Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
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Accession | NC_005861 |
Length | 2,414,465 |
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The map label for this gene is 46447526
Identifier: 46447526
GI number: 46447526
Start: 2254613
End: 2255410
Strand: Reverse
Name: 46447526
Synonym: pc1892
Alternate gene names: NA
Gene position: 2255410-2254613 (Counterclockwise)
Preceding gene: 46447527
Following gene: 46447525
Centisome position: 93.41
GC content: 35.21
Gene sequence:
>798_bases ATGTTCCTGAAAAAGAACATGCTACTGAATAAAGGAAGAGCTAGAGAGTTTTCTTCTGAGTTTGTTAAGCATCGCAAACA ATATTTTACTTTGCTTGAAACATTAATTGCCATGTTGTTGCTTTCCCTTTTACTGACACTTATCTTTGGTTTTTTTCGAG AGCTTTCTTTGATTGATACTTGGACGGAGGAAAGAGAAAAAGAAAGTTTTCAAATGCGTTACACGGAAACTCGTTTAAAT TATTTATTTCAACGACTTGTCAATGAAAATCAAGGCACTATTAGACGATTTTACTTTTATACTCAACCTCCTGACGATCA TATTTCTAATGCCCCTAGTCTCATTTTTACTTTTAATAACGAAACGCGAGCTAATCCTAATTTTTCTACCGACATATTAG CTAGGCTGTATGTTGATCAACAACATCGTCTTGCTTTGGCTATGTGGCCAATTTATTCAGACAAACCTTATCAAGAGATG CAAAAAGAAATTTTATTAGAAAATGTGGAAAGTATCAATTTTGACTTTTACGCTGCTCCTGAGCGCTTTTCCAATATTCA TCCGATTAATCCTATGCAGCCATATCCTGAAAAGAAAACCCCAGAAAAAAATCAATGGCATCAGGAATGGTTTAAAACCT ATTCACAAATGCCTTCCATATTGCGTTTAGAAGTTGACGTGGCTACTAATCCACAAGCGCTAAATAAACGAGCAGGTAAA ATTGAAACGAAGACTTTGAAGTTTGCGTTTGTCTTGCCCTCTAGCCAAAATTATATTTTTTATTCATCCGAGGGTTGA
Upstream 100 bases:
>100_bases CAAGAAAGTTCGTTTGATTATACTTATCATATTTACATCGATCGAGGCGAGAGAGCTTTTAAACCAGGGTCCAAAAAACC TTTAGATTCTGAGGAAAAAG
Downstream 100 bases:
>100_bases TATGAATGTATTACCTCTCGTTTTAATGCTTATTCTAATGACAGCTGTTATCACAGTGGAAAAATTAGAAAAATTTAAAT CTACAGTTATTGTTCAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MFLKKNMLLNKGRAREFSSEFVKHRKQYFTLLETLIAMLLLSLLLTLIFGFFRELSLIDTWTEEREKESFQMRYTETRLN YLFQRLVNENQGTIRRFYFYTQPPDDHISNAPSLIFTFNNETRANPNFSTDILARLYVDQQHRLALAMWPIYSDKPYQEM QKEILLENVESINFDFYAAPERFSNIHPINPMQPYPEKKTPEKNQWHQEWFKTYSQMPSILRLEVDVATNPQALNKRAGK IETKTLKFAFVLPSSQNYIFYSSEG
Sequences:
>Translated_265_residues MFLKKNMLLNKGRAREFSSEFVKHRKQYFTLLETLIAMLLLSLLLTLIFGFFRELSLIDTWTEEREKESFQMRYTETRLN YLFQRLVNENQGTIRRFYFYTQPPDDHISNAPSLIFTFNNETRANPNFSTDILARLYVDQQHRLALAMWPIYSDKPYQEM QKEILLENVESINFDFYAAPERFSNIHPINPMQPYPEKKTPEKNQWHQEWFKTYSQMPSILRLEVDVATNPQALNKRAGK IETKTLKFAFVLPSSQNYIFYSSEG >Mature_265_residues MFLKKNMLLNKGRAREFSSEFVKHRKQYFTLLETLIAMLLLSLLLTLIFGFFRELSLIDTWTEEREKESFQMRYTETRLN YLFQRLVNENQGTIRRFYFYTQPPDDHISNAPSLIFTFNNETRANPNFSTDILARLYVDQQHRLALAMWPIYSDKPYQEM QKEILLENVESINFDFYAAPERFSNIHPINPMQPYPEKKTPEKNQWHQEWFKTYSQMPSILRLEVDVATNPQALNKRAGK IETKTLKFAFVLPSSQNYIFYSSEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31649; Mature: 31649
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLKKNMLLNKGRAREFSSEFVKHRKQYFTLLETLIAMLLLSLLLTLIFGFFRELSLIDT CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WTEEREKESFQMRYTETRLNYLFQRLVNENQGTIRRFYFYTQPPDDHISNAPSLIFTFNN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHCCCCCEEEEECC ETRANPNFSTDILARLYVDQQHRLALAMWPIYSDKPYQEMQKEILLENVESINFDFYAAP CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECH ERFSNIHPINPMQPYPEKKTPEKNQWHQEWFKTYSQMPSILRLEVDVATNPQALNKRAGK HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCC IETKTLKFAFVLPSSQNYIFYSSEG CEEEEEEEEEEEECCCCEEEEECCC >Mature Secondary Structure MFLKKNMLLNKGRAREFSSEFVKHRKQYFTLLETLIAMLLLSLLLTLIFGFFRELSLIDT CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WTEEREKESFQMRYTETRLNYLFQRLVNENQGTIRRFYFYTQPPDDHISNAPSLIFTFNN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHCCCCCEEEEECC ETRANPNFSTDILARLYVDQQHRLALAMWPIYSDKPYQEMQKEILLENVESINFDFYAAP CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECH ERFSNIHPINPMQPYPEKKTPEKNQWHQEWFKTYSQMPSILRLEVDVATNPQALNKRAGK HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCC IETKTLKFAFVLPSSQNYIFYSSEG CEEEEEEEEEEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA