Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447526

Identifier: 46447526

GI number: 46447526

Start: 2254613

End: 2255410

Strand: Reverse

Name: 46447526

Synonym: pc1892

Alternate gene names: NA

Gene position: 2255410-2254613 (Counterclockwise)

Preceding gene: 46447527

Following gene: 46447525

Centisome position: 93.41

GC content: 35.21

Gene sequence:

>798_bases
ATGTTCCTGAAAAAGAACATGCTACTGAATAAAGGAAGAGCTAGAGAGTTTTCTTCTGAGTTTGTTAAGCATCGCAAACA
ATATTTTACTTTGCTTGAAACATTAATTGCCATGTTGTTGCTTTCCCTTTTACTGACACTTATCTTTGGTTTTTTTCGAG
AGCTTTCTTTGATTGATACTTGGACGGAGGAAAGAGAAAAAGAAAGTTTTCAAATGCGTTACACGGAAACTCGTTTAAAT
TATTTATTTCAACGACTTGTCAATGAAAATCAAGGCACTATTAGACGATTTTACTTTTATACTCAACCTCCTGACGATCA
TATTTCTAATGCCCCTAGTCTCATTTTTACTTTTAATAACGAAACGCGAGCTAATCCTAATTTTTCTACCGACATATTAG
CTAGGCTGTATGTTGATCAACAACATCGTCTTGCTTTGGCTATGTGGCCAATTTATTCAGACAAACCTTATCAAGAGATG
CAAAAAGAAATTTTATTAGAAAATGTGGAAAGTATCAATTTTGACTTTTACGCTGCTCCTGAGCGCTTTTCCAATATTCA
TCCGATTAATCCTATGCAGCCATATCCTGAAAAGAAAACCCCAGAAAAAAATCAATGGCATCAGGAATGGTTTAAAACCT
ATTCACAAATGCCTTCCATATTGCGTTTAGAAGTTGACGTGGCTACTAATCCACAAGCGCTAAATAAACGAGCAGGTAAA
ATTGAAACGAAGACTTTGAAGTTTGCGTTTGTCTTGCCCTCTAGCCAAAATTATATTTTTTATTCATCCGAGGGTTGA

Upstream 100 bases:

>100_bases
CAAGAAAGTTCGTTTGATTATACTTATCATATTTACATCGATCGAGGCGAGAGAGCTTTTAAACCAGGGTCCAAAAAACC
TTTAGATTCTGAGGAAAAAG

Downstream 100 bases:

>100_bases
TATGAATGTATTACCTCTCGTTTTAATGCTTATTCTAATGACAGCTGTTATCACAGTGGAAAAATTAGAAAAATTTAAAT
CTACAGTTATTGTTCAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MFLKKNMLLNKGRAREFSSEFVKHRKQYFTLLETLIAMLLLSLLLTLIFGFFRELSLIDTWTEEREKESFQMRYTETRLN
YLFQRLVNENQGTIRRFYFYTQPPDDHISNAPSLIFTFNNETRANPNFSTDILARLYVDQQHRLALAMWPIYSDKPYQEM
QKEILLENVESINFDFYAAPERFSNIHPINPMQPYPEKKTPEKNQWHQEWFKTYSQMPSILRLEVDVATNPQALNKRAGK
IETKTLKFAFVLPSSQNYIFYSSEG

Sequences:

>Translated_265_residues
MFLKKNMLLNKGRAREFSSEFVKHRKQYFTLLETLIAMLLLSLLLTLIFGFFRELSLIDTWTEEREKESFQMRYTETRLN
YLFQRLVNENQGTIRRFYFYTQPPDDHISNAPSLIFTFNNETRANPNFSTDILARLYVDQQHRLALAMWPIYSDKPYQEM
QKEILLENVESINFDFYAAPERFSNIHPINPMQPYPEKKTPEKNQWHQEWFKTYSQMPSILRLEVDVATNPQALNKRAGK
IETKTLKFAFVLPSSQNYIFYSSEG
>Mature_265_residues
MFLKKNMLLNKGRAREFSSEFVKHRKQYFTLLETLIAMLLLSLLLTLIFGFFRELSLIDTWTEEREKESFQMRYTETRLN
YLFQRLVNENQGTIRRFYFYTQPPDDHISNAPSLIFTFNNETRANPNFSTDILARLYVDQQHRLALAMWPIYSDKPYQEM
QKEILLENVESINFDFYAAPERFSNIHPINPMQPYPEKKTPEKNQWHQEWFKTYSQMPSILRLEVDVATNPQALNKRAGK
IETKTLKFAFVLPSSQNYIFYSSEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31649; Mature: 31649

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKKNMLLNKGRAREFSSEFVKHRKQYFTLLETLIAMLLLSLLLTLIFGFFRELSLIDT
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTEEREKESFQMRYTETRLNYLFQRLVNENQGTIRRFYFYTQPPDDHISNAPSLIFTFNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHCCCCCEEEEECC
ETRANPNFSTDILARLYVDQQHRLALAMWPIYSDKPYQEMQKEILLENVESINFDFYAAP
CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECH
ERFSNIHPINPMQPYPEKKTPEKNQWHQEWFKTYSQMPSILRLEVDVATNPQALNKRAGK
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCC
IETKTLKFAFVLPSSQNYIFYSSEG
CEEEEEEEEEEEECCCCEEEEECCC
>Mature Secondary Structure
MFLKKNMLLNKGRAREFSSEFVKHRKQYFTLLETLIAMLLLSLLLTLIFGFFRELSLIDT
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WTEEREKESFQMRYTETRLNYLFQRLVNENQGTIRRFYFYTQPPDDHISNAPSLIFTFNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHCCCCCEEEEECC
ETRANPNFSTDILARLYVDQQHRLALAMWPIYSDKPYQEMQKEILLENVESINFDFYAAP
CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECH
ERFSNIHPINPMQPYPEKKTPEKNQWHQEWFKTYSQMPSILRLEVDVATNPQALNKRAGK
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCC
IETKTLKFAFVLPSSQNYIFYSSEG
CEEEEEEEEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA