGAAAGCCAACG TCTTTATCCTGCAGAAATCT
Downstream 100 bases:
>100_bases AGGAAGAGCTAGAGAGTTTTCTTCTGAGTTTGTTAAGCATCGCAAACAATATTTTACTTTGCTTGAAACATTAATTGCCA TGTTGTTGCTTTCCCTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKRYILIPTQICNNQMLQPQKNKRHFQLLEVMIAMLLILICVIPSFQIYVNINKQQANVIQVNQRDHLVHLIHADLIEKL YKQTISLDQILARFQAPFEGEELKKKLEEIGYEAVYSLCFLSSEKDIKTAKKYLVELVIQLQDKKQESSFDYTYHIYIDR GERAFKPGSKKPLDSEEKDVPEKEHATE
Sequences:
>Translated_188_residues MKRYILIPTQICNNQMLQPQKNKRHFQLLEVMIAMLLILICVIPSFQIYVNINKQQANVIQVNQRDHLVHLIHADLIEKL YKQTISLDQILARFQAPFEGEELKKKLEEIGYEAVYSLCFLSSEKDIKTAKKYLVELVIQLQDKKQESSFDYTYHIYIDR GERAFKPGSKKPLDSEEKDVPEKEHATE >Mature_188_residues MKRYILIPTQICNNQMLQPQKNKRHFQLLEVMIAMLLILICVIPSFQIYVNINKQQANVIQVNQRDHLVHLIHADLIEKL YKQTISLDQILARFQAPFEGEELKKKLEEIGYEAVYSLCFLSSEKDIKTAKKYLVELVIQLQDKKQESSFDYTYHIYIDR GERAFKPGSKKPLDSEEKDVPEKEHATE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22109; Mature: 22109
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYILIPTQICNNQMLQPQKNKRHFQLLEVMIAMLLILICVIPSFQIYVNINKQQANVI CCCEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEE QVNQRDHLVHLIHADLIEKLYKQTISLDQILARFQAPFEGEELKKKLEEIGYEAVYSLCF EECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LSSEKDIKTAKKYLVELVIQLQDKKQESSFDYTYHIYIDRGERAFKPGSKKPLDSEEKDV HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC PEKEHATE CCCCCCCC >Mature Secondary Structure MKRYILIPTQICNNQMLQPQKNKRHFQLLEVMIAMLLILICVIPSFQIYVNINKQQANVI CCCEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEE QVNQRDHLVHLIHADLIEKLYKQTISLDQILARFQAPFEGEELKKKLEEIGYEAVYSLCF EECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LSSEKDIKTAKKYLVELVIQLQDKKQESSFDYTYHIYIDRGERAFKPGSKKPLDSEEKDV HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC PEKEHATE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA